RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 VSTM2AQ8TAG5 236 aa3.94□□□□□ -1.78
ATXN3-245ENST00000556958 CYGBQ8WWM9 190 aa3.94□□□□□ -1.78
ATXN3-245ENST00000556958 NEDD4LQ96PU5 975 aa3.94□□□□□ -1.78
ATXN3-245ENST00000556958 SLC29A1Q99808 456 aa3.94□□□□□ -1.78
ATXN3-245ENST00000556958 TM2D1Q9BX74 207 aa3.94□□□□□ -1.78
ATXN3-245ENST00000556958 OR51E2Q9H255 320 aa3.94□□□□□ -1.78
ATXN3-245ENST00000556958 CHMP1AQ9HD42 196 aaPredicted RBP3.94□□□□□ -1.78
ATXN3-245ENST00000556958 MGAT4AQ9UM21 535 aa3.94□□□□□ -1.78
ATXN3-245ENST00000556958 YTHDF2Q9Y5A9 579 aaKnown RBP3.94□□□□□ -1.78
ATXN3-245ENST00000556958 IGHV3-49A0A0A0MS15 119 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 TRAV3A0A0B4J244 114 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 OR4C45A6NMZ5 311 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 ZAR1LA6NP61 321 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 NUPL2O15504 423 aaKnown RBP3.93□□□□□ -1.78
ATXN3-245ENST00000556958 ATP5G1P05496 136 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 DNAH10OSP0CZ25 163 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 SAA1P0DJI8 122 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-245ENST00000556958 ATP5G3P48201 142 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 NANOS3P60323 173 aaKnown RBP3.93□□□□□ -1.78
ATXN3-245ENST00000556958 OGFRL1Q5TC84 451 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-245ENST00000556958 DDI2Q5TDH0 399 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 SPARTQ8N0X7 666 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 RFKQ969G6 155 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 MRPL48Q96GC5 212 aaKnown RBP3.93□□□□□ -1.78
ATXN3-245ENST00000556958 ZNF414Q96IQ9 312 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 OR10C1Q96KK4 312 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 RAB40CQ96S21 281 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 GINS3Q9BRX5 216 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 DCUN1D5Q9BTE7 237 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 SELENOIQ9C0D9 397 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 GABARAPL1Q9H0R8 117 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 RIMS4Q9H426 269 aaPredicted RBP3.93□□□□□ -1.78
ATXN3-245ENST00000556958 TMEM231Q9H6L2 316 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 AMBNQ9NP70 447 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 MRPS16Q9Y3D3 137 aaKnown RBP3.93□□□□□ -1.78
ATXN3-245ENST00000556958 FAT3Q8TDW7 4589 aa3.93□□□□□ -1.78
ATXN3-245ENST00000556958 IGHV3OR16-13A0A075B7E8 117 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 TRAV9-2A0A087WT02 112 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 IGHV3-74A0A0B4J1X5 117 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 LOC100130705A0A1B0GUX0 176 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 A0A1W2PP11 408 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 DAPL1A0PJW8 107 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 TMEM212A6NML5 194 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 SNTNA6NMZ2 147 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 LYRM9A8MSI8 78 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 J3QLW9 94 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 ALPLP05186 524 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 ZNF688P0C7X2 276 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 ZNF19P17023 458 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 CALRP27797 417 aaKnown RBP3.92□□□□□ -1.78
ATXN3-245ENST00000556958 BDKRB2P30411 391 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 TMED1Q13445 227 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 ARFRP1Q13795 201 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 SSX1Q16384 188 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 SMN1Q16637 294 aaKnown RBP3.92□□□□□ -1.78
ATXN3-245ENST00000556958 RRN3P1Q2M238 152 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 Q56UQ5 140 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 C12orf73Q69YU5 71 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 LHFPL3Q86UP9 236 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 DHRSXQ8N5I4 330 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 FAM24BQ8N5W8 94 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 OR8J1Q8NGP2 316 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 OR5AK2Q8NH90 309 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 SETD6Q8TBK2 473 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 Q96MT0 163 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 AIFM2Q9BRQ8 373 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 VSIRQ9H7M9 311 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 SDHAF2Q9NX18 166 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 C21orf62Q9NYP8 219 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 OR1A1Q9P1Q5 309 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 EXOGQ9Y2C4 368 aaKnown RBP3.92□□□□□ -1.78
ATXN3-245ENST00000556958 GOLT1BQ9Y3E0 138 aa3.92□□□□□ -1.78
ATXN3-245ENST00000556958 A0A1W2PS18 150 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 CBY3A6NI87 242 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 LINC00473A8K010 186 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 E7EUB6 86 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 K7EQG2 157 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 CRTAPO75718 401 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-245ENST00000556958 ATP6V1G2O95670 118 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 DEFB130BP0DP73 79 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 DEFB130AP0DP74 79 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 MGMTP16455 207 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 SERPINB10P48595 397 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 EIF2B2P49770 351 aaKnown RBP3.91□□□□□ -1.78
ATXN3-245ENST00000556958 EFNB1P98172 346 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 ZNF85Q03923 595 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 KCTD21Q4G0X4 260 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 LELP1Q5T871 98 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 TTC23Q5W5X9 447 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 IGFL4Q6B9Z1 124 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 SIGIRRQ6IA17 410 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 SLC25A24Q6NUK1 477 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 ZNF880Q6PDB4 577 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 GLIPR1L1Q6UWM5 242 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 UBAC2Q8NBM4 344 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 STXBP6Q8NFX7 210 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 OR6M1Q8NGM8 313 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 TMEM167AQ8TBQ9 72 aa3.91□□□□□ -1.78
ATXN3-245ENST00000556958 TRUB1Q8WWH5 349 aaKnown RBP3.91□□□□□ -1.78
ATXN3-245ENST00000556958 GNPNAT1Q96EK6 184 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms