RNA–Protein interactions for RNA: ENST00000554997.1

SYNE2-215, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 711 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-215ENST00000554997 HEYLQ9NQ87 328 aaPredicted RBP7.98□□□□□ -1.13
SYNE2-215ENST00000554997 ZFP57Q9NU63 452 aa7.98□□□□□ -1.13
SYNE2-215ENST00000554997 FBXO24O75426 580 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 NXPH3O95157 252 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 DEFA4P12838 97 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 HIST1H1BP16401 226 aaKnown RBP7.97□□□□□ -1.13
SYNE2-215ENST00000554997 PSMB8P28062 276 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 HOXA1P49639 335 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-215ENST00000554997 RAB9AP51151 201 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 SUB1P53999 127 aaKnown RBP eCLIP7.97□□□□□ -1.13
SYNE2-215ENST00000554997 POLR2GP62487 172 aaKnown RBP eCLIP7.97□□□□□ -1.13
SYNE2-215ENST00000554997 BSXQ3C1V8 233 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 AWAT1Q58HT5 328 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 PVRIGQ6DKI7 326 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 TMEM65Q6PI78 240 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 RNF152Q8N8N0 203 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 ZNF114Q8NC26 417 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 OR11H7Q8NGC8 314 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 OR1P1Q8NH06 330 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 ASB13Q8WXK3 278 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 SMIM8Q96KF7 97 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 CIB3Q96Q77 187 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-215ENST00000554997 ZNF436Q9C0F3 470 aaPredicted RBP7.97□□□□□ -1.13
SYNE2-215ENST00000554997 MAGT1Q9H0U3 335 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 SLA2Q9H6Q3 261 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 ZNF355PQ9NSJ1 428 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 U3KQ87 197 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 FBN1P35555 2871 aaKnown RBP7.97□□□□□ -1.13
SYNE2-215ENST00000554997 COL6A5A8TX70 2615 aa7.97□□□□□ -1.13
SYNE2-215ENST00000554997 TRBV9A0A0B4J1U6 114 aa7.96□□□□□ -1.14
SYNE2-215ENST00000554997 WRBO00258 174 aa7.96□□□□□ -1.14
SYNE2-215ENST00000554997 CYB5BO43169 146 aa7.96□□□□□ -1.14
SYNE2-215ENST00000554997 REG1AP05451 166 aa7.96□□□□□ -1.14
SYNE2-215ENST00000554997 HTR2BP41595 481 aa7.96□□□□□ -1.14
SYNE2-215ENST00000554997 TAS2R30P59541 319 aa7.96□□□□□ -1.14
SYNE2-215ENST00000554997 RPP30P78346 268 aaKnown RBP7.96□□□□□ -1.14
SYNE2-215ENST00000554997 RAB32Q13637 225 aa7.96□□□□□ -1.14
SYNE2-215ENST00000554997 TCTEX1D4Q5JR98 221 aa7.96□□□□□ -1.14
SYNE2-215ENST00000554997 C10orf99Q6UWK7 81 aa7.96□□□□□ -1.14
SYNE2-215ENST00000554997 NOXA1Q86UR1 476 aa7.96□□□□□ -1.14
SYNE2-215ENST00000554997 MS4A10Q96PG2 267 aa7.96□□□□□ -1.14
SYNE2-215ENST00000554997 FANCD2OSQ96PS1 177 aa7.96□□□□□ -1.14
SYNE2-215ENST00000554997 RAB40CQ96S21 281 aa7.96□□□□□ -1.14
SYNE2-215ENST00000554997 P2RX4Q99571 388 aa7.96□□□□□ -1.14
SYNE2-215ENST00000554997 KLK15Q9H2R5 256 aa7.96□□□□□ -1.14
SYNE2-215ENST00000554997 THYN1Q9P016 225 aa7.96□□□□□ -1.14
SYNE2-215ENST00000554997 F11RQ9Y624 299 aaKnown RBP7.96□□□□□ -1.14
SYNE2-215ENST00000554997 K7EPK0 472 aa7.95□□□□□ -1.14
SYNE2-215ENST00000554997 SCGB1D2O95969 90 aa7.95□□□□□ -1.14
SYNE2-215ENST00000554997 IFNA10P01566 189 aa7.95□□□□□ -1.14
SYNE2-215ENST00000554997 RLN2P04090 185 aa7.95□□□□□ -1.14
SYNE2-215ENST00000554997 RNASE2P10153 161 aaKnown RBP7.95□□□□□ -1.14
SYNE2-215ENST00000554997 PF4V1P10720 104 aa7.95□□□□□ -1.14
SYNE2-215ENST00000554997 PAX9P55771 341 aa7.95□□□□□ -1.14
SYNE2-215ENST00000554997 KRTAP10-3P60369 221 aa7.95□□□□□ -1.14
SYNE2-215ENST00000554997 CD83Q01151 205 aa7.95□□□□□ -1.14
SYNE2-215ENST00000554997 KIAA0141Q14154 515 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-215ENST00000554997 C2orf83Q53S99 150 aa7.95□□□□□ -1.14
SYNE2-215ENST00000554997 SLC25A24Q6NUK1 477 aa7.95□□□□□ -1.14
SYNE2-215ENST00000554997 NECAP1Q8NC96 275 aa7.95□□□□□ -1.14
SYNE2-215ENST00000554997 OR4X2Q8NGF9 303 aa7.95□□□□□ -1.14
SYNE2-215ENST00000554997 CHAC2Q8WUX2 184 aa7.95□□□□□ -1.14
SYNE2-215ENST00000554997 WFDC12Q8WWY7 111 aa7.95□□□□□ -1.14
SYNE2-215ENST00000554997 WDR89Q96FK6 387 aaPredicted RBP7.95□□□□□ -1.14
SYNE2-215ENST00000554997 USMG5Q96IX5 58 aa7.95□□□□□ -1.14
SYNE2-215ENST00000554997 PSENENQ9NZ42 101 aa7.95□□□□□ -1.14
SYNE2-215ENST00000554997 DMRT1Q9Y5R6 373 aa7.95□□□□□ -1.14
SYNE2-215ENST00000554997 IGLV11-55A0A075B6I3 123 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 A0A0G2JLM5 398 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 SSSCA1O60232 199 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 DEDDO75618 318 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 NDUFB8O95169 186 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 TMEM50AO95807 157 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 PRH1P02810 166 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 TRGV3P03979 118 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 RPLP1P05386 114 aaKnown RBP7.94□□□□□ -1.14
SYNE2-215ENST00000554997 GIPP09681 153 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-215ENST00000554997 CD28P10747 220 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 IAPPP10997 89 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 PVALBP20472 110 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-215ENST00000554997 CDX1P47902 265 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-215ENST00000554997 MFAP2P55001 183 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 RAP2BP61225 183 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 RPL23AP62750 156 aaKnown RBP7.94□□□□□ -1.14
SYNE2-215ENST00000554997 FGL1Q08830 312 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 C19orf35Q6ZS72 473 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 ZNF491Q8N8L2 437 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 SLC24A4Q8NFF2 622 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 MYOZ3Q8TDC0 251 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 PPP1R1CQ8WVI7 109 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 UBE2E2Q96LR5 201 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 RNF126Q9BV68 326 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 ZNF747Q9BV97 191 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 C11orf1Q9H5F2 150 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 FBXL7Q9UJT9 491 aa7.94□□□□□ -1.14
SYNE2-215ENST00000554997 RCL1Q9Y2P8 373 aaKnown RBP7.94□□□□□ -1.14
SYNE2-215ENST00000554997 LSM5Q9Y4Y9 91 aaKnown RBP7.94□□□□□ -1.14
SYNE2-215ENST00000554997 TNCP24821 2201 aa7.93□□□□□ -1.14
SYNE2-215ENST00000554997 A0A1B0GVG6 124 aa7.93□□□□□ -1.14
SYNE2-215ENST00000554997 TCRBV4S1A1TA0A5B7 111 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms