RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 MGAM2Q2M2H8 2515 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 B5MCH6 92 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 OR2J3O76001 311 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 IL6RP08887 468 aaPredicted RBP6.45□□□□□ -1.38
PSEN1-209ENST00000553855 PSMB6P28072 239 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 ETV6P41212 452 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 OR2B8PP59922 312 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 SSBP2P81877 361 aaPredicted RBP6.45□□□□□ -1.38
PSEN1-209ENST00000553855 DCTN2Q13561 401 aaKnown RBP6.45□□□□□ -1.38
PSEN1-209ENST00000553855 FHL3Q13643 280 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 EXOSC2Q13868 293 aaKnown RBP6.45□□□□□ -1.38
PSEN1-209ENST00000553855 KIAA0141Q14154 515 aaPredicted RBP6.45□□□□□ -1.38
PSEN1-209ENST00000553855 RNF151Q2KHN1 245 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 RPEL1Q2QD12 228 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 BEAN1Q3B7T3 259 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 ZNF585BQ52M93 769 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 ASPHD1Q5U4P2 390 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 CCDC190Q86UF4 302 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 GDPD1Q8N9F7 314 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 OR6Q1Q8NGQ2 317 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 MRGPRFQ96AM1 343 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 EEF1AKMT3Q96AZ1 226 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 CXorf58Q96LI9 332 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 OR4C12Q96R67 309 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 SOSTQ9BQB4 213 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 KRTAP4-8Q9BYQ9 185 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 SLC2A8Q9NY64 477 aa6.45□□□□□ -1.38
PSEN1-209ENST00000553855 IGHV4OR15-8A0A075B7B6 117 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 A0A087WW49 117 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 TRAV3A0A0B4J244 114 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 TEX50A0A1B0GTY4 177 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 NAP1L6A6NFF2 107 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 C15orf61A6NNL5 157 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 TEX22C9J3V5 150 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 SAP30O75446 220 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 IFNA17P01571 189 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 PRH1P02810 166 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 CRYGCP07315 174 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 OR13C7P0DN81 318 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 AKR1C4P17516 323 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 RAP2BP61225 183 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 SRPXP78539 464 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 ERHP84090 104 aaKnown RBP6.44□□□□□ -1.38
PSEN1-209ENST00000553855 ZNF45Q02386 682 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 MRGPRG-AS1Q2M3A8 158 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 C15orf32Q32M92 178 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 SLC25A24Q6NUK1 477 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 ZNF429Q86V71 674 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 FAM219AQ8IW50 185 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 SLC35G3Q8N808 338 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 DCUN1D4Q92564 292 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 SEC22AQ96IW7 307 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 TP53RKQ96S44 253 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 SLC25A21Q9BQT8 299 aaPredicted RBP6.44□□□□□ -1.38
PSEN1-209ENST00000553855 ALX4Q9H161 411 aaPredicted RBP6.44□□□□□ -1.38
PSEN1-209ENST00000553855 NAA60Q9H7X0 242 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 PLEKHA3Q9HB20 300 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 AKIP1Q9NQ31 210 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 PEMTQ9UBM1 199 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 CACFD1Q9UGQ2 172 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 GPR132Q9UNW8 380 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 NSG2Q9Y328 171 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 V9GYH0 126 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 PKD1L1Q8TDX9 2849 aa6.44□□□□□ -1.38
PSEN1-209ENST00000553855 TRBV9A0A0B4J1U6 114 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 REG1AP05451 166 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 OR5AC1P0C628 307 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 MYOD1P15172 320 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 AREGP15514 252 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 CTRB1P17538 263 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 UCP1P25874 307 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 HOXD3P31249 432 aaPredicted RBP6.43□□□□□ -1.38
PSEN1-209ENST00000553855 SNCAP37840 140 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 SUB1P53999 127 aaKnown RBP eCLIP6.43□□□□□ -1.38
PSEN1-209ENST00000553855 SLURP1P55000 103 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 HSPE1P61604 102 aaKnown RBP6.43□□□□□ -1.38
PSEN1-209ENST00000553855 SP6Q3SY56 376 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 KPRPQ5T749 579 aaPredicted RBP6.43□□□□□ -1.38
PSEN1-209ENST00000553855 TMEM268Q5VZI3 342 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 CTRB2Q6GPI1 263 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 ZNF343Q6P1L6 599 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 TMED4Q7Z7H5 227 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 MRAPQ8TCY5 172 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 DLX4Q92988 240 aaPredicted RBP6.43□□□□□ -1.38
PSEN1-209ENST00000553855 RBPMSQ93062 196 aaKnown RBP6.43□□□□□ -1.38
PSEN1-209ENST00000553855 RTBDNQ9BSG5 229 aaPredicted RBP6.43□□□□□ -1.38
PSEN1-209ENST00000553855 TMEM222Q9H0R3 208 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 BATF3Q9NR55 127 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 NDUFA4L2Q9NRX3 87 aa6.43□□□□□ -1.38
PSEN1-209ENST00000553855 TRBV7-1A0A0A6YYK4 115 aa6.42□□□□□ -1.38
PSEN1-209ENST00000553855 IGLC7A0M8Q6 106 aa6.42□□□□□ -1.38
PSEN1-209ENST00000553855 CRYM-AS1A6NIL9 109 aa6.42□□□□□ -1.38
PSEN1-209ENST00000553855 E7EUB6 86 aa6.42□□□□□ -1.38
PSEN1-209ENST00000553855 GGCTO75223 188 aaKnown RBP6.42□□□□□ -1.38
PSEN1-209ENST00000553855 SCGB2A1O75556 95 aa6.42□□□□□ -1.38
PSEN1-209ENST00000553855 ARL3P36405 182 aa6.42□□□□□ -1.38
PSEN1-209ENST00000553855 HOXA1P49639 335 aaPredicted RBP6.42□□□□□ -1.38
PSEN1-209ENST00000553855 DEFA5Q01523 94 aa6.42□□□□□ -1.38
PSEN1-209ENST00000553855 KLF9Q13886 244 aaPredicted RBP6.42□□□□□ -1.38
PSEN1-209ENST00000553855 RBMS2Q15434 407 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms