RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 SNX10Q9Y5X0 201 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 ZNF780BQ9Y6R6 833 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 ITGB4P16144 1822 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 TNS1Q9HBL0 1735 aaKnown RBP1.4□□□□□ -2.19
VRK1-202ENST00000553683 KIF14Q15058 1648 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 MYO3AQ8NEV4 1616 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 COL22A1Q8NFW1 1626 aaPredicted RBP1.4□□□□□ -2.19
VRK1-202ENST00000553683 PIK3C2GO75747 1445 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 TPRP12270 2363 aaKnown RBP1.4□□□□□ -2.19
VRK1-202ENST00000553683 YTHDC2Q9H6S0 1430 aaKnown RBP1.4□□□□□ -2.19
VRK1-202ENST00000553683 FRYQ5TBA9 3013 aa1.4□□□□□ -2.19
VRK1-202ENST00000553683 FBN2P35556 2912 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 HELZ2Q9BYK8 2649 aaKnown RBP1.39□□□□□ -2.19
VRK1-202ENST00000553683 OTOGLQ3ZCN5 2332 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 ADGRL2O95490 1459 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 NUP153P49790 1475 aaKnown RBP1.39□□□□□ -2.19
VRK1-202ENST00000553683 MLH3Q9UHC1 1453 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 ACACBO00763 2458 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 IGHV3-72A0A0B4J1Y9 119 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 LYRM9A8MSI8 78 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 C9JAW5 83 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 E7EQ34 232 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.39□□□□□ -2.19
VRK1-202ENST00000553683 GABRPO00591 440 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 NME4O00746 187 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 PDCD5O14737 125 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 EDF1O60869 148 aaKnown RBP1.39□□□□□ -2.19
VRK1-202ENST00000553683 UPK1BO75841 260 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 CLIC3O95833 236 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 IGHG2P01859 326 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 PMP2P02689 132 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 DBIP07108 87 aaKnown RBP1.39□□□□□ -2.19
VRK1-202ENST00000553683 IL3P08700 152 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 SCTP09683 121 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 OR4A8P0C604 315 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 OR5AL1P0C617 328 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 CT45A6P0DMU7 189 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 CT45A5P0DMU8 189 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 CT45A7P0DMV0 189 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 GZMBP10144 247 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 ERGP11308 486 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 HLA-EP13747 358 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 SPNP16150 400 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 MYL12AP19105 171 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 GGT1P19440 569 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 CRHBPP24387 322 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 S100A2P29034 98 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 GABRA3P34903 492 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 G6PCP35575 357 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 GALR1P47211 349 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 TMBIM6P55061 237 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 AQP4P55087 323 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 GFERP55789 205 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 RAB38P57729 211 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 OR12D2P58182 307 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 PPP1CBP62140 327 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 RPS11P62280 158 aaKnown RBP eCLIP1.39□□□□□ -2.19
VRK1-202ENST00000553683 RPS25P62851 125 aaKnown RBP1.39□□□□□ -2.19
VRK1-202ENST00000553683 SP4Q02446 784 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 GNA12Q03113 381 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 HSD52Q0P140 79 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 PDGFRLQ15198 375 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 RHEBQ15382 184 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 ZNF726P1Q15940 193 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 CT45A1Q5HYN5 189 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 Q5XG85 94 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 TNFAIP8L2Q6P589 184 aaPredicted RBP1.39□□□□□ -2.19
VRK1-202ENST00000553683 GLIPR1L1Q6UWM5 242 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 C16orf47Q6ZP98 133 aaPredicted RBP1.39□□□□□ -2.19
VRK1-202ENST00000553683 FOXI2Q6ZQN5 318 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 RASSF6Q6ZTQ3 369 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 ARPINQ7Z6K5 226 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 CMC1Q7Z7K0 106 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 ZCCHC24Q8N2G6 241 aaKnown RBP1.39□□□□□ -2.19
VRK1-202ENST00000553683 EXOC3-AS1Q8N2X6 119 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 SLC25A45Q8N413 288 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 NPWQ8N729 165 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 COX18Q8N8Q8 333 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 FER1L6-AS1Q8NA97 138 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 C5orf17Q8NAS9 161 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 OR4K17Q8NGC6 315 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 OR11H6Q8NGC7 330 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 OR10AD1Q8NGE0 317 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 OR52E2Q8NGJ4 325 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 OR8D4Q8NGM9 314 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 OR10D4PQ8NGN7 298 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 OR2T4Q8NH00 348 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 OR10G6Q8NH81 332 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 CT45A3Q8NHU0 189 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 ZNF675Q8TD23 568 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 ZMYND19Q96E35 227 aaPredicted RBP1.39□□□□□ -2.19
VRK1-202ENST00000553683 CARD19Q96LW7 228 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 SCGB3A2Q96PL1 93 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 TSPAN32Q96QS1 320 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 TM2D3Q9BRN9 247 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 ADAT1Q9BUB4 502 aaKnown RBP1.39□□□□□ -2.19
VRK1-202ENST00000553683 ZNF436Q9C0F3 470 aaPredicted RBP1.39□□□□□ -2.19
VRK1-202ENST00000553683 TMEM222Q9H0R3 208 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 OR51I2Q9H344 312 aa1.39□□□□□ -2.19
VRK1-202ENST00000553683 TUBA4BQ9H853 241 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms