RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 A0A0G2JRQ6 117 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 A0A1B0GX51 115 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 A8MWP6 167 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 C1orf196B1AJZ1 125 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 H0Y9J4 135 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 NME4O00746 187 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 FGF1P05230 155 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 IL3P08700 152 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 MRPL3P09001 348 aaKnown RBP2.27□□□□□ -2.05
SRP54-209ENST00000555746 TRAPPC2P0DI81 140 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 TRAPPC2BP0DI82 140 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 ZNF250P15622 560 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 ATF1P18846 271 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 CDK2P24941 298 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 NPY1RP25929 384 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 PSMB9P28065 219 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 S100A2P29034 98 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 GALR1P47211 349 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 NCS1P62166 190 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 RPS28P62857 69 aaKnown RBP2.27□□□□□ -2.05
SRP54-209ENST00000555746 RUNX1Q01196 453 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 ZNF763Q0D2J5 394 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 PLCXD2Q0VAA5 305 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 CLINT1Q14677 625 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 EBPQ15125 230 aaKnown RBP2.27□□□□□ -2.05
SRP54-209ENST00000555746 SSX1Q16384 188 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 GUCA2BQ16661 112 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 DEFB113Q30KQ7 82 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 SCGB2B2Q4G0G5 96 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 VAX1Q5SQQ9 334 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 COL5A1-AS1Q5SY13 56 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 ARL9Q6T311 187 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 EPGNQ6UW88 154 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 ZNF620Q6ZNG0 422 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 MRPL55Q7Z7F7 128 aaKnown RBP2.27□□□□□ -2.05
SRP54-209ENST00000555746 OR10R2Q8NGX6 335 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 PIFOQ8TCI5 191 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 ZNF675Q8TD23 568 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 CHCHD10Q8WYQ3 142 aaPredicted RBP2.27□□□□□ -2.05
SRP54-209ENST00000555746 SLC7A6Q92536 515 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 RBPMSQ93062 196 aaKnown RBP2.27□□□□□ -2.05
SRP54-209ENST00000555746 PTX4Q96A99 478 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 APOBEC3DQ96AK3 386 aaPredicted RBP2.27□□□□□ -2.05
SRP54-209ENST00000555746 ACY3Q96HD9 319 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 SLC35E1Q96K37 410 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 PGLYRP4Q96LB8 373 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 PGLYRP3Q96LB9 341 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 OR4K3Q96R72 315 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 TP53RKQ96S44 253 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 SORT1Q99523 831 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 PSMG3Q9BT73 122 aaPredicted RBP2.27□□□□□ -2.05
SRP54-209ENST00000555746 ULBP3Q9BZM4 244 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 C20orf27Q9GZN8 174 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 SH3BGRL3Q9H299 93 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 LINC00597Q9H2U6 94 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 METTL17Q9H7H0 456 aaPredicted RBP2.27□□□□□ -2.05
SRP54-209ENST00000555746 VSIRQ9H7M9 311 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 GPR84Q9NQS5 396 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 MRPL16Q9NX20 251 aaKnown RBP2.27□□□□□ -2.05
SRP54-209ENST00000555746 BTRCQ9Y297 605 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 HDGFL3Q9Y3E1 203 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 UGT2A1Q9Y4X1 527 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 OR51B2Q9Y5P1 312 aa2.27□□□□□ -2.05
SRP54-209ENST00000555746 TRAV39A0A0B4J263 110 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 A0A0G2JLM5 398 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 A0A0J9YY10 115 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 A0A0U1RQV1 116 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 FAM240AA0A1B0GVK7 77 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 A0A1B0GX78 115 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 WI2-2373I1.2A0A1W2PRP0 233 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 RBMY1BA6NDE4 496 aaKnown RBP2.26□□□□□ -2.05
SRP54-209ENST00000555746 RBMY1EA6NEQ0 496 aaKnown RBP2.26□□□□□ -2.05
SRP54-209ENST00000555746 INMT-MINDY4F8WBC2 141 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 SMKR1H3BMG3 65 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 GFYI3L273 518 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 M0R2Z0 102 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 DNASE2O00115 360 aaPredicted RBP2.26□□□□□ -2.05
SRP54-209ENST00000555746 ZNF780AO75290 641 aaPredicted RBP2.26□□□□□ -2.05
SRP54-209ENST00000555746 IGHV2-5P01817 119 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 HBZP02008 142 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 TTRP02766 147 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 OPN1SWP03999 348 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 PFN1P07737 140 aaKnown RBP2.26□□□□□ -2.05
SRP54-209ENST00000555746 UCHL1P09936 223 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 OR5G3P0C626 314 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 RBMY1DP0C7P1 496 aaKnown RBP2.26□□□□□ -2.05
SRP54-209ENST00000555746 GKN3PP0CG01 181 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 SMIM17P0DL12 118 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 PSG2P11465 335 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 AZU1P20160 251 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 EVI2AP22794 236 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 GABRA2P47869 451 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 REG1BP48304 166 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 UBE2E1P51965 193 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 CDK6Q00534 326 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 HERPUD1Q15011 391 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 IAH1Q2TAA2 248 aaPredicted RBP2.26□□□□□ -2.05
SRP54-209ENST00000555746 C2orf83Q53S99 150 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 LDLRAD2Q5SZI1 272 aa2.26□□□□□ -2.05
SRP54-209ENST00000555746 CASC10Q5T4H9 136 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms