RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 UBE2CO00762 179 aa11.81□□□□□ -0.52
TUBB3-213ENST00000557262 SPRY2O43597 315 aa11.81□□□□□ -0.52
TUBB3-213ENST00000557262 HLA-DMAP28067 261 aa11.81□□□□□ -0.52
TUBB3-213ENST00000557262 S100GP29377 79 aa11.81□□□□□ -0.52
TUBB3-213ENST00000557262 ADMP35318 185 aa11.81□□□□□ -0.52
TUBB3-213ENST00000557262 HRH1P35367 487 aa11.81□□□□□ -0.52
TUBB3-213ENST00000557262 Q56UQ5 140 aa11.81□□□□□ -0.52
TUBB3-213ENST00000557262 Q6ZWC4 215 aa11.81□□□□□ -0.52
TUBB3-213ENST00000557262 UBAC2Q8NBM4 344 aa11.81□□□□□ -0.52
TUBB3-213ENST00000557262 FXYD6Q9H0Q3 95 aa11.81□□□□□ -0.52
TUBB3-213ENST00000557262 FAM212BQ9NTI7 297 aaPredicted RBP11.81□□□□□ -0.52
TUBB3-213ENST00000557262 UBQLN2Q9UHD9 624 aa11.81□□□□□ -0.52
TUBB3-213ENST00000557262 ALMS1Q8TCU4 4167 aa11.81□□□□□ -0.52
TUBB3-213ENST00000557262 SMIM31A0A1B0GVY4 71 aa11.8□□□□□ -0.52
TUBB3-213ENST00000557262 CTSGP08311 255 aa11.8□□□□□ -0.52
TUBB3-213ENST00000557262 TSPAN5P62079 268 aa11.8□□□□□ -0.52
TUBB3-213ENST00000557262 PHLDA2Q53GA4 152 aa11.8□□□□□ -0.52
TUBB3-213ENST00000557262 OR1P1Q8NH06 330 aa11.8□□□□□ -0.52
TUBB3-213ENST00000557262 GPX8Q8TED1 209 aa11.8□□□□□ -0.52
TUBB3-213ENST00000557262 VCX3AQ9NNX9 186 aa11.8□□□□□ -0.52
TUBB3-213ENST00000557262 TMEM14BQ9NUH8 114 aa11.8□□□□□ -0.52
TUBB3-213ENST00000557262 IGHV3OR16-8A0A075B7F1 116 aa11.79□□□□□ -0.52
TUBB3-213ENST00000557262 A0A087WXM4 84 aa11.79□□□□□ -0.52
TUBB3-213ENST00000557262 KIR2DL5BA0A0G2JN68 375 aa11.79□□□□□ -0.52
TUBB3-213ENST00000557262 KIR2DL5BA0A0G2JPC4 375 aa11.79□□□□□ -0.52
TUBB3-213ENST00000557262 OR4C46A6NHA9 309 aa11.79□□□□□ -0.52
TUBB3-213ENST00000557262 DBX1A6NMT0 343 aa11.79□□□□□ -0.52
TUBB3-213ENST00000557262 C15orf61A6NNL5 157 aa11.79□□□□□ -0.52
TUBB3-213ENST00000557262 C15orf62A8K5M9 175 aa11.79□□□□□ -0.52
TUBB3-213ENST00000557262 ZNF207O43670 478 aaKnown RBP11.79□□□□□ -0.52
TUBB3-213ENST00000557262 EIF4EP06730 217 aaKnown RBP11.79□□□□□ -0.52
TUBB3-213ENST00000557262 BMI1P35226 326 aa11.79□□□□□ -0.52
TUBB3-213ENST00000557262 KIR2DL5AQ8N109 375 aa11.79□□□□□ -0.52
TUBB3-213ENST00000557262 KIR2DL5BQ8NHK3 375 aa11.79□□□□□ -0.52
TUBB3-213ENST00000557262 SLC25A46Q96AG3 418 aa11.79□□□□□ -0.52
TUBB3-213ENST00000557262 CMTM3Q96MX0 182 aa11.79□□□□□ -0.52
TUBB3-213ENST00000557262 COMMD3Q9UBI1 195 aa11.79□□□□□ -0.52
TUBB3-213ENST00000557262 SMPXQ9UHP9 88 aa11.79□□□□□ -0.52
TUBB3-213ENST00000557262 CTSDP07339 412 aaPredicted RBP11.78□□□□□ -0.52
TUBB3-213ENST00000557262 MFAP4P55083 255 aa11.78□□□□□ -0.52
TUBB3-213ENST00000557262 UCP3P55916 312 aa11.78□□□□□ -0.52
TUBB3-213ENST00000557262 RELQ04864 619 aaPredicted RBP11.78□□□□□ -0.52
TUBB3-213ENST00000557262 TNFRSF9Q07011 255 aa11.78□□□□□ -0.52
TUBB3-213ENST00000557262 ODF3L2Q3SX64 289 aa11.78□□□□□ -0.52
TUBB3-213ENST00000557262 H2BFWTQ7Z2G1 175 aa11.78□□□□□ -0.52
TUBB3-213ENST00000557262 TBC1D26Q86UD7 250 aa11.78□□□□□ -0.52
TUBB3-213ENST00000557262 STPG3Q8N7X2 389 aa11.78□□□□□ -0.52
TUBB3-213ENST00000557262 OR4A16Q8NH70 328 aa11.78□□□□□ -0.52
TUBB3-213ENST00000557262 SEC22AQ96IW7 307 aa11.78□□□□□ -0.52
TUBB3-213ENST00000557262 TXN2Q99757 166 aa11.78□□□□□ -0.52
TUBB3-213ENST00000557262 SCPEP1Q9HB40 452 aa11.78□□□□□ -0.52
TUBB3-213ENST00000557262 A0A0J9YWU9 116 aa11.77□□□□□ -0.53
TUBB3-213ENST00000557262 NUPL2O15504 423 aaKnown RBP11.77□□□□□ -0.53
TUBB3-213ENST00000557262 APOA1P02647 267 aa11.77□□□□□ -0.53
TUBB3-213ENST00000557262 FCGR2BP31994 310 aaPredicted RBP11.77□□□□□ -0.53
TUBB3-213ENST00000557262 CMC4P56277 68 aaPredicted RBP11.77□□□□□ -0.53
TUBB3-213ENST00000557262 DEFB135Q30KP9 77 aa11.77□□□□□ -0.53
TUBB3-213ENST00000557262 LYG2Q86SG7 212 aa11.77□□□□□ -0.53
TUBB3-213ENST00000557262 RNF183Q96D59 192 aa11.77□□□□□ -0.53
TUBB3-213ENST00000557262 MISP3Q96FF7 219 aa11.77□□□□□ -0.53
TUBB3-213ENST00000557262 GALNT14Q96FL9 552 aa11.77□□□□□ -0.53
TUBB3-213ENST00000557262 IGHV7-4-1A0A0J9YVY3 117 aa11.76□□□□□ -0.53
TUBB3-213ENST00000557262 CXorf65A6NEN9 183 aa11.76□□□□□ -0.53
TUBB3-213ENST00000557262 I3L2K1 104 aa11.76□□□□□ -0.53
TUBB3-213ENST00000557262 CHEK1O14757 476 aa11.76□□□□□ -0.53
TUBB3-213ENST00000557262 IGKV1-39P01597 117 aa11.76□□□□□ -0.53
TUBB3-213ENST00000557262 IGKV1D-39P04432 117 aa11.76□□□□□ -0.53
TUBB3-213ENST00000557262 RCVRNP35243 200 aa11.76□□□□□ -0.53
TUBB3-213ENST00000557262 HSPE1P61604 102 aaKnown RBP11.76□□□□□ -0.53
TUBB3-213ENST00000557262 SNX29P2Q8IUI4 249 aa11.76□□□□□ -0.53
TUBB3-213ENST00000557262 TMEM116Q8NCL8 245 aa11.76□□□□□ -0.53
TUBB3-213ENST00000557262 ZNF414Q96IQ9 312 aa11.76□□□□□ -0.53
TUBB3-213ENST00000557262 RNF2Q99496 336 aa11.76□□□□□ -0.53
TUBB3-213ENST00000557262 RHPN1-AS1Q9BWJ2 59 aa11.76□□□□□ -0.53
TUBB3-213ENST00000557262 MAP6D1Q9H9H5 199 aa11.76□□□□□ -0.53
TUBB3-213ENST00000557262 NUPR2A6NF83 97 aa11.75□□□□□ -0.53
TUBB3-213ENST00000557262 YIF1AO95070 293 aa11.75□□□□□ -0.53
TUBB3-213ENST00000557262 TNFAIP8O95379 198 aa11.75□□□□□ -0.53
TUBB3-213ENST00000557262 MT-CO2P00403 227 aa11.75□□□□□ -0.53
TUBB3-213ENST00000557262 RPL35AP18077 110 aaKnown RBP11.75□□□□□ -0.53
TUBB3-213ENST00000557262 ATF4P18848 351 aaPredicted RBP11.75□□□□□ -0.53
TUBB3-213ENST00000557262 ERHP84090 104 aaKnown RBP11.75□□□□□ -0.53
TUBB3-213ENST00000557262 PRCDQ00LT1 54 aa11.75□□□□□ -0.53
TUBB3-213ENST00000557262 EWSR1Q01844 656 aaKnown RBP eCLIP11.75□□□□□ -0.53
TUBB3-213ENST00000557262 PMS2P11Q13670 270 aa11.75□□□□□ -0.53
TUBB3-213ENST00000557262 ZNF114Q8NC26 417 aa11.75□□□□□ -0.53
TUBB3-213ENST00000557262 OR10C1Q96KK4 312 aa11.75□□□□□ -0.53
TUBB3-213ENST00000557262 C6orf62Q9GZU0 229 aaPredicted RBP11.75□□□□□ -0.53
TUBB3-213ENST00000557262 NXF2Q9GZY0 626 aaKnown RBP11.75□□□□□ -0.53
TUBB3-213ENST00000557262 TRAV14DV4A0A0A6YYC5 116 aa11.74□□□□□ -0.53
TUBB3-213ENST00000557262 ELK1P19419 428 aa11.74□□□□□ -0.53
TUBB3-213ENST00000557262 NCS1P62166 190 aa11.74□□□□□ -0.53
TUBB3-213ENST00000557262 CEMP1Q6PRD7 247 aaPredicted RBP11.74□□□□□ -0.53
TUBB3-213ENST00000557262 LINC00476Q8WZB0 136 aa11.74□□□□□ -0.53
TUBB3-213ENST00000557262 MRGPRFQ96AM1 343 aa11.74□□□□□ -0.53
TUBB3-213ENST00000557262 FUNDC2Q9BWH2 189 aa11.74□□□□□ -0.53
TUBB3-213ENST00000557262 IGHV3-49A0A0A0MS15 119 aa11.73□□□□□ -0.53
TUBB3-213ENST00000557262 GNG7O60262 68 aa11.73□□□□□ -0.53
TUBB3-213ENST00000557262 LY6G6CO95867 125 aa11.73□□□□□ -0.53
TUBB3-213ENST00000557262 VBP1P61758 197 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms