RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 TPPP2P59282 170 aa8.17□□□□□ -1.1
HNRNPC-230ENST00000557201 KLF5Q13887 457 aaPredicted RBP8.17□□□□□ -1.1
HNRNPC-230ENST00000557201 TMEM187Q14656 261 aa8.17□□□□□ -1.1
HNRNPC-230ENST00000557201 FXYD3Q14802 87 aa8.17□□□□□ -1.1
HNRNPC-230ENST00000557201 TRIM16LQ309B1 348 aa8.17□□□□□ -1.1
HNRNPC-230ENST00000557201 SSX9Q7RTT3 188 aa8.17□□□□□ -1.1
HNRNPC-230ENST00000557201 NRARPQ7Z6K4 114 aa8.17□□□□□ -1.1
HNRNPC-230ENST00000557201 RBPMSQ93062 196 aaKnown RBP8.17□□□□□ -1.1
HNRNPC-230ENST00000557201 ELOVL1Q9BW60 279 aa8.17□□□□□ -1.1
HNRNPC-230ENST00000557201 C20orf85Q9H1P6 137 aa8.17□□□□□ -1.1
HNRNPC-230ENST00000557201 TMEM140Q9NV12 185 aa8.17□□□□□ -1.1
HNRNPC-230ENST00000557201 NUDT15Q9NV35 164 aa8.17□□□□□ -1.1
HNRNPC-230ENST00000557201 C9orf170A2RU37 121 aa8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 H3BUA1 57 aa8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 UPK2O00526 184 aa8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 ACTL6BO94805 426 aa8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 BRI3O95415 125 aa8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 SFT2D2O95562 160 aa8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 TRGV3P03979 118 aa8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 OR4E1P0C645 316 aa8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 ANXA7P20073 488 aaKnown RBP8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 VAMP1P23763 118 aa8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 RPL8P62917 257 aaKnown RBP8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 PPP1R1AQ13522 171 aa8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 FAM219AQ8IW50 185 aa8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 SELENOHQ8IZQ5 122 aaKnown RBP8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 LRTM2Q8N967 370 aa8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 LHFPL5Q8TAF8 219 aa8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 ENKURQ8TC29 256 aa8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 ABHD5Q8WTS1 349 aa8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 CLCC1Q96S66 551 aa8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 RANGRFQ9HD47 186 aaPredicted RBP8.16□□□□□ -1.1
HNRNPC-230ENST00000557201 A0A0B4J2A0 478 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 CNIH1O95406 144 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 IGKV1-5P01602 117 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 H2AFB2P0C5Z0 115 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 HLA-GP17693 338 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 ZP3P21754 424 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 DHRS2Q13268 280 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 HAGHQ16775 308 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 TMEM268Q5VZI3 342 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 ADAMTSL5Q6ZMM2 481 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 H2BFWTQ7Z2G1 175 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 LGI3Q8N145 548 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 LSM10Q969L4 123 aaKnown RBP8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 RRNAD1Q96FB5 475 aaKnown RBP8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 TMEM68Q96MH6 324 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 SPIN2AQ99865 258 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 SPIN2BQ9BPZ2 258 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 SPATA25Q9BR10 227 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 MARVELD1Q9BSK0 173 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 TMEM14BQ9NUH8 114 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 FKBP11Q9NYL4 201 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 SHPKQ9UHJ6 478 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 PRNDQ9UKY0 176 aa8.15□□□□□ -1.1
HNRNPC-230ENST00000557201 TRAV6A0A075B6T7 132 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 TRAV3A0A0B4J244 114 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 A0A0B4J293 547 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 DUXBA0A1W2PPF3 345 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 SNAPC5O75971 98 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 PTTG1O95997 202 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 HLA-AP01891 365 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 AKR1C2P52895 323 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 TNXAQ16473 311 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 ANKRD55Q3KP44 614 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 AARDQ4LEZ3 155 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 C4orf46Q504U0 113 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 PLET1Q6UQ28 207 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 LYG2Q86SG7 212 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 OR9G4Q8NGQ1 327 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 OR5B3Q8NH48 314 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 SRSF12Q8WXF0 261 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 SRSF8Q9BRL6 282 aaKnown RBP8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 COMMD5Q9GZQ3 224 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 SIGLEC8Q9NYZ4 499 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 ZNF257Q9Y2Q1 563 aa8.14□□□□□ -1.11
HNRNPC-230ENST00000557201 MSGN1A6NI15 193 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 C15orf61A6NNL5 157 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 RBMXL2O75526 392 aaKnown RBP8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 IL5P05113 134 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 CSN3P07498 182 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 OR9G9P0C7N8 305 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 OR2B8PP59922 312 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 NMSQ5H8A3 153 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 ZNF343Q6P1L6 599 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 LINC00322Q6ZN03 302 aaPredicted RBP8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 LYZL2Q7Z4W2 148 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 SLC35G3Q8N808 338 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 OR5T1Q8NG75 326 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 OR4A16Q8NH70 328 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 GRPEL2Q8TAA5 225 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 MITD1Q8WV92 249 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 COA4Q9NYJ1 87 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 PRR13Q9NZ81 148 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 CACFD1Q9UGQ2 172 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 TMED3Q9Y3Q3 217 aa8.13□□□□□ -1.11
HNRNPC-230ENST00000557201 A0A0G2JLM5 398 aa8.12□□□□□ -1.11
HNRNPC-230ENST00000557201 A0A0G2JRQ6 117 aa8.12□□□□□ -1.11
HNRNPC-230ENST00000557201 TEX50A0A1B0GTY4 177 aa8.12□□□□□ -1.11
HNRNPC-230ENST00000557201 C13orf42A0A1B0GVH6 325 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms