RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 RBM11P57052 281 aaKnown RBP6.92□□□□□ -1.3
TDP1-208ENST00000553989 RAB2AP61019 212 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 ZNF816Q0VGE8 651 aaPredicted RBP6.92□□□□□ -1.3
TDP1-208ENST00000553989 FOXE3Q13461 319 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 ZNF266Q14584 549 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 FAM74A3Q4VXF1 159 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 CMTM1Q8IZ96 169 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 C15orf54Q8N8G6 183 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 SUMF2Q8NBJ7 301 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 OR4A4PQ8NGN8 299 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 UBALD1Q8TB05 177 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 GLYATL2Q8WU03 294 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 MAFIPQ8WZ33 124 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 NCOR1P1Q9H4R4 102 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 FBXL17Q9UF56 701 aa6.92□□□□□ -1.3
TDP1-208ENST00000553989 ZNF256Q9Y2P7 627 aaPredicted RBP6.92□□□□□ -1.3
TDP1-208ENST00000553989 COL7A1Q02388 2944 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 OR5AC1P0C628 307 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 SLC25A6P12236 298 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 GZMHP20718 246 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 CDX1P47902 265 aaPredicted RBP6.91□□□□□ -1.3
TDP1-208ENST00000553989 RAB5BP61020 215 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 VAMP2P63027 116 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 SUMO1P63165 101 aaKnown RBP6.91□□□□□ -1.3
TDP1-208ENST00000553989 DPPA3Q6W0C5 159 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 LYZL2Q7Z4W2 148 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 IQCF2Q8IXL9 164 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 LINC00518Q8N0U6 118 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 PRR18Q8N4B5 295 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 Q8N9W7 124 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 OR11H1Q8NG94 326 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 C4orf3Q8WVX3 66 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 GNPNAT1Q96EK6 184 aaPredicted RBP6.91□□□□□ -1.3
TDP1-208ENST00000553989 S1PR3Q99500 378 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 TMEM222Q9H0R3 208 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 LINC00574Q9H8X3 128 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 Q9N2K0 584 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 SLC2A9Q9NRM0 540 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 GNG12Q9UBI6 72 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 CACFD1Q9UGQ2 172 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 LSM4Q9Y4Z0 139 aaKnown RBP6.91□□□□□ -1.3
TDP1-208ENST00000553989 TENM3Q9P273 2699 aa6.91□□□□□ -1.3
TDP1-208ENST00000553989 F8W735 103 aaPredicted RBP6.9□□□□□ -1.3
TDP1-208ENST00000553989 TXNL1O43396 289 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 NAPSAO96009 420 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 PPYP01298 95 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 PRH1P02810 166 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 MT-ND4LP03901 98 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 SFTA3P0C7M3 94 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 OR8U8P0C7N1 319 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 AADACP22760 399 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 CD1BP29016 333 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 SNCAP37840 140 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 LPAR6P43657 344 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 NKX2-1P43699 371 aaPredicted RBP6.9□□□□□ -1.3
TDP1-208ENST00000553989 CAMLGP49069 296 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 S100A12P80511 92 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 BAXQ07812 192 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 EBI3Q14213 229 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 MMDQ15546 238 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 GUK1Q16774 197 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 Q6ZRG5 221 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 OR2C3Q8N628 320 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 Q8N6K4 173 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 OR4D5Q8NGN0 318 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 OR5B12Q96R08 314 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 HSPB9Q9BQS6 159 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 HDHD3Q9BSH5 251 aaPredicted RBP6.9□□□□□ -1.3
TDP1-208ENST00000553989 HIPK2Q9H2X6 1198 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 RAB9BQ9NP90 201 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 GFOD1Q9NXC2 390 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 PRR13Q9NZ81 148 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 ZNF581Q9P0T4 197 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 TRAPPC2LQ9UL33 140 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 SMAD5-AS1Q9Y6J3 95 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 RYR3Q15413 4870 aa6.9□□□□□ -1.3
TDP1-208ENST00000553989 A0A1B0GU03 582 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 COLCA2A8K830 154 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 C1orf196B1AJZ1 125 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 SPINT2O43291 252 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 TUSC2O75896 110 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 DFFBO76075 338 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 SCGB1D2O95969 90 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 HBE1P02100 147 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 ADCYAP1P18509 176 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 GNRHRP30968 328 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 AKR1C2P52895 323 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 FXYD4P59646 89 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 SRSF3P84103 164 aaKnown RBP6.89□□□□□ -1.31
TDP1-208ENST00000553989 PAX5Q02548 391 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 AKR1C1Q04828 323 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 SP6Q3SY56 376 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 PHLDA2Q53GA4 152 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 FAM53AQ6NSI3 398 aaPredicted RBP6.89□□□□□ -1.31
TDP1-208ENST00000553989 SELENOHQ8IZQ5 122 aaKnown RBP6.89□□□□□ -1.31
TDP1-208ENST00000553989 LINC00311Q8N616 119 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 DMBX1Q8NFW5 382 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 OR10V1Q8NGI7 309 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 OR52M1Q8NGK5 317 aa6.89□□□□□ -1.31
TDP1-208ENST00000553989 OR1N2Q8NGR9 330 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms