RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 H3BTX0 84 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 M0R1W7 72 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 PHF1O43189 567 aaPredicted RBP4.79□□□□□ -1.64
FOXN3-215ENST00000557261 OR2F2O95006 317 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 IGF1P05019 195 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 RNF224P0DH78 156 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 DLX6P56179 175 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 GAGE5Q13069 117 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 GAGE6Q13070 117 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 RIGQ13278 110 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 OR2F1Q13607 317 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 SLC9A3R2Q15599 337 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 NMSQ5H8A3 153 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 SLC25A48Q6ZT89 311 aaKnown RBP4.79□□□□□ -1.64
FOXN3-215ENST00000557261 ZNF575Q86XF7 245 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 PRIMA1Q86XR5 153 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 TGIF2LYQ8IUE0 185 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 DRAM1Q8N682 238 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 TPRX1Q8N7U7 411 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 LY6G5BQ8NDX9 201 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 PPP1R1CQ8WVI7 109 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 TP53RKQ96S44 253 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 PDCD10Q9BUL8 212 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 OR2D2Q9H210 308 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 PLEKHA3Q9HB20 300 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 PATZ1Q9HBE1 687 aaKnown RBP4.79□□□□□ -1.64
FOXN3-215ENST00000557261 CCL28Q9NRJ3 127 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 COMMD9Q9P000 198 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 MBD2Q9UBB5 411 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 MTORP42345 2549 aa4.79□□□□□ -1.64
FOXN3-215ENST00000557261 AKAP9Q99996 3911 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 CSMD2Q7Z408 3487 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 TRAV14DV4A0A0A6YYC5 116 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 PPIAL4CA0A0B4J2A2 164 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 A0A0D9SG52 128 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 A0A1B0GU03 582 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 A0A1B0GW55 424 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 MSGN1A6NI15 193 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 CCSO14618 274 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 HSD17B6O14756 317 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 RAB29O14966 203 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 NBR2O15453 112 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 FCN3O75636 299 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 MPC2O95563 127 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 SERPINE2P07093 398 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 OR8U9P0C7N5 309 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 P0C879 139 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 DUX4L2P0CJ85 424 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 DUX4L3P0CJ86 424 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 DUX4L4P0CJ87 422 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 DUX4L5P0CJ88 424 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 DUX4L6P0CJ89 424 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 DUX4L7P0CJ90 424 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 PPIAL4GP0DN37 164 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 COL8A2P25067 703 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 PSMB6P28072 239 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 PPP1CCP36873 323 aaKnown RBP4.78□□□□□ -1.64
FOXN3-215ENST00000557261 HOXA1P49639 335 aaPredicted RBP4.78□□□□□ -1.64
FOXN3-215ENST00000557261 THBS3P49746 956 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 DSCR9P59020 149 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 GNMTQ14749 295 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 POU2AF1Q16633 256 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 PRAMEF5Q5TYX0 476 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 WDR25Q64LD2 544 aaPredicted RBP4.78□□□□□ -1.64
FOXN3-215ENST00000557261 LAMTOR1Q6IAA8 161 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 C11orf87Q6NUJ2 197 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 PRSS54Q6PEW0 395 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 DUX4L9Q6RFH8 374 aaPredicted RBP4.78□□□□□ -1.64
FOXN3-215ENST00000557261 ZNF833PQ6ZTB9 187 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 ZNF695Q8IW36 515 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 FAM71E2Q8N5Q1 922 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 SLC35G3Q8N808 338 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 DEFB108BQ8NET1 73 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 OR8U1Q8NH10 309 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 LHFPL5Q8TAF8 219 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 PRAC1Q96KF2 57 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 AQP10Q96PS8 301 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 METTL8Q9H825 291 aaKnown RBP4.78□□□□□ -1.64
FOXN3-215ENST00000557261 C19orf12Q9NSK7 152 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 SDHAF2Q9NX18 166 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 DUX4Q9UBX2 424 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 TNFSF18Q9UNG2 199 aa4.78□□□□□ -1.64
FOXN3-215ENST00000557261 RBM7Q9Y580 266 aaKnown RBP4.78□□□□□ -1.64
FOXN3-215ENST00000557261 TRAV39A0A0B4J263 110 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 PPIHO43447 177 aaKnown RBP4.77□□□□□ -1.65
FOXN3-215ENST00000557261 PITX3O75364 302 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 DEDDO75618 318 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 ADAP1O75689 374 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 HPRT1P00492 218 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 IGHV2-5P01817 119 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 TFF1P04155 84 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 IGHV1-8P0DP01 117 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 COX6B1P14854 86 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 IL3RAP26951 378 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 GPR6P46095 362 aaPredicted RBP4.77□□□□□ -1.65
FOXN3-215ENST00000557261 IAH1Q2TAA2 248 aaPredicted RBP4.77□□□□□ -1.65
FOXN3-215ENST00000557261 THOC7Q6I9Y2 204 aaKnown RBP4.77□□□□□ -1.65
FOXN3-215ENST00000557261 LYPD2Q6UXB3 125 aa4.77□□□□□ -1.65
FOXN3-215ENST00000557261 RBMS3Q6XE24 437 aaKnown RBP4.77□□□□□ -1.65
FOXN3-215ENST00000557261 ADAMTSL5Q6ZMM2 481 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms