RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 FABP5P3A8MUU1 101 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 C16orf90A8MZG2 172 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 H3BT86 120 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 KPNA4O00629 521 aaPredicted RBP1.36□□□□□ -2.19
SRP54-204ENST00000553923 UBFD1O14562 309 aaKnown RBP1.36□□□□□ -2.19
SRP54-204ENST00000553923 TP53I11O14683 189 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 DEGS1O15121 323 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 ZNF73O43830 326 aaPredicted RBP1.36□□□□□ -2.19
SRP54-204ENST00000553923 OR2T1O43869 369 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 NDUFB2O95178 105 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 CDS2O95674 445 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 IGHV3-30-3P0DP02 117 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 CCL3P10147 92 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 COX4I1P13073 169 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 RPL7P18124 248 aaKnown RBP1.36□□□□□ -2.19
SRP54-204ENST00000553923 RPS4Y1P22090 263 aaKnown RBP1.36□□□□□ -2.19
SRP54-204ENST00000553923 SRP14P37108 136 aaKnown RBP1.36□□□□□ -2.19
SRP54-204ENST00000553923 AKR1C3P42330 323 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 ZNF80P51504 273 aaPredicted RBP1.36□□□□□ -2.19
SRP54-204ENST00000553923 EIF5AP63241 154 aaKnown RBP1.36□□□□□ -2.19
SRP54-204ENST00000553923 ZNF117Q03924 483 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 AKR1C1Q04828 323 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 RPL18Q07020 188 aaKnown RBP1.36□□□□□ -2.19
SRP54-204ENST00000553923 LGALS9BQ3B8N2 356 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 FAM229BQ4G0N7 80 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 TMEM69Q5SWH9 247 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 BCL2L15Q5TBC7 163 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 FKBP1CQ5VVH2 108 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 LGALS9CQ6DKI2 356 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 TOMM20LQ6UXN7 152 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 C16orf47Q6ZP98 133 aaPredicted RBP1.36□□□□□ -2.19
SRP54-204ENST00000553923 SDIM1Q6ZPB5 146 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 Q6ZQT7 251 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 LCA10Q71F78 164 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 TRAPPC6BQ86SZ2 158 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 ANGPTL5Q86XS5 388 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 ZNF561Q8N587 486 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 C12orf45Q8N5I9 185 aaPredicted RBP1.36□□□□□ -2.19
SRP54-204ENST00000553923 OR52R1Q8NGF1 315 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 OR8D4Q8NGM9 314 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 OR13C4Q8NGS5 318 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 PPTC7Q8NI37 304 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 RNASE11Q8TAA1 199 aaKnown RBP1.36□□□□□ -2.19
SRP54-204ENST00000553923 STAG3L4Q8TBR4 150 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 CAPZA3Q96KX2 299 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 HSPB9Q9BQS6 159 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 C20orf27Q9GZN8 174 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 LRTM1Q9HBL6 345 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 AHDC1Q5TGY3 1603 aaPredicted RBP1.36□□□□□ -2.19
SRP54-204ENST00000553923 PTPRJQ12913 1337 aa1.36□□□□□ -2.19
SRP54-204ENST00000553923 CHD2O14647 1828 aaKnown RBP1.36□□□□□ -2.19
SRP54-204ENST00000553923 NUP160Q12769 1436 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 IGKV2D-24A0A075B6R9 120 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 IGKV1D-37A0A075B6S9 117 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 TRAV38-1A0A0B4J264 116 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 ODAMA1E959 279 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 ZNF860A6NHJ4 632 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 C17orf51A8MQB3 221 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 BUB1B-PAK6H3BSN5 160 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 J3KT08 172 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 TAX1BP3O14907 124 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 CREBL2O60519 120 aaPredicted RBP1.35□□□□□ -2.19
SRP54-204ENST00000553923 FAM107AO95990 144 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 PPBPP02775 128 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 BPGMP07738 259 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 TMBIM6P55061 237 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 CDC42P60953 191 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 HIST1H4AP62805 103 aaKnown RBP1.35□□□□□ -2.19
SRP54-204ENST00000553923 ZNF141Q15928 474 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 RTL8BQ17RB0 113 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 RRN3P1Q2M238 152 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 SMIM21Q3B7S5 101 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 SPANXN3Q5MJ09 141 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 HRCT1Q6UXD1 115 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 C2orf91Q6ZV80 131 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 KTN1-AS1Q86SY8 53 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 OR4D11Q8NGI4 311 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 KLF14Q8TD94 323 aaPredicted RBP1.35□□□□□ -2.19
SRP54-204ENST00000553923 THEM6Q8WUY1 208 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 ISOC1Q96CN7 298 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 PLEKHB2Q96CS7 222 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 BORCS8Q96FH0 119 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 AP1S3Q96PC3 154 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 IMMP2LQ96T52 175 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 VPS25Q9BRG1 176 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 UPK3BQ9BT76 320 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 RTL8AQ9BWD3 113 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 OR8D2Q9GZM6 311 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 SMDT1Q9H4I9 107 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 OSTCQ9NRP0 149 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 TXNL4BQ9NX01 149 aaKnown RBP1.35□□□□□ -2.19
SRP54-204ENST00000553923 RASL12Q9NYN1 266 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 COPZ2Q9P299 210 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 LAMTOR3Q9UHA4 124 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 JPT1Q9UK76 154 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 OR52A1Q9UKL2 312 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 ZNF835Q9Y2P0 537 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 LAMTOR2Q9Y2Q5 125 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 S4R3C0 116 aa1.35□□□□□ -2.19
SRP54-204ENST00000553923 HECW1Q76N89 1606 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms