RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 PRRT1Q99946 306 aa8.12□□□□□ -1.11
SHMT2-213ENST00000554600 PDCD10Q9BUL8 212 aa8.12□□□□□ -1.11
SHMT2-213ENST00000554600 DMRT1Q9Y5R6 373 aa8.12□□□□□ -1.11
SHMT2-213ENST00000554600 F11RQ9Y624 299 aaKnown RBP8.12□□□□□ -1.11
SHMT2-213ENST00000554600 IGHV3-35A0A0C4DH35 117 aa8.11□□□□□ -1.11
SHMT2-213ENST00000554600 ANKRD20A5PA0PJZ0 165 aa8.11□□□□□ -1.11
SHMT2-213ENST00000554600 GSTZ1O43708 216 aaPredicted RBP8.11□□□□□ -1.11
SHMT2-213ENST00000554600 IFNA17P01571 189 aa8.11□□□□□ -1.11
SHMT2-213ENST00000554600 HSPE1P61604 102 aaKnown RBP8.11□□□□□ -1.11
SHMT2-213ENST00000554600 GTSCR1Q86UQ5 136 aa8.11□□□□□ -1.11
SHMT2-213ENST00000554600 SGPP2Q8IWX5 399 aa8.11□□□□□ -1.11
SHMT2-213ENST00000554600 SLC35G3Q8N808 338 aa8.11□□□□□ -1.11
SHMT2-213ENST00000554600 UBAC2Q8NBM4 344 aa8.11□□□□□ -1.11
SHMT2-213ENST00000554600 ZNF502Q8TBZ5 544 aa8.11□□□□□ -1.11
SHMT2-213ENST00000554600 VN1R17PQ8TDU5 208 aa8.11□□□□□ -1.11
SHMT2-213ENST00000554600 MISP3Q96FF7 219 aa8.11□□□□□ -1.11
SHMT2-213ENST00000554600 SOSTQ9BQB4 213 aa8.11□□□□□ -1.11
SHMT2-213ENST00000554600 THAP7Q9BT49 309 aaPredicted RBP8.11□□□□□ -1.11
SHMT2-213ENST00000554600 PLEKHA3Q9HB20 300 aa8.11□□□□□ -1.11
SHMT2-213ENST00000554600 SCP2D1Q9UJQ7 156 aa8.11□□□□□ -1.11
SHMT2-213ENST00000554600 SELENOKQ9Y6D0 94 aa8.11□□□□□ -1.11
SHMT2-213ENST00000554600 STAB2Q8WWQ8 2551 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 IZUMO1RA6ND01 250 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 OR2T8A6NH00 312 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 C2orf70A6NJV1 201 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 IGKV1-5P01602 117 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 OR5AC1P0C628 307 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 NHLRC4P0CG21 123 aaPredicted RBP8.1□□□□□ -1.11
SHMT2-213ENST00000554600 FOLR2P14207 255 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 FAUP35544 74 aaKnown RBP8.1□□□□□ -1.11
SHMT2-213ENST00000554600 MFAP2P55001 183 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 ERHP84090 104 aaKnown RBP8.1□□□□□ -1.11
SHMT2-213ENST00000554600 PRCDQ00LT1 54 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 SURF2Q15527 256 aaPredicted RBP8.1□□□□□ -1.11
SHMT2-213ENST00000554600 GUCA2BQ16661 112 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 KLK9Q2XQG4 91 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 Q56UQ5 140 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 GPHB5Q86YW7 130 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 Q8N402 240 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 OR1L6Q8NGR2 347 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 CACNG8Q8WXS5 425 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 NAA60Q9H7X0 242 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 ENY2Q9NPA8 101 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 C21orf62Q9NYP8 219 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 SIGLEC8Q9NYZ4 499 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 KLK9Q9UKQ9 250 aa8.1□□□□□ -1.11
SHMT2-213ENST00000554600 LGALS9O00182 355 aa8.09□□□□□ -1.11
SHMT2-213ENST00000554600 ST8SIA3O43173 380 aa8.09□□□□□ -1.11
SHMT2-213ENST00000554600 TGOLN2O43493 480 aa8.09□□□□□ -1.11
SHMT2-213ENST00000554600 B3GALNT1O75752 331 aa8.09□□□□□ -1.11
SHMT2-213ENST00000554600 FRMD6-AS1P0C7T7 363 aa8.09□□□□□ -1.11
SHMT2-213ENST00000554600 EDN2P20800 178 aa8.09□□□□□ -1.11
SHMT2-213ENST00000554600 UCP1P25874 307 aa8.09□□□□□ -1.11
SHMT2-213ENST00000554600 SNCAP37840 140 aa8.09□□□□□ -1.11
SHMT2-213ENST00000554600 HOXA1P49639 335 aaPredicted RBP8.09□□□□□ -1.11
SHMT2-213ENST00000554600 CD300EQ496F6 205 aaPredicted RBP8.09□□□□□ -1.11
SHMT2-213ENST00000554600 SPANXN2Q5MJ10 180 aa8.09□□□□□ -1.11
SHMT2-213ENST00000554600 OR2C3Q8N628 320 aa8.09□□□□□ -1.11
SHMT2-213ENST00000554600 OR1P1Q8NH06 330 aa8.09□□□□□ -1.11
SHMT2-213ENST00000554600 PINX1Q96BK5 328 aaKnown RBP8.09□□□□□ -1.11
SHMT2-213ENST00000554600 SCGB3A2Q96PL1 93 aa8.09□□□□□ -1.11
SHMT2-213ENST00000554600 RTBDNQ9BSG5 229 aaPredicted RBP8.09□□□□□ -1.11
SHMT2-213ENST00000554600 TMEM222Q9H0R3 208 aa8.09□□□□□ -1.11
SHMT2-213ENST00000554600 C5orf66Q9H5L9 145 aa8.09□□□□□ -1.11
SHMT2-213ENST00000554600 PALMDQ9NP74 551 aa8.09□□□□□ -1.11
SHMT2-213ENST00000554600 GPR132Q9UNW8 380 aa8.09□□□□□ -1.11
SHMT2-213ENST00000554600 KCNIP3Q9Y2W7 256 aa8.09□□□□□ -1.11
SHMT2-213ENST00000554600 A0A0B4J293 547 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 AKR1C4P17516 323 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 CBLN1P23435 193 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 ETV6P41212 452 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 AP3S2P59780 193 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 DHODHQ02127 395 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 TM4SF20Q53R12 229 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 TMEM268Q5VZI3 342 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 ADAMTSL5Q6ZMM2 481 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 CCDC190Q86UF4 302 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 TOMM5Q8N4H5 51 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 UXS1Q8NBZ7 420 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 OR2K2Q8NGT1 345 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 SCARB1Q8WTV0 552 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 GLYATL2Q8WU03 294 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 RBPMSQ93062 196 aaKnown RBP8.08□□□□□ -1.12
SHMT2-213ENST00000554600 BSCL2Q96G97 398 aaPredicted RBP8.08□□□□□ -1.12
SHMT2-213ENST00000554600 C20orf24Q9BUV8 137 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 TUBA4BQ9H853 241 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 UFC1Q9Y3C8 167 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 U3KQK5 164 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 V9GYH0 126 aa8.08□□□□□ -1.12
SHMT2-213ENST00000554600 TENM3Q9P273 2699 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 A0A0G2JRQ6 117 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 TMEM213A2RRL7 107 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 CRYM-AS1A6NIL9 109 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 A8MWP6 167 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 K7EIM0 57 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 CDS2O95674 445 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 MT-CO2P00403 227 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 IGHV3-48P01763 117 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 P0C879 139 aa8.07□□□□□ -1.12
SHMT2-213ENST00000554600 IGHV4-30-4P0DP06 118 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms