RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 TSC22D2O75157 780 aa12.91□□□□□ -0.34
PCNX4-213ENST00000556907 CA2P00918 260 aa12.91□□□□□ -0.34
PCNX4-213ENST00000556907 MYOD1P15172 320 aa12.91□□□□□ -0.34
PCNX4-213ENST00000556907 RPL27AP46776 148 aaKnown RBP12.91□□□□□ -0.34
PCNX4-213ENST00000556907 HOXA1P49639 335 aaPredicted RBP12.91□□□□□ -0.34
PCNX4-213ENST00000556907 VAMP2P63027 116 aa12.91□□□□□ -0.34
PCNX4-213ENST00000556907 PJVKQ0ZLH3 352 aa12.91□□□□□ -0.34
PCNX4-213ENST00000556907 TNXAQ16473 311 aa12.91□□□□□ -0.34
PCNX4-213ENST00000556907 ZNF546Q86UE3 836 aa12.91□□□□□ -0.34
PCNX4-213ENST00000556907 C9orf62Q8N4C0 152 aa12.91□□□□□ -0.34
PCNX4-213ENST00000556907 SGMS2Q8NHU3 365 aa12.91□□□□□ -0.34
PCNX4-213ENST00000556907 SMIM8Q96KF7 97 aa12.91□□□□□ -0.34
PCNX4-213ENST00000556907 AQP10Q96PS8 301 aa12.91□□□□□ -0.34
PCNX4-213ENST00000556907 CITED1Q99966 193 aa12.91□□□□□ -0.34
PCNX4-213ENST00000556907 PLEKHA3Q9HB20 300 aa12.91□□□□□ -0.34
PCNX4-213ENST00000556907 NDUFA4L2Q9NRX3 87 aa12.91□□□□□ -0.34
PCNX4-213ENST00000556907 LYRM2Q9NU23 88 aaPredicted RBP12.91□□□□□ -0.34
PCNX4-213ENST00000556907 STAB1Q9NY15 2570 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 A0A1W2PN81 502 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 CGB1A6NKQ9 187 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 LINC01548A6NM66 108 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 FCN1O00602 326 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 CNIH1O95406 144 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 TMEM50AO95807 157 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 IAPPP10997 89 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 CHRNA7P36544 502 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 NKX2-5P52952 324 aaPredicted RBP12.9□□□□□ -0.34
PCNX4-213ENST00000556907 PAX9P55771 341 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 RPL23AP62750 156 aaKnown RBP12.9□□□□□ -0.34
PCNX4-213ENST00000556907 FXYD3Q14802 87 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 TMEM95Q3KNT9 176 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 AKIRIN2Q53H80 203 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 C10orf55Q5SWW7 151 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 OR5AU1Q8NGC0 362 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 OR4X2Q8NGF9 303 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 ARPC1AQ92747 370 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 CLCC1Q96S66 551 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 PARP11Q9NR21 331 aa12.9□□□□□ -0.34
PCNX4-213ENST00000556907 A0A1B0GW64 132 aa12.89□□□□□ -0.35
PCNX4-213ENST00000556907 MSGN1A6NI15 193 aa12.89□□□□□ -0.35
PCNX4-213ENST00000556907 ATP6V0E1O15342 81 aa12.89□□□□□ -0.35
PCNX4-213ENST00000556907 FBXO24O75426 580 aa12.89□□□□□ -0.35
PCNX4-213ENST00000556907 OR2F1Q13607 317 aa12.89□□□□□ -0.35
PCNX4-213ENST00000556907 SPINK9Q5DT21 86 aa12.89□□□□□ -0.35
PCNX4-213ENST00000556907 TEX38Q6PEX7 206 aa12.89□□□□□ -0.35
PCNX4-213ENST00000556907 OR2C3Q8N628 320 aa12.89□□□□□ -0.35
PCNX4-213ENST00000556907 SRSF12Q8WXF0 261 aaKnown RBP12.89□□□□□ -0.35
PCNX4-213ENST00000556907 NOL4LQ96MY1 436 aaPredicted RBP12.89□□□□□ -0.35
PCNX4-213ENST00000556907 SRSF8Q9BRL6 282 aaKnown RBP12.89□□□□□ -0.35
PCNX4-213ENST00000556907 ENY2Q9NPA8 101 aa12.89□□□□□ -0.35
PCNX4-213ENST00000556907 TRAV41A0A0B4J266 112 aa12.88□□□□□ -0.35
PCNX4-213ENST00000556907 ELANEP08246 267 aa12.88□□□□□ -0.35
PCNX4-213ENST00000556907 CXCL2P19875 107 aa12.88□□□□□ -0.35
PCNX4-213ENST00000556907 NUP62P37198 522 aaPredicted RBP12.88□□□□□ -0.35
PCNX4-213ENST00000556907 LAMTOR1Q6IAA8 161 aa12.88□□□□□ -0.35
PCNX4-213ENST00000556907 ACOT7LQ6ZUV0 252 aa12.88□□□□□ -0.35
PCNX4-213ENST00000556907 MRPL41Q8IXM3 137 aaKnown RBP12.88□□□□□ -0.35
PCNX4-213ENST00000556907 INO80EQ8NBZ0 244 aaPredicted RBP12.88□□□□□ -0.35
PCNX4-213ENST00000556907 ABHD5Q8WTS1 349 aa12.88□□□□□ -0.35
PCNX4-213ENST00000556907 MFFQ9GZY8 342 aa12.88□□□□□ -0.35
PCNX4-213ENST00000556907 PSENENQ9NZ42 101 aa12.88□□□□□ -0.35
PCNX4-213ENST00000556907 TENM1Q9UKZ4 2725 aa12.88□□□□□ -0.35
PCNX4-213ENST00000556907 IGLC7A0M8Q6 106 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 IGSF23A1L1A6 192 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 TEX22C9J3V5 150 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 E7EUB6 86 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 H3BP45 60 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 SCAF4O95104 1147 aaKnown RBP12.87□□□□□ -0.35
PCNX4-213ENST00000556907 IGHG4P01861 327 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 OPN1MWP04001 364 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 OPN1MW2P0DN77 364 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 OPN1MW3P0DN78 364 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 RPL12P30050 165 aaKnown RBP12.87□□□□□ -0.35
PCNX4-213ENST00000556907 GNB1P62873 340 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 CFHR3Q02985 330 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 BAXQ07812 192 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 BSXQ3C1V8 233 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 LGALSLQ3ZCW2 172 aaPredicted RBP12.87□□□□□ -0.35
PCNX4-213ENST00000556907 TMEM14EPQ6UXP3 125 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 HSD17B13Q7Z5P4 300 aaPredicted RBP12.87□□□□□ -0.35
PCNX4-213ENST00000556907 KCNRGQ8N5I3 272 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 TMEM252Q8N6L7 170 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 HINT2Q9BX68 163 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 SLC25A31Q9H0C2 315 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 HIPK2Q9H2X6 1198 aa12.87□□□□□ -0.35
PCNX4-213ENST00000556907 A0A0D9SG52 128 aa12.86□□□□□ -0.35
PCNX4-213ENST00000556907 FAM24AA6NFZ4 105 aa12.86□□□□□ -0.35
PCNX4-213ENST00000556907 EGR2P11161 476 aaPredicted RBP12.86□□□□□ -0.35
PCNX4-213ENST00000556907 PPIFP30405 207 aaKnown RBP12.86□□□□□ -0.35
PCNX4-213ENST00000556907 CAV2P51636 162 aa12.86□□□□□ -0.35
PCNX4-213ENST00000556907 KRTAP10-3P60369 221 aa12.86□□□□□ -0.35
PCNX4-213ENST00000556907 NDPQ00604 133 aa12.86□□□□□ -0.35
PCNX4-213ENST00000556907 EWSR1Q01844 656 aaKnown RBP eCLIP12.86□□□□□ -0.35
PCNX4-213ENST00000556907 FOXE3Q13461 319 aa12.86□□□□□ -0.35
PCNX4-213ENST00000556907 ZNF114Q8NC26 417 aa12.86□□□□□ -0.35
PCNX4-213ENST00000556907 SLC24A4Q8NFF2 622 aa12.86□□□□□ -0.35
PCNX4-213ENST00000556907 OR4C12Q96R67 309 aa12.86□□□□□ -0.35
PCNX4-213ENST00000556907 HEYLQ9NQ87 328 aaPredicted RBP12.86□□□□□ -0.35
PCNX4-213ENST00000556907 LINC00527Q9UJ94 153 aa12.86□□□□□ -0.35
PCNX4-213ENST00000556907 STRAPQ9Y3F4 350 aaKnown RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms