RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 VCX3AQ9NNX9 186 aa14.67□□□□□ -0.06
PRKCH-219ENST00000555906 FKBP11Q9NYL4 201 aa14.67□□□□□ -0.06
PRKCH-219ENST00000555906 IGHV3-21A0A0B4J1V1 117 aa14.66□□□□□ -0.06
PRKCH-219ENST00000555906 K7EMT4 169 aa14.66□□□□□ -0.06
PRKCH-219ENST00000555906 ADMP35318 185 aa14.66□□□□□ -0.06
PRKCH-219ENST00000555906 ODF3L2Q3SX64 289 aa14.66□□□□□ -0.06
PRKCH-219ENST00000555906 SLC25A46Q96AG3 418 aa14.66□□□□□ -0.06
PRKCH-219ENST00000555906 UBQLN2Q9UHD9 624 aa14.66□□□□□ -0.06
PRKCH-219ENST00000555906 OR4C46A6NHA9 309 aa14.65□□□□□ -0.06
PRKCH-219ENST00000555906 C15orf62A8K5M9 175 aa14.65□□□□□ -0.06
PRKCH-219ENST00000555906 S100GP29377 79 aa14.65□□□□□ -0.06
PRKCH-219ENST00000555906 BMI1P35226 326 aa14.65□□□□□ -0.06
PRKCH-219ENST00000555906 LSM3P62310 102 aaKnown RBP14.65□□□□□ -0.06
PRKCH-219ENST00000555906 Q56UQ5 140 aa14.65□□□□□ -0.06
PRKCH-219ENST00000555906 UBAC2Q8NBM4 344 aa14.65□□□□□ -0.06
PRKCH-219ENST00000555906 OR1P1Q8NH06 330 aa14.65□□□□□ -0.06
PRKCH-219ENST00000555906 GPX8Q8TED1 209 aa14.65□□□□□ -0.06
PRKCH-219ENST00000555906 C20orf24Q9BUV8 137 aa14.65□□□□□ -0.06
PRKCH-219ENST00000555906 KIR2DL5BA0A0G2JN68 375 aa14.64□□□□□ -0.07
PRKCH-219ENST00000555906 KIR2DL5BA0A0G2JPC4 375 aa14.64□□□□□ -0.07
PRKCH-219ENST00000555906 DBX1A6NMT0 343 aa14.64□□□□□ -0.07
PRKCH-219ENST00000555906 UBE2CO00762 179 aa14.64□□□□□ -0.07
PRKCH-219ENST00000555906 EIF4EP06730 217 aaKnown RBP14.64□□□□□ -0.07
PRKCH-219ENST00000555906 HLA-DMAP28067 261 aa14.64□□□□□ -0.07
PRKCH-219ENST00000555906 TNFRSF9Q07011 255 aa14.64□□□□□ -0.07
PRKCH-219ENST00000555906 DEFB135Q30KP9 77 aa14.64□□□□□ -0.07
PRKCH-219ENST00000555906 PHLDA2Q53GA4 152 aa14.64□□□□□ -0.07
PRKCH-219ENST00000555906 LPCAT3Q6P1A2 487 aa14.64□□□□□ -0.07
PRKCH-219ENST00000555906 LYSMD2Q8IV50 215 aa14.64□□□□□ -0.07
PRKCH-219ENST00000555906 KIR2DL5AQ8N109 375 aa14.64□□□□□ -0.07
PRKCH-219ENST00000555906 KIR2DL5BQ8NHK3 375 aa14.64□□□□□ -0.07
PRKCH-219ENST00000555906 SCPEP1Q9HB40 452 aa14.64□□□□□ -0.07
PRKCH-219ENST00000555906 A0A087WXM4 84 aa14.63□□□□□ -0.07
PRKCH-219ENST00000555906 FCGR2BP31994 310 aaPredicted RBP14.63□□□□□ -0.07
PRKCH-219ENST00000555906 RELQ04864 619 aaPredicted RBP14.63□□□□□ -0.07
PRKCH-219ENST00000555906 TBC1D26Q86UD7 250 aa14.63□□□□□ -0.07
PRKCH-219ENST00000555906 ZNF114Q8NC26 417 aa14.63□□□□□ -0.07
PRKCH-219ENST00000555906 LINC00476Q8WZB0 136 aa14.63□□□□□ -0.07
PRKCH-219ENST00000555906 CMTM3Q96MX0 182 aa14.63□□□□□ -0.07
PRKCH-219ENST00000555906 IGHV3OR16-8A0A075B7F1 116 aa14.62□□□□□ -0.07
PRKCH-219ENST00000555906 A0A0J9YWU9 116 aa14.62□□□□□ -0.07
PRKCH-219ENST00000555906 NUPR2A6NF83 97 aa14.62□□□□□ -0.07
PRKCH-219ENST00000555906 SPRY2O43597 315 aa14.62□□□□□ -0.07
PRKCH-219ENST00000555906 APOA1P02647 267 aa14.62□□□□□ -0.07
PRKCH-219ENST00000555906 CTSGP08311 255 aa14.62□□□□□ -0.07
PRKCH-219ENST00000555906 ATF4P18848 351 aaPredicted RBP14.62□□□□□ -0.07
PRKCH-219ENST00000555906 RCVRNP35243 200 aa14.62□□□□□ -0.07
PRKCH-219ENST00000555906 TSPAN5P62079 268 aa14.62□□□□□ -0.07
PRKCH-219ENST00000555906 LYG2Q86SG7 212 aa14.62□□□□□ -0.07
PRKCH-219ENST00000555906 ZNF414Q96IQ9 312 aa14.62□□□□□ -0.07
PRKCH-219ENST00000555906 SEC22AQ96IW7 307 aa14.62□□□□□ -0.07
PRKCH-219ENST00000555906 CXorf65A6NEN9 183 aa14.61□□□□□ -0.07
PRKCH-219ENST00000555906 I3L2K1 104 aa14.61□□□□□ -0.07
PRKCH-219ENST00000555906 NUPL2O15504 423 aaKnown RBP14.61□□□□□ -0.07
PRKCH-219ENST00000555906 ZNF207O43670 478 aaKnown RBP14.61□□□□□ -0.07
PRKCH-219ENST00000555906 TNFAIP8O95379 198 aa14.61□□□□□ -0.07
PRKCH-219ENST00000555906 CTSDP07339 412 aaPredicted RBP14.61□□□□□ -0.07
PRKCH-219ENST00000555906 UCP3P55916 312 aa14.61□□□□□ -0.07
PRKCH-219ENST00000555906 PRCDQ00LT1 54 aa14.61□□□□□ -0.07
PRKCH-219ENST00000555906 STPG3Q8N7X2 389 aa14.61□□□□□ -0.07
PRKCH-219ENST00000555906 GALNT14Q96FL9 552 aa14.61□□□□□ -0.07
PRKCH-219ENST00000555906 OR10C1Q96KK4 312 aa14.61□□□□□ -0.07
PRKCH-219ENST00000555906 TXN2Q99757 166 aa14.61□□□□□ -0.07
PRKCH-219ENST00000555906 IGHV7-4-1A0A0J9YVY3 117 aa14.6□□□□□ -0.07
PRKCH-219ENST00000555906 IGKV1-39P01597 117 aa14.6□□□□□ -0.07
PRKCH-219ENST00000555906 IGKV1D-39P04432 117 aa14.6□□□□□ -0.07
PRKCH-219ENST00000555906 PMS2P11Q13670 270 aa14.6□□□□□ -0.07
PRKCH-219ENST00000555906 H2BFWTQ7Z2G1 175 aa14.6□□□□□ -0.07
PRKCH-219ENST00000555906 OR4A16Q8NH70 328 aa14.6□□□□□ -0.07
PRKCH-219ENST00000555906 MRGPRFQ96AM1 343 aa14.6□□□□□ -0.07
PRKCH-219ENST00000555906 RNF183Q96D59 192 aa14.6□□□□□ -0.07
PRKCH-219ENST00000555906 MISP3Q96FF7 219 aa14.6□□□□□ -0.07
PRKCH-219ENST00000555906 COMMD3Q9UBI1 195 aa14.6□□□□□ -0.07
PRKCH-219ENST00000555906 SMPXQ9UHP9 88 aa14.6□□□□□ -0.07
PRKCH-219ENST00000555906 SMIM31A0A1B0GVY4 71 aa14.59□□□□□ -0.07
PRKCH-219ENST00000555906 MFAP4P55083 255 aa14.59□□□□□ -0.07
PRKCH-219ENST00000555906 NCS1P62166 190 aa14.59□□□□□ -0.07
PRKCH-219ENST00000555906 EWSR1Q01844 656 aaKnown RBP eCLIP14.59□□□□□ -0.07
PRKCH-219ENST00000555906 SNX29P2Q8IUI4 249 aa14.59□□□□□ -0.07
PRKCH-219ENST00000555906 RNF2Q99496 336 aa14.59□□□□□ -0.07
PRKCH-219ENST00000555906 NXF2Q9GZY0 626 aaKnown RBP14.59□□□□□ -0.07
PRKCH-219ENST00000555906 CHEK1O14757 476 aa14.58□□□□□ -0.08
PRKCH-219ENST00000555906 MT-CO2P00403 227 aa14.58□□□□□ -0.08
PRKCH-219ENST00000555906 TMEM116Q8NCL8 245 aa14.58□□□□□ -0.08
PRKCH-219ENST00000555906 RHPN1-AS1Q9BWJ2 59 aa14.58□□□□□ -0.08
PRKCH-219ENST00000555906 C6orf62Q9GZU0 229 aaPredicted RBP14.58□□□□□ -0.08
PRKCH-219ENST00000555906 MAP6D1Q9H9H5 199 aa14.58□□□□□ -0.08
PRKCH-219ENST00000555906 RPL35AP18077 110 aaKnown RBP14.57□□□□□ -0.08
PRKCH-219ENST00000555906 TMEM217Q8N7C4 229 aa14.57□□□□□ -0.08
PRKCH-219ENST00000555906 FUNDC2Q9BWH2 189 aa14.57□□□□□ -0.08
PRKCH-219ENST00000555906 KMT2AQ03164 3969 aa14.57□□□□□ -0.08
PRKCH-219ENST00000555906 FRAS1Q86XX4 4008 aa14.57□□□□□ -0.08
PRKCH-219ENST00000555906 GNG7O60262 68 aa14.56□□□□□ -0.08
PRKCH-219ENST00000555906 YIF1AO95070 293 aa14.56□□□□□ -0.08
PRKCH-219ENST00000555906 ELK1P19419 428 aa14.56□□□□□ -0.08
PRKCH-219ENST00000555906 CMC4P56277 68 aaPredicted RBP14.56□□□□□ -0.08
PRKCH-219ENST00000555906 RND3P61587 244 aa14.56□□□□□ -0.08
PRKCH-219ENST00000555906 HSPE1P61604 102 aaKnown RBP14.56□□□□□ -0.08
PRKCH-219ENST00000555906 ZNF486Q96H40 463 aaPredicted RBP14.56□□□□□ -0.08
PRKCH-219ENST00000555906 TRAV14DV4A0A0A6YYC5 116 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms