RNA–Protein interactions for RNA: ENST00000555116.5

SHMT2-217, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-217ENST00000555116 B3GALNT1O75752 331 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 PIGPP57054 158 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 RAB14P61106 215 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 OR2F1Q13607 317 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 OR5T1Q8NG75 326 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 OR4A5Q8NH83 315 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 OR10C1Q96KK4 312 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 MBD2Q9UBB5 411 aa11.06□□□□□ -0.64
SHMT2-217ENST00000555116 NOTCH1P46531 2555 aa11.05□□□□□ -0.64
SHMT2-217ENST00000555116 TRAV3A0A0B4J244 114 aa11.05□□□□□ -0.64
SHMT2-217ENST00000555116 UPK2O00526 184 aa11.05□□□□□ -0.64
SHMT2-217ENST00000555116 ACTL6BO94805 426 aa11.05□□□□□ -0.64
SHMT2-217ENST00000555116 MAS1LP35410 378 aa11.05□□□□□ -0.64
SHMT2-217ENST00000555116 SLC51BQ86UW2 128 aa11.05□□□□□ -0.64
SHMT2-217ENST00000555116 UBE2E2Q96LR5 201 aa11.05□□□□□ -0.64
SHMT2-217ENST00000555116 C2orf50Q96LR7 162 aa11.05□□□□□ -0.64
SHMT2-217ENST00000555116 RNF126Q9BV68 326 aa11.05□□□□□ -0.64
SHMT2-217ENST00000555116 GNB4Q9HAV0 340 aa11.05□□□□□ -0.64
SHMT2-217ENST00000555116 TMEM140Q9NV12 185 aa11.05□□□□□ -0.64
SHMT2-217ENST00000555116 A0A1B0GW64 132 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 E7EUB6 86 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 HOXB5P09067 269 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 APELAP0DMC3 54 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 MYOD1P15172 320 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 RPL8P62917 257 aaKnown RBP11.04□□□□□ -0.64
SHMT2-217ENST00000555116 WFDC9Q8NEX5 89 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 LRRC20Q8TCA0 184 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 C4orf3Q8WVX3 66 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 PCNPQ8WW12 178 aaKnown RBP11.04□□□□□ -0.64
SHMT2-217ENST00000555116 RAX2Q96IS3 184 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 NAA60Q9H7X0 242 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 KCNIP3Q9Y2W7 256 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 MARCH11A6NNE9 402 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 TEX22C9J3V5 150 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 H0YIZ8 118 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 IGKV1-39P01597 117 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 PF4P02776 101 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 IGKV1D-39P04432 117 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 RPL27AP46776 148 aaKnown RBP11.04□□□□□ -0.64
SHMT2-217ENST00000555116 IL15RAQ13261 267 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 ALKAL2Q6UX46 152 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 INO80EQ8NBZ0 244 aaPredicted RBP11.04□□□□□ -0.64
SHMT2-217ENST00000555116 DMBX1Q8NFW5 382 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 SCARB1Q8WTV0 552 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 GALNT14Q96FL9 552 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 MS4A10Q96PG2 267 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 P2RX4Q99571 388 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 SPIN2AQ99865 258 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 SPIN2BQ9BPZ2 258 aa11.04□□□□□ -0.64
SHMT2-217ENST00000555116 KANTRA0A1W2PQU2 76 aa11.03□□□□□ -0.64
SHMT2-217ENST00000555116 CGB1A6NKQ9 187 aa11.03□□□□□ -0.64
SHMT2-217ENST00000555116 H3BUA1 57 aa11.03□□□□□ -0.64
SHMT2-217ENST00000555116 BCL2L11O43521 198 aa11.03□□□□□ -0.64
SHMT2-217ENST00000555116 BRI3O95415 125 aa11.03□□□□□ -0.64
SHMT2-217ENST00000555116 KRASP01116 189 aa11.03□□□□□ -0.64
SHMT2-217ENST00000555116 G6PCP35575 357 aa11.03□□□□□ -0.64
SHMT2-217ENST00000555116 MYCNOSP40205 109 aa11.03□□□□□ -0.64
SHMT2-217ENST00000555116 ERVK-16P61578 105 aa11.03□□□□□ -0.64
SHMT2-217ENST00000555116 RUNX1Q01196 453 aa11.03□□□□□ -0.64
SHMT2-217ENST00000555116 TMEM187Q14656 261 aa11.03□□□□□ -0.64
SHMT2-217ENST00000555116 DEFB136Q30KP8 78 aa11.03□□□□□ -0.64
SHMT2-217ENST00000555116 TOR2AQ5JU69 321 aa11.03□□□□□ -0.64
SHMT2-217ENST00000555116 LINC00482Q8N8I6 264 aa11.03□□□□□ -0.64
SHMT2-217ENST00000555116 DUX3Q96PT4 197 aa11.03□□□□□ -0.64
SHMT2-217ENST00000555116 TP53RKQ96S44 253 aa11.03□□□□□ -0.64
SHMT2-217ENST00000555116 H0Y980 276 aa11.02□□□□□ -0.64
SHMT2-217ENST00000555116 I3L521 148 aa11.02□□□□□ -0.64
SHMT2-217ENST00000555116 CCL24O00175 119 aa11.02□□□□□ -0.64
SHMT2-217ENST00000555116 FGF2P09038 288 aa11.02□□□□□ -0.64
SHMT2-217ENST00000555116 OR5AC1P0C628 307 aa11.02□□□□□ -0.64
SHMT2-217ENST00000555116 OR9G9P0C7N8 305 aa11.02□□□□□ -0.64
SHMT2-217ENST00000555116 LYL1P12980 280 aa11.02□□□□□ -0.64
SHMT2-217ENST00000555116 TPPP2P59282 170 aa11.02□□□□□ -0.64
SHMT2-217ENST00000555116 MRPL41Q8IXM3 137 aaKnown RBP11.02□□□□□ -0.64
SHMT2-217ENST00000555116 CCDC71LQ8N9Z2 235 aa11.02□□□□□ -0.64
SHMT2-217ENST00000555116 DCUN1D4Q92564 292 aa11.02□□□□□ -0.64
SHMT2-217ENST00000555116 C3orf85A0A1B0GTC6 90 aa11.02□□□□□ -0.65
SHMT2-217ENST00000555116 LOC105371267A0A1B0GV96 52 aa11.02□□□□□ -0.65
SHMT2-217ENST00000555116 TRGV3P03979 118 aa11.02□□□□□ -0.65
SHMT2-217ENST00000555116 OR2B8PP59922 312 aa11.02□□□□□ -0.65
SHMT2-217ENST00000555116 SP6Q3SY56 376 aa11.02□□□□□ -0.65
SHMT2-217ENST00000555116 SMUG1Q53HV7 270 aa11.02□□□□□ -0.65
SHMT2-217ENST00000555116 PRSS54Q6PEW0 395 aa11.02□□□□□ -0.65
SHMT2-217ENST00000555116 TTC9CQ8N5M4 171 aa11.02□□□□□ -0.65
SHMT2-217ENST00000555116 ST8SIA2Q92186 375 aa11.02□□□□□ -0.65
SHMT2-217ENST00000555116 RRNAD1Q96FB5 475 aaKnown RBP11.02□□□□□ -0.65
SHMT2-217ENST00000555116 OR5B12Q96R08 314 aa11.02□□□□□ -0.65
SHMT2-217ENST00000555116 ZNF355PQ9NSJ1 428 aa11.02□□□□□ -0.65
SHMT2-217ENST00000555116 GSKIPQ9P0R6 139 aa11.02□□□□□ -0.65
SHMT2-217ENST00000555116 IFNA21P01568 189 aa11.01□□□□□ -0.65
SHMT2-217ENST00000555116 RAB32Q13637 225 aa11.01□□□□□ -0.65
SHMT2-217ENST00000555116 IAH1Q2TAA2 248 aaPredicted RBP11.01□□□□□ -0.65
SHMT2-217ENST00000555116 GGNBP1Q5YKI7 109 aa11.01□□□□□ -0.65
SHMT2-217ENST00000555116 LRTM2Q8N967 370 aa11.01□□□□□ -0.65
SHMT2-217ENST00000555116 GLYATL2Q8WU03 294 aa11.01□□□□□ -0.65
SHMT2-217ENST00000555116 COA4Q9NYJ1 87 aa11.01□□□□□ -0.65
SHMT2-217ENST00000555116 OR5AC2Q9NZP5 309 aa11.01□□□□□ -0.65
SHMT2-217ENST00000555116 RBMXL2O75526 392 aaKnown RBP11□□□□□ -0.65
SHMT2-217ENST00000555116 RLN2P04090 185 aa11□□□□□ -0.65
SHMT2-217ENST00000555116 SERPINE2P07093 398 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms