RNA–Protein interactions for RNA: ENST00000553335.5

TMEM260-204, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 560 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-204ENST00000553335 SRSF2Q01130 221 aaKnown RBP7.66□□□□□ -1.18
TMEM260-204ENST00000553335 FOXL1Q12952 345 aa7.66□□□□□ -1.18
TMEM260-204ENST00000553335 CXorf66Q5JRM2 361 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-204ENST00000553335 CENPVQ7Z7K6 275 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-204ENST00000553335 OR11H7Q8NGC8 314 aa7.66□□□□□ -1.18
TMEM260-204ENST00000553335 LINC01006Q8NI28 216 aa7.66□□□□□ -1.18
TMEM260-204ENST00000553335 DTD1Q8TEA8 209 aa7.66□□□□□ -1.18
TMEM260-204ENST00000553335 CIB3Q96Q77 187 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-204ENST00000553335 ZNF436Q9C0F3 470 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-204ENST00000553335 RBKSQ9H477 322 aa7.66□□□□□ -1.18
TMEM260-204ENST00000553335 HEYLQ9NQ87 328 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-204ENST00000553335 LINC00527Q9UJ94 153 aa7.66□□□□□ -1.18
TMEM260-204ENST00000553335 FBXO7Q9Y3I1 522 aa7.66□□□□□ -1.18
TMEM260-204ENST00000553335 WSB1Q9Y6I7 421 aa7.66□□□□□ -1.18
TMEM260-204ENST00000553335 U3KQE9 123 aa7.66□□□□□ -1.18
TMEM260-204ENST00000553335 PLXNB1O43157 2135 aa7.66□□□□□ -1.18
TMEM260-204ENST00000553335 CLPSL1A2RUU4 121 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 PSMB11A5LHX3 300 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 CGB1A6NKQ9 187 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 CYB5BO43169 146 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 IGLV1-40P01703 118 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 GIPP09681 153 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-204ENST00000553335 APELAP0DMC3 54 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 OR13C7P0DN81 318 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 EGR2P11161 476 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-204ENST00000553335 PVALBP20472 110 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-204ENST00000553335 PSMB6P28072 239 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 SNCAP37840 140 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 SUB1P53999 127 aaKnown RBP eCLIP7.65□□□□□ -1.18
TMEM260-204ENST00000553335 H2BFSP57053 126 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 POLR2GP62487 172 aaKnown RBP eCLIP7.65□□□□□ -1.18
TMEM260-204ENST00000553335 RPP30P78346 268 aaKnown RBP7.65□□□□□ -1.18
TMEM260-204ENST00000553335 SRSF4Q08170 494 aaKnown RBP7.65□□□□□ -1.18
TMEM260-204ENST00000553335 TMEM95Q3KNT9 176 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 SPINK9Q5DT21 86 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 TTC9CQ8N5M4 171 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-204ENST00000553335 OR10W1Q8NGF6 305 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 OR1L6Q8NGR2 347 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 FAM110DQ8TAY7 271 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-204ENST00000553335 NOL4LQ96MY1 436 aaPredicted RBP7.65□□□□□ -1.18
TMEM260-204ENST00000553335 MAGT1Q9H0U3 335 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 SERTAD4Q9NUC0 356 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 LSM5Q9Y4Y9 91 aaKnown RBP7.65□□□□□ -1.18
TMEM260-204ENST00000553335 RNF114Q9Y508 228 aa7.65□□□□□ -1.18
TMEM260-204ENST00000553335 TNCP24821 2201 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 A0A1B0GW64 132 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 IGLC7A0M8Q6 106 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 NPIPB5A8MRT5 1133 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 G3V318 75 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 H3BUA1 57 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 K7EPK0 472 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 L7N2F9 121 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 MBPP02686 304 aaPredicted RBP7.64□□□□□ -1.19
TMEM260-204ENST00000553335 CRYGCP07315 174 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 H2AFB1P0C5Y9 115 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 PET100P0DJ07 73 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 DEFA4P12838 97 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 CTRB1P17538 263 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 HTR2BP41595 481 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 BCAP31P51572 246 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 S100A10P60903 97 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 RAP2BP61225 183 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 RPL23AP62750 156 aaKnown RBP7.64□□□□□ -1.19
TMEM260-204ENST00000553335 VAMP2P63027 116 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 WT1-ASQ06250 92 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 FGL1Q08830 312 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 IL15RAQ13261 267 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 RAB32Q13637 225 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 ASPHD1Q5U4P2 390 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 CTRB2Q6GPI1 263 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 NOXA1Q86UR1 476 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 OR2C3Q8N628 320 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 COMMD1Q8N668 190 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 OR5T1Q8NG75 326 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 TAF15Q92804 592 aaKnown RBP eCLIP7.64□□□□□ -1.19
TMEM260-204ENST00000553335 RAB40CQ96S21 281 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 ZNF355PQ9NSJ1 428 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 RCL1Q9Y2P8 373 aaKnown RBP7.64□□□□□ -1.19
TMEM260-204ENST00000553335 U3KQ87 197 aa7.64□□□□□ -1.19
TMEM260-204ENST00000553335 TMEM89A2RUT3 159 aa7.63□□□□□ -1.19
TMEM260-204ENST00000553335 H3BS24 57 aa7.63□□□□□ -1.19
TMEM260-204ENST00000553335 SSSCA1O60232 199 aa7.63□□□□□ -1.19
TMEM260-204ENST00000553335 IFNA10P01566 189 aa7.63□□□□□ -1.19
TMEM260-204ENST00000553335 REG1AP05451 166 aa7.63□□□□□ -1.19
TMEM260-204ENST00000553335 IAPPP10997 89 aa7.63□□□□□ -1.19
TMEM260-204ENST00000553335 AREGP15514 252 aa7.63□□□□□ -1.19
TMEM260-204ENST00000553335 HIST1H1BP16401 226 aaKnown RBP7.63□□□□□ -1.19
TMEM260-204ENST00000553335 MDKP21741 143 aaPredicted RBP7.63□□□□□ -1.19
TMEM260-204ENST00000553335 PPIFP30405 207 aaKnown RBP7.63□□□□□ -1.19
TMEM260-204ENST00000553335 ATP5IP56385 69 aaPredicted RBP7.63□□□□□ -1.19
TMEM260-204ENST00000553335 RAB11AP62491 216 aa7.63□□□□□ -1.19
TMEM260-204ENST00000553335 LRRC37A5PQ49AS3 106 aa7.63□□□□□ -1.19
TMEM260-204ENST00000553335 C19orf54Q5BKX5 351 aa7.63□□□□□ -1.19
TMEM260-204ENST00000553335 TEX38Q6PEX7 206 aa7.63□□□□□ -1.19
TMEM260-204ENST00000553335 TMEM65Q6PI78 240 aa7.63□□□□□ -1.19
TMEM260-204ENST00000553335 KLHDC1Q8N7A1 406 aa7.63□□□□□ -1.19
TMEM260-204ENST00000553335 ZNF114Q8NC26 417 aa7.63□□□□□ -1.19
TMEM260-204ENST00000553335 SLC24A4Q8NFF2 622 aa7.63□□□□□ -1.19
TMEM260-204ENST00000553335 PPP1R1CQ8WVI7 109 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms