RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 PLXND1Q9Y4D7 1925 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 PTPRJQ12913 1337 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 NACAE9PAV3 2078 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 YEATS2Q9ULM3 1422 aa3.1□□□□□ -1.91
VRK1-203ENST00000555067 SIPA1L1O43166 1804 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 ZCCHC11Q5TAX3 1644 aaKnown RBP3.09□□□□□ -1.91
VRK1-203ENST00000555067 DHRS12A0PJE2 317 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 TRAPPC2LH3BP13 241 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 K7EM74 188 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 ZNF73O43830 326 aaPredicted RBP3.09□□□□□ -1.91
VRK1-203ENST00000555067 OR2J2O76002 312 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 PRM2P04554 102 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 ZNF80P51504 273 aaPredicted RBP3.09□□□□□ -1.91
VRK1-203ENST00000555067 EMP1P54849 157 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 KLF3P57682 345 aaPredicted RBP3.09□□□□□ -1.91
VRK1-203ENST00000555067 TAS2R20P59543 309 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 RPS11P62280 158 aaKnown RBP eCLIP3.09□□□□□ -1.91
VRK1-203ENST00000555067 FAM229BQ4G0N7 80 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 ZNF880Q6PDB4 577 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 TCF24Q7RTU0 167 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 Q8N9L7 120 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 ZNF675Q8TD23 568 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 MBD3L1Q8WWY6 194 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 LZICQ8WZA0 190 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 CCDC115Q96NT0 180 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 DERL1Q9BUN8 251 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 MCTS1Q9ULC4 181 aaKnown RBP3.09□□□□□ -1.91
VRK1-203ENST00000555067 MAST2Q6P0Q8 1798 aa3.09□□□□□ -1.91
VRK1-203ENST00000555067 ZNF106Q9H2Y7 1883 aaKnown RBP3.09□□□□□ -1.92
VRK1-203ENST00000555067 FMN1Q68DA7 1419 aa3.09□□□□□ -1.92
VRK1-203ENST00000555067 CACNA1SQ13698 1873 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 BUB1B-PAK6H3BSN5 160 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 LEPROTO15243 131 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 SOD1P00441 154 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 IFNA10P01566 189 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 IGHV3-53P01767 116 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 APOA2P02652 100 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 BLVRBP30043 206 aaPredicted RBP3.08□□□□□ -1.92
VRK1-203ENST00000555067 RBM11P57052 281 aaKnown RBP3.08□□□□□ -1.92
VRK1-203ENST00000555067 TAS2R30P59541 319 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 SCGB2B2Q4G0G5 96 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 RPL22L1Q6P5R6 122 aaKnown RBP3.08□□□□□ -1.92
VRK1-203ENST00000555067 ZNF322Q6U7Q0 402 aaPredicted RBP3.08□□□□□ -1.92
VRK1-203ENST00000555067 KTN1-AS1Q86SY8 53 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 MUC7Q8TAX7 377 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 THEM6Q8WUY1 208 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 C2orf50Q96LR7 162 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 TM2D3Q9BRN9 247 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 CCDC32Q9BV29 185 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 MND1Q9BWT6 205 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 TMEM138Q9NPI0 162 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 JPT1Q9UK76 154 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 UHRF1BP1Q6BDS2 1440 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 ARAP1Q96P48 1450 aa3.08□□□□□ -1.92
VRK1-203ENST00000555067 IGHV3OR16-8A0A075B7F1 116 aa3.07□□□□□ -1.92
VRK1-203ENST00000555067 MDFIC2A0A1B0GVS7 189 aa3.07□□□□□ -1.92
VRK1-203ENST00000555067 GGT3PA6NGU5 568 aa3.07□□□□□ -1.92
VRK1-203ENST00000555067 C17orf51A8MQB3 221 aa3.07□□□□□ -1.92
VRK1-203ENST00000555067 IGHV1-69P01742 117 aa3.07□□□□□ -1.92
VRK1-203ENST00000555067 HLA-DMBP28068 263 aa3.07□□□□□ -1.92
VRK1-203ENST00000555067 CCDC153Q494R4 210 aa3.07□□□□□ -1.92
VRK1-203ENST00000555067 KPRPQ5T749 579 aaPredicted RBP3.07□□□□□ -1.92
VRK1-203ENST00000555067 LYRM7Q5U5X0 104 aa3.07□□□□□ -1.92
VRK1-203ENST00000555067 Q6P435 159 aa3.07□□□□□ -1.92
VRK1-203ENST00000555067 LCA10Q71F78 164 aa3.07□□□□□ -1.92
VRK1-203ENST00000555067 OR5C1Q8NGR4 320 aa3.07□□□□□ -1.92
VRK1-203ENST00000555067 CLDND2Q8NHS1 167 aa3.07□□□□□ -1.92
VRK1-203ENST00000555067 IMUPQ9GZP8 106 aa3.07□□□□□ -1.92
VRK1-203ENST00000555067 SMDT1Q9H4I9 107 aa3.07□□□□□ -1.92
VRK1-203ENST00000555067 PCTPQ9UKL6 214 aa3.07□□□□□ -1.92
VRK1-203ENST00000555067 NCOA3Q9Y6Q9 1424 aa3.07□□□□□ -1.92
VRK1-203ENST00000555067 PLA2R1Q13018 1463 aa3.07□□□□□ -1.92
VRK1-203ENST00000555067 IGLV3-16A0A075B6K0 115 aa3.06□□□□□ -1.92
VRK1-203ENST00000555067 IGLV3-12A0A075B6K2 115 aa3.06□□□□□ -1.92
VRK1-203ENST00000555067 TRAV38-1A0A0B4J264 116 aa3.06□□□□□ -1.92
VRK1-203ENST00000555067 M0QZK8 103 aa3.06□□□□□ -1.92
VRK1-203ENST00000555067 RPL7P18124 248 aaKnown RBP3.06□□□□□ -1.92
VRK1-203ENST00000555067 CASP1P29466 404 aa3.06□□□□□ -1.92
VRK1-203ENST00000555067 GTF2A1P52655 376 aaPredicted RBP3.06□□□□□ -1.92
VRK1-203ENST00000555067 CDC42P60953 191 aa3.06□□□□□ -1.92
VRK1-203ENST00000555067 MEF2BQ02080 365 aaPredicted RBP3.06□□□□□ -1.92
VRK1-203ENST00000555067 HTR4Q13639 388 aa3.06□□□□□ -1.92
VRK1-203ENST00000555067 C2orf91Q6ZV80 131 aa3.06□□□□□ -1.92
VRK1-203ENST00000555067 OR52R1Q8NGF1 315 aa3.06□□□□□ -1.92
VRK1-203ENST00000555067 TCEAL4Q96EI5 215 aa3.06□□□□□ -1.92
VRK1-203ENST00000555067 ZNF407Q9C0G0 2248 aa3.06□□□□□ -1.92
VRK1-203ENST00000555067 OR2J1Q9GZK6 312 aa3.06□□□□□ -1.92
VRK1-203ENST00000555067 OR8D2Q9GZM6 311 aa3.06□□□□□ -1.92
VRK1-203ENST00000555067 TRPM3Q9HCF6 1732 aaPredicted RBP3.06□□□□□ -1.92
VRK1-203ENST00000555067 SPANXA1Q9NS26 97 aa3.06□□□□□ -1.92
VRK1-203ENST00000555067 TECPR2O15040 1411 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 IGHV3-73A0A0B4J1V6 119 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 LOC102725191A0A1B0GVB3 256 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 DUXBA0A1W2PPF3 345 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 GRIFINA4D1Z8 144 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 ARL5CA6NH57 179 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 C17orf98A8MV24 154 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 C1orf196B1AJZ1 125 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 CST8O60676 142 aa3.05□□□□□ -1.92
VRK1-203ENST00000555067 LGALSLQ3ZCW2 172 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms