RNA–Protein interactions for RNA: ENST00000557514.1

TRAV33-201, Transcript of T cell receptor alpha variable 33 (pseudogene), humanhuman

BASIC

Gene TRAV33, Length 338 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV33-201ENST00000557514 KRTAP1-5Q9BYS1 174 aa7.29□□□□□ -1.24
TRAV33-201ENST00000557514 NXF2Q9GZY0 626 aaKnown RBP7.29□□□□□ -1.24
TRAV33-201ENST00000557514 HRASLSQ9HDD0 168 aa7.29□□□□□ -1.24
TRAV33-201ENST00000557514 TAS2R8Q9NYW2 309 aa7.29□□□□□ -1.24
TRAV33-201ENST00000557514 RABAC1Q9UI14 185 aa7.29□□□□□ -1.24
TRAV33-201ENST00000557514 SPATA2Q9UM82 520 aa7.29□□□□□ -1.24
TRAV33-201ENST00000557514 OR2W1Q9Y3N9 320 aa7.29□□□□□ -1.24
TRAV33-201ENST00000557514 IGHV3-66A0A0C4DH42 116 aa7.28□□□□□ -1.24
TRAV33-201ENST00000557514 J3QRK9 145 aa7.28□□□□□ -1.24
TRAV33-201ENST00000557514 UPK2O00526 184 aa7.28□□□□□ -1.24
TRAV33-201ENST00000557514 MFNGO00587 321 aa7.28□□□□□ -1.24
TRAV33-201ENST00000557514 RPL11P62913 178 aaKnown RBP7.28□□□□□ -1.24
TRAV33-201ENST00000557514 GNGT1P63211 74 aa7.28□□□□□ -1.24
TRAV33-201ENST00000557514 DCANP1Q8TF63 244 aa7.28□□□□□ -1.24
TRAV33-201ENST00000557514 CENPOQ9BU64 300 aa7.28□□□□□ -1.24
TRAV33-201ENST00000557514 MDFICQ9P1T7 246 aa7.28□□□□□ -1.24
TRAV33-201ENST00000557514 XCL2Q9UBD3 114 aa7.28□□□□□ -1.24
TRAV33-201ENST00000557514 FAT3Q8TDW7 4589 aa7.27□□□□□ -1.25
TRAV33-201ENST00000557514 SLC17A2O00624 439 aa7.27□□□□□ -1.25
TRAV33-201ENST00000557514 RBFOX2O43251 390 aaKnown RBP eCLIP7.27□□□□□ -1.25
TRAV33-201ENST00000557514 ACSM3Q53FZ2 586 aa7.27□□□□□ -1.25
TRAV33-201ENST00000557514 SERTAD4-AS1Q5TG53 156 aa7.27□□□□□ -1.25
TRAV33-201ENST00000557514 TOMM20LQ6UXN7 152 aa7.27□□□□□ -1.25
TRAV33-201ENST00000557514 Q6ZSN1 163 aa7.27□□□□□ -1.25
TRAV33-201ENST00000557514 CBR4Q8N4T8 237 aa7.27□□□□□ -1.25
TRAV33-201ENST00000557514 STXBP6Q8NFX7 210 aa7.27□□□□□ -1.25
TRAV33-201ENST00000557514 LSM10Q969L4 123 aaKnown RBP7.27□□□□□ -1.25
TRAV33-201ENST00000557514 RAB3CQ96E17 227 aa7.27□□□□□ -1.25
TRAV33-201ENST00000557514 GFI1Q99684 422 aa7.27□□□□□ -1.25
TRAV33-201ENST00000557514 AIFM2Q9BRQ8 373 aa7.27□□□□□ -1.25
TRAV33-201ENST00000557514 ZFAND3Q9H8U3 227 aa7.27□□□□□ -1.25
TRAV33-201ENST00000557514 RFNGQ9Y644 331 aa7.27□□□□□ -1.25
TRAV33-201ENST00000557514 LOC100130705A0A1B0GUX0 176 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 SMIM9A6NGZ8 99 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 TRAPPC2P0DI81 140 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 TRAPPC2BP0DI82 140 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 GNB3P16520 340 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 NFYAP23511 347 aaPredicted RBP7.26□□□□□ -1.25
TRAV33-201ENST00000557514 TAS2R31P59538 309 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 NUTF2P61970 127 aaKnown RBP7.26□□□□□ -1.25
TRAV33-201ENST00000557514 HSD17B12Q53GQ0 312 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 TTC32Q5I0X7 151 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 CCDC197Q8NCU1 140 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 TMEM80Q96HE8 168 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 C17orf77Q96MU5 243 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 GPHA2Q96T91 129 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 DCSTAMPQ9H295 470 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 TMEM231Q9H6L2 316 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 PLGRKTQ9HBL7 147 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 TMEM140Q9NV12 185 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 PTTG2Q9NZH5 202 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 LINC00588Q9Y4M8 146 aa7.26□□□□□ -1.25
TRAV33-201ENST00000557514 EFCAB10A6NFE3 127 aa7.25□□□□□ -1.25
TRAV33-201ENST00000557514 KRTAP29-1A8MX34 341 aaPredicted RBP7.25□□□□□ -1.25
TRAV33-201ENST00000557514 I3L2K1 104 aa7.25□□□□□ -1.25
TRAV33-201ENST00000557514 NQO2P16083 231 aa7.25□□□□□ -1.25
TRAV33-201ENST00000557514 HIST1H1DP16402 221 aaKnown RBP7.25□□□□□ -1.25
TRAV33-201ENST00000557514 ALDH3B2P48448 385 aa7.25□□□□□ -1.25
TRAV33-201ENST00000557514 RAB11BQ15907 218 aa7.25□□□□□ -1.25
TRAV33-201ENST00000557514 C1orf146Q5VVC0 180 aa7.25□□□□□ -1.25
TRAV33-201ENST00000557514 CDPF1Q6NVV7 123 aa7.25□□□□□ -1.25
TRAV33-201ENST00000557514 SPAG16Q8N0X2 631 aa7.25□□□□□ -1.25
TRAV33-201ENST00000557514 SYT8Q8NBV8 401 aa7.25□□□□□ -1.25
TRAV33-201ENST00000557514 OR1L8Q8NGR8 309 aa7.25□□□□□ -1.25
TRAV33-201ENST00000557514 OR1P1Q8NH06 330 aa7.25□□□□□ -1.25
TRAV33-201ENST00000557514 ZNF503Q96F45 646 aa7.25□□□□□ -1.25
TRAV33-201ENST00000557514 RAB40CQ96S21 281 aa7.25□□□□□ -1.25
TRAV33-201ENST00000557514 TXN2Q99757 166 aa7.25□□□□□ -1.25
TRAV33-201ENST00000557514 Q9H3A6 140 aa7.25□□□□□ -1.25
TRAV33-201ENST00000557514 NDUFA4L2Q9NRX3 87 aa7.25□□□□□ -1.25
TRAV33-201ENST00000557514 PUS1Q9Y606 427 aaKnown RBP eCLIP7.25□□□□□ -1.25
TRAV33-201ENST00000557514 DNAH8Q96JB1 4490 aa7.24□□□□□ -1.25
TRAV33-201ENST00000557514 LRP2P98164 4655 aa7.24□□□□□ -1.25
TRAV33-201ENST00000557514 TEX50A0A1B0GTY4 177 aa7.24□□□□□ -1.25
TRAV33-201ENST00000557514 DENRO43583 198 aaKnown RBP7.24□□□□□ -1.25
TRAV33-201ENST00000557514 UCHL1P09936 223 aa7.24□□□□□ -1.25
TRAV33-201ENST00000557514 DTYMKP23919 212 aa7.24□□□□□ -1.25
TRAV33-201ENST00000557514 GNRHRP30968 328 aa7.24□□□□□ -1.25
TRAV33-201ENST00000557514 MFAP4P55083 255 aa7.24□□□□□ -1.25
TRAV33-201ENST00000557514 CCL18P55774 89 aa7.24□□□□□ -1.25
TRAV33-201ENST00000557514 CLDN12P56749 244 aa7.24□□□□□ -1.25
TRAV33-201ENST00000557514 RCN1Q15293 331 aa7.24□□□□□ -1.25
TRAV33-201ENST00000557514 PSMG4Q5JS54 123 aa7.24□□□□□ -1.25
TRAV33-201ENST00000557514 OGFRL1Q5TC84 451 aaPredicted RBP7.24□□□□□ -1.25
TRAV33-201ENST00000557514 MS4A15Q8N5U1 240 aa7.24□□□□□ -1.25
TRAV33-201ENST00000557514 SLC25A46Q96AG3 418 aa7.24□□□□□ -1.25
TRAV33-201ENST00000557514 FAM3DQ96BQ1 224 aa7.24□□□□□ -1.25
TRAV33-201ENST00000557514 PGPEP1Q9NXJ5 209 aa7.24□□□□□ -1.25
TRAV33-201ENST00000557514 YTHDF2Q9Y5A9 579 aaKnown RBP7.24□□□□□ -1.25
TRAV33-201ENST00000557514 TMEM272A0A1B0GTI8 110 aa7.23□□□□□ -1.25
TRAV33-201ENST00000557514 H3BMM0 161 aa7.23□□□□□ -1.25
TRAV33-201ENST00000557514 TNFSF12O43508 249 aa7.23□□□□□ -1.25
TRAV33-201ENST00000557514 SMR3BP02814 79 aaPredicted RBP7.23□□□□□ -1.25
TRAV33-201ENST00000557514 CTXN2P0C2S0 81 aa7.23□□□□□ -1.25
TRAV33-201ENST00000557514 P2RY1P47900 373 aa7.23□□□□□ -1.25
TRAV33-201ENST00000557514 WNT4P56705 351 aa7.23□□□□□ -1.25
TRAV33-201ENST00000557514 MSMO1Q15800 293 aa7.23□□□□□ -1.25
TRAV33-201ENST00000557514 KCTD21Q4G0X4 260 aa7.23□□□□□ -1.25
TRAV33-201ENST00000557514 OR10R2Q8NGX6 335 aa7.23□□□□□ -1.25
TRAV33-201ENST00000557514 A0A1B0GU03 582 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms