RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 TATDN3Q17R31 274 aa11.52□□□□□ -0.57
MTHFD1-204ENST00000553405 CXorf66Q5JRM2 361 aaPredicted RBP11.52□□□□□ -0.57
MTHFD1-204ENST00000553405 OR4D5Q8NGN0 318 aa11.52□□□□□ -0.57
MTHFD1-204ENST00000553405 TMEM170AQ8WVE7 144 aa11.52□□□□□ -0.57
MTHFD1-204ENST00000553405 HINT2Q9BX68 163 aa11.52□□□□□ -0.57
MTHFD1-204ENST00000553405 TCRBV4S1A1TA0A5B7 111 aa11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 FAM90A26D6RGX4 464 aa11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 CCSO14618 274 aa11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 DHFRP00374 187 aa11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 PF4V1P10720 104 aa11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 CDX1P47902 265 aaPredicted RBP11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 DEFA5Q01523 94 aa11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 ID3Q02535 119 aa11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 NDUFA11Q86Y39 141 aa11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 UBE2E2Q96LR5 201 aa11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 MS4A10Q96PG2 267 aa11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 P2RX4Q99571 388 aa11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 SLA2Q9H6Q3 261 aa11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 GNB4Q9HAV0 340 aa11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 GPN1Q9HCN4 374 aaPredicted RBP11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 ZFP57Q9NU63 452 aa11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 TSSC4Q9Y5U2 329 aaPredicted RBP11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 F11RQ9Y624 299 aaKnown RBP11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 ALG5Q9Y673 324 aa11.51□□□□□ -0.57
MTHFD1-204ENST00000553405 I3L521 148 aa11.5□□□□□ -0.57
MTHFD1-204ENST00000553405 IFNA17P01571 189 aa11.5□□□□□ -0.57
MTHFD1-204ENST00000553405 RNASE2P10153 161 aaKnown RBP11.5□□□□□ -0.57
MTHFD1-204ENST00000553405 RUNX1Q01196 453 aa11.5□□□□□ -0.57
MTHFD1-204ENST00000553405 ZBTB8BQ8NAP8 495 aaPredicted RBP11.5□□□□□ -0.57
MTHFD1-204ENST00000553405 RBKSQ9H477 322 aa11.5□□□□□ -0.57
MTHFD1-204ENST00000553405 PLEKHA3Q9HB20 300 aa11.5□□□□□ -0.57
MTHFD1-204ENST00000553405 NXPH3O95157 252 aa11.49□□□□□ -0.57
MTHFD1-204ENST00000553405 NDUFB8O95169 186 aa11.49□□□□□ -0.57
MTHFD1-204ENST00000553405 TRGV3P03979 118 aa11.49□□□□□ -0.57
MTHFD1-204ENST00000553405 TPPP2P59282 170 aa11.49□□□□□ -0.57
MTHFD1-204ENST00000553405 RHOGP84095 191 aa11.49□□□□□ -0.57
MTHFD1-204ENST00000553405 IAH1Q2TAA2 248 aaPredicted RBP11.49□□□□□ -0.57
MTHFD1-204ENST00000553405 ETV3LQ6ZN32 361 aa11.49□□□□□ -0.57
MTHFD1-204ENST00000553405 NECAP1Q8NC96 275 aa11.49□□□□□ -0.57
MTHFD1-204ENST00000553405 OR1P1Q8NH06 330 aa11.49□□□□□ -0.57
MTHFD1-204ENST00000553405 OR1S1Q8NH92 325 aa11.49□□□□□ -0.57
MTHFD1-204ENST00000553405 CACFD1Q9UGQ2 172 aa11.49□□□□□ -0.57
MTHFD1-204ENST00000553405 FAM223BA6NKX1 122 aa11.48□□□□□ -0.57
MTHFD1-204ENST00000553405 OR2J3O76001 311 aa11.48□□□□□ -0.57
MTHFD1-204ENST00000553405 TMEM50AO95807 157 aa11.48□□□□□ -0.57
MTHFD1-204ENST00000553405 IFNA21P01568 189 aa11.48□□□□□ -0.57
MTHFD1-204ENST00000553405 H2BFSP57053 126 aa11.48□□□□□ -0.57
MTHFD1-204ENST00000553405 TMEM65Q6PI78 240 aa11.48□□□□□ -0.57
MTHFD1-204ENST00000553405 FAM223AQ8IWN6 122 aa11.48□□□□□ -0.57
MTHFD1-204ENST00000553405 UXS1Q8NBZ7 420 aa11.48□□□□□ -0.57
MTHFD1-204ENST00000553405 C11orf1Q9H5F2 150 aa11.48□□□□□ -0.57
MTHFD1-204ENST00000553405 MGAM2Q2M2H8 2515 aa11.48□□□□□ -0.57
MTHFD1-204ENST00000553405 K7EIM0 57 aa11.47□□□□□ -0.57
MTHFD1-204ENST00000553405 HOXA1P49639 335 aaPredicted RBP11.47□□□□□ -0.57
MTHFD1-204ENST00000553405 FHL3Q13643 280 aa11.47□□□□□ -0.57
MTHFD1-204ENST00000553405 NSUN5P1Q3KNT7 163 aa11.47□□□□□ -0.57
MTHFD1-204ENST00000553405 ZNF343Q6P1L6 599 aa11.47□□□□□ -0.57
MTHFD1-204ENST00000553405 DTD1Q8TEA8 209 aa11.47□□□□□ -0.57
MTHFD1-204ENST00000553405 C4orf3Q8WVX3 66 aa11.47□□□□□ -0.57
MTHFD1-204ENST00000553405 WDR89Q96FK6 387 aaPredicted RBP11.47□□□□□ -0.57
MTHFD1-204ENST00000553405 USMG5Q96IX5 58 aa11.47□□□□□ -0.57
MTHFD1-204ENST00000553405 C2orf50Q96LR7 162 aa11.47□□□□□ -0.57
MTHFD1-204ENST00000553405 PDCD10Q9BUL8 212 aa11.47□□□□□ -0.57
MTHFD1-204ENST00000553405 RCL1Q9Y2P8 373 aaKnown RBP11.47□□□□□ -0.57
MTHFD1-204ENST00000553405 A0A1W2PRX2 142 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 MFSD2BA6NFX1 497 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 CEBPZOSA8MTT3 80 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 F8W735 103 aaPredicted RBP11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 I3L2K1 104 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 SYNGR2O43760 224 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 SIX6O95475 246 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 TSPAN15O95858 294 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 IGHV3-11P01762 117 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 MBPP02686 304 aaPredicted RBP11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 LGALS1P09382 135 aaKnown RBP11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 HIST1H1BP16401 226 aaKnown RBP11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 PAX9P55771 341 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 POLR2GP62487 172 aaKnown RBP eCLIP11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 ERHP84090 104 aaKnown RBP11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 DEFB136Q30KP8 78 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 C15orf32Q32M92 178 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 C8orf86Q6ZUL3 223 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 ZNF414Q96IQ9 312 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 RAX2Q96IS3 184 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 CCDC140Q96MF4 163 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 MAGT1Q9H0U3 335 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 ZNF355PQ9NSJ1 428 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 FBXL7Q9UJT9 491 aa11.46□□□□□ -0.57
MTHFD1-204ENST00000553405 GOSR2O14653 212 aa11.45□□□□□ -0.58
MTHFD1-204ENST00000553405 TRBV12-3P01733 135 aa11.45□□□□□ -0.58
MTHFD1-204ENST00000553405 CXCL3P19876 107 aa11.45□□□□□ -0.58
MTHFD1-204ENST00000553405 NKX2-1P43699 371 aaPredicted RBP11.45□□□□□ -0.58
MTHFD1-204ENST00000553405 C2orf83Q53S99 150 aa11.45□□□□□ -0.58
MTHFD1-204ENST00000553405 KHDC1LQ5JSQ8 128 aa11.45□□□□□ -0.58
MTHFD1-204ENST00000553405 MRPL41Q8IXM3 137 aaKnown RBP11.45□□□□□ -0.58
MTHFD1-204ENST00000553405 KLHL30-AS1Q8NEE0 82 aa11.45□□□□□ -0.58
MTHFD1-204ENST00000553405 OR1L6Q8NGR2 347 aa11.45□□□□□ -0.58
MTHFD1-204ENST00000553405 HEYLQ9NQ87 328 aaPredicted RBP11.45□□□□□ -0.58
MTHFD1-204ENST00000553405 NBEAL1Q6ZS30 2694 aa11.44□□□□□ -0.58
MTHFD1-204ENST00000553405 A0A0G2JLM5 398 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms