RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 AHCTF1Q8WYP5 2266 aa8.99□□□□□ -0.97
ACTN1-216ENST00000556083 ZNF525Q8N782 197 aa8.99□□□□□ -0.97
ACTN1-216ENST00000556083 SDHCQ99643 169 aaPredicted RBP8.99□□□□□ -0.97
ACTN1-216ENST00000556083 ARID1AO14497 2285 aa8.99□□□□□ -0.97
ACTN1-216ENST00000556083 TRBV6-6A0A0A6YYG2 114 aa8.99□□□□□ -0.97
ACTN1-216ENST00000556083 DPRXA6NFQ7 191 aa8.99□□□□□ -0.97
ACTN1-216ENST00000556083 FNDC10F2Z333 226 aa8.99□□□□□ -0.97
ACTN1-216ENST00000556083 TGFAP01135 160 aa8.99□□□□□ -0.97
ACTN1-216ENST00000556083 SCGB3A1Q96QR1 104 aa8.99□□□□□ -0.97
ACTN1-216ENST00000556083 SLC25A20O43772 301 aa8.99□□□□□ -0.97
ACTN1-216ENST00000556083 SLC25A16P16260 332 aa8.99□□□□□ -0.97
ACTN1-216ENST00000556083 CRYBA2P53672 197 aa8.99□□□□□ -0.97
ACTN1-216ENST00000556083 WNT10AQ9GZT5 417 aa8.99□□□□□ -0.97
ACTN1-216ENST00000556083 TBL2Q9Y4P3 447 aaKnown RBP8.99□□□□□ -0.97
ACTN1-216ENST00000556083 CCDC88CQ9P219 2028 aa8.99□□□□□ -0.97
ACTN1-216ENST00000556083 IGHV3OR16-12A0A075B7B8 117 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 NDUFS8O00217 210 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 ITGB1BP1O14713 200 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 DDTP30046 118 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 IFI27P40305 119 aaPredicted RBP8.98□□□□□ -0.97
ACTN1-216ENST00000556083 C3orf36Q3SXR2 165 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 MORN2Q502X0 79 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 C9orf106Q8NAJ2 232 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 RNF125Q96EQ8 232 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 C1QTNF4Q9BXJ3 329 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 SRRM5B3KS81 715 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 ID3Q02535 119 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 MRPL20Q9BYC9 149 aaKnown RBP8.98□□□□□ -0.97
ACTN1-216ENST00000556083 TMEM242Q9NWH2 141 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 DNAJC13O75165 2243 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 SRP19P09132 144 aaKnown RBP8.98□□□□□ -0.97
ACTN1-216ENST00000556083 RPL39P5Q59GN2 51 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 HEPN1Q6WQI6 88 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 LYPD1Q8N2G4 141 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 RGP1Q92546 391 aaPredicted RBP8.98□□□□□ -0.97
ACTN1-216ENST00000556083 C18orf12Q96KH6 178 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 RPUSD1Q9UJJ7 312 aaKnown RBP8.98□□□□□ -0.97
ACTN1-216ENST00000556083 FOXA2Q9Y261 457 aaPredicted RBP8.98□□□□□ -0.97
ACTN1-216ENST00000556083 SCN3AQ9NY46 2000 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 ASCC3Q8N3C0 2202 aaKnown RBP8.98□□□□□ -0.97
ACTN1-216ENST00000556083 TUBGCP6Q96RT7 1819 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 C1QL1O75973 258 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 FAM219BQ5XKK7 198 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 ARL6IP6Q8N6S5 226 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 FAM216BQ8N7L0 139 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 VWCEQ96DN2 955 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 USMG5Q96IX5 58 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 LY96Q9Y6Y9 160 aa8.98□□□□□ -0.97
ACTN1-216ENST00000556083 ZFC3H1O60293 1989 aaKnown RBP8.97□□□□□ -0.97
ACTN1-216ENST00000556083 C17orf98A8MV24 154 aa8.97□□□□□ -0.97
ACTN1-216ENST00000556083 TTC32Q5I0X7 151 aa8.97□□□□□ -0.97
ACTN1-216ENST00000556083 C8orf46Q8TAG6 207 aa8.97□□□□□ -0.97
ACTN1-216ENST00000556083 ST20Q9HBF5 79 aa8.97□□□□□ -0.97
ACTN1-216ENST00000556083 AURKAIP1Q9NWT8 199 aaPredicted RBP8.97□□□□□ -0.97
ACTN1-216ENST00000556083 WDR83OSQ9Y284 106 aa8.97□□□□□ -0.97
ACTN1-216ENST00000556083 TRAV14DV4A0A0A6YYC5 116 aa8.97□□□□□ -0.97
ACTN1-216ENST00000556083 RRHO14718 337 aa8.97□□□□□ -0.97
ACTN1-216ENST00000556083 GPR183P32249 361 aa8.97□□□□□ -0.97
ACTN1-216ENST00000556083 EFNB1P98172 346 aa8.97□□□□□ -0.97
ACTN1-216ENST00000556083 FAM74A4Q5TZK3 123 aa8.97□□□□□ -0.97
ACTN1-216ENST00000556083 STHQ8IWL8 128 aa8.97□□□□□ -0.97
ACTN1-216ENST00000556083 MBD3L1Q8WWY6 194 aa8.97□□□□□ -0.97
ACTN1-216ENST00000556083 Q9H3A6 140 aa8.97□□□□□ -0.97
ACTN1-216ENST00000556083 ANKRD31Q8N7Z5 1873 aa8.97□□□□□ -0.97
ACTN1-216ENST00000556083 COL4A5P29400 1685 aa8.97□□□□□ -0.97
ACTN1-216ENST00000556083 B4DSR2 109 aa8.97□□□□□ -0.97
ACTN1-216ENST00000556083 SAA1P0DJI8 122 aaPredicted RBP8.97□□□□□ -0.97
ACTN1-216ENST00000556083 SRSF1Q07955 248 aaKnown RBP eCLIP8.97□□□□□ -0.97
ACTN1-216ENST00000556083 RTBDNQ9BSG5 229 aaPredicted RBP8.97□□□□□ -0.97
ACTN1-216ENST00000556083 NCOR1P1Q9H4R4 102 aa8.97□□□□□ -0.97
ACTN1-216ENST00000556083 ZNF236Q9UL36 1845 aa8.96□□□□□ -0.97
ACTN1-216ENST00000556083 TRAV1-1A0A0B4J248 108 aa8.96□□□□□ -0.97
ACTN1-216ENST00000556083 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.96□□□□□ -0.97
ACTN1-216ENST00000556083 TMEM262E9PQX1 116 aa8.96□□□□□ -0.97
ACTN1-216ENST00000556083 HAX1O00165 279 aa8.96□□□□□ -0.97
ACTN1-216ENST00000556083 TMEM170BQ5T4T1 132 aa8.96□□□□□ -0.97
ACTN1-216ENST00000556083 Q6ZS49 121 aa8.96□□□□□ -0.97
ACTN1-216ENST00000556083 LINC01587Q99440 93 aa8.96□□□□□ -0.97
ACTN1-216ENST00000556083 CYSLTR1Q9Y271 337 aa8.96□□□□□ -0.97
ACTN1-216ENST00000556083 NRXN2Q9P2S2 1712 aa8.96□□□□□ -0.97
ACTN1-216ENST00000556083 MSGN1A6NI15 193 aa8.96□□□□□ -0.97
ACTN1-216ENST00000556083 AMBPP02760 352 aa8.96□□□□□ -0.97
ACTN1-216ENST00000556083 IGFBP2P18065 325 aa8.96□□□□□ -0.97
ACTN1-216ENST00000556083 CRYGSP22914 178 aa8.96□□□□□ -0.97
ACTN1-216ENST00000556083 COLCA1Q6ZS62 124 aa8.96□□□□□ -0.97
ACTN1-216ENST00000556083 CHCHD1Q96BP2 118 aaKnown RBP8.96□□□□□ -0.97
ACTN1-216ENST00000556083 CEP290O15078 2479 aa8.96□□□□□ -0.97
ACTN1-216ENST00000556083 KLK2P20151 261 aa8.96□□□□□ -0.98
ACTN1-216ENST00000556083 FHITP49789 147 aa8.96□□□□□ -0.98
ACTN1-216ENST00000556083 LDLRAD2Q5SZI1 272 aa8.96□□□□□ -0.98
ACTN1-216ENST00000556083 CRIPAKQ8N1N5 446 aa8.96□□□□□ -0.98
ACTN1-216ENST00000556083 WFDC6Q9BQY6 131 aa8.96□□□□□ -0.98
ACTN1-216ENST00000556083 PRDM13Q9H4Q3 707 aa8.96□□□□□ -0.98
ACTN1-216ENST00000556083 ICE1Q9Y2F5 2266 aa8.96□□□□□ -0.98
ACTN1-216ENST00000556083 A0A1B0GW64 132 aa8.96□□□□□ -0.98
ACTN1-216ENST00000556083 C7orf71A4D174 169 aa8.96□□□□□ -0.98
ACTN1-216ENST00000556083 C9orf139Q6ZV77 190 aa8.96□□□□□ -0.98
ACTN1-216ENST00000556083 SPRED2Q7Z698 418 aa8.96□□□□□ -0.98
ACTN1-216ENST00000556083 GTSCR1Q86UQ5 136 aa8.96□□□□□ -0.98
ACTN1-216ENST00000556083 DPH3Q96FX2 82 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms