RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 BTNL8Q6UX41 500 aa5.03□□□□□ -1.6
SCAF11-211ENST00000547950 RBPMS2Q6ZRY4 209 aaKnown RBP5.03□□□□□ -1.6
SCAF11-211ENST00000547950 GDPD1Q8N9F7 314 aa5.03□□□□□ -1.6
SCAF11-211ENST00000547950 UBAC2Q8NBM4 344 aa5.03□□□□□ -1.6
SCAF11-211ENST00000547950 ZNF502Q8TBZ5 544 aa5.03□□□□□ -1.6
SCAF11-211ENST00000547950 VN1R17PQ8TDU5 208 aa5.03□□□□□ -1.6
SCAF11-211ENST00000547950 SLC25A46Q96AG3 418 aa5.03□□□□□ -1.6
SCAF11-211ENST00000547950 SRSF8Q9BRL6 282 aaKnown RBP5.03□□□□□ -1.6
SCAF11-211ENST00000547950 FUNDC2Q9BWH2 189 aa5.03□□□□□ -1.6
SCAF11-211ENST00000547950 NDUFA4L2Q9NRX3 87 aa5.03□□□□□ -1.6
SCAF11-211ENST00000547950 COMMD9Q9P000 198 aa5.03□□□□□ -1.6
SCAF11-211ENST00000547950 KLK9Q9UKQ9 250 aa5.03□□□□□ -1.6
SCAF11-211ENST00000547950 UFC1Q9Y3C8 167 aa5.03□□□□□ -1.6
SCAF11-211ENST00000547950 TENM2Q9NT68 2774 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 LCE6AA0A183 80 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 A8MWP6 167 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 FAM25AB3EWG3 89 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 FAM25CB3EWG5 89 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 FAM25GB3EWG6 89 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 TGOLN2O43493 480 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 ZNF207O43670 478 aaKnown RBP5.02□□□□□ -1.61
SCAF11-211ENST00000547950 HPGDSO60760 199 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 ELK1P19419 428 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 S100GP29377 79 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 MFAP2P55001 183 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 ANKRD55Q3KP44 614 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 Q56UQ5 140 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 RNASE12Q5GAN4 147 aaKnown RBP5.02□□□□□ -1.61
SCAF11-211ENST00000547950 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 THOC7Q6I9Y2 204 aaKnown RBP5.02□□□□□ -1.61
SCAF11-211ENST00000547950 LPCAT3Q6P1A2 487 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 HSD17B13Q7Z5P4 300 aaPredicted RBP5.02□□□□□ -1.61
SCAF11-211ENST00000547950 TBC1D26Q86UD7 250 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 OR1L6Q8NGR2 347 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 GPX8Q8TED1 209 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 SCARB1Q8WTV0 552 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 LSM10Q969L4 123 aaKnown RBP5.02□□□□□ -1.61
SCAF11-211ENST00000547950 MARC2Q969Z3 335 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 TMEM56Q96MV1 263 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 C20orf24Q9BUV8 137 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 FXYD6Q9H0Q3 95 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 C21orf62Q9NYP8 219 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 MRPL27Q9P0M9 148 aaKnown RBP5.02□□□□□ -1.61
SCAF11-211ENST00000547950 PRNDQ9UKY0 176 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 ANAPC10Q9UM13 185 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 F11RQ9Y624 299 aaKnown RBP5.02□□□□□ -1.61
SCAF11-211ENST00000547950 SORL1Q92673 2214 aa5.02□□□□□ -1.61
SCAF11-211ENST00000547950 HUWE1Q7Z6Z7 4374 aaKnown RBP5.02□□□□□ -1.61
SCAF11-211ENST00000547950 LOC102724200A0A096LPH7 203 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-211ENST00000547950 TRAV25A0A0B4J276 109 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 H3BS24 57 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 M0QYG6 137 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 YIF1AO95070 293 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 APOA1P02647 267 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 FGF2P09038 288 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 C8orf88P0DMB2 117 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 RORCP51449 518 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 ELLP55199 621 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-211ENST00000547950 H2BFWTQ7Z2G1 175 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 SLC38A6Q8IZM9 456 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 OR2C3Q8N628 320 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 OR4A16Q8NH70 328 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 BSCL2Q96G97 398 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-211ENST00000547950 CMTM3Q96MX0 182 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 CHRDL1Q9BU40 450 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 GGTLC1Q9BX51 225 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 ZNF436Q9C0F3 470 aaPredicted RBP5.01□□□□□ -1.61
SCAF11-211ENST00000547950 C5orf66Q9H5L9 145 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 SCPEP1Q9HB40 452 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 FKBP11Q9NYL4 201 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 UBQLN2Q9UHD9 624 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 RYR3Q15413 4870 aa5.01□□□□□ -1.61
SCAF11-211ENST00000547950 IGHV3-49A0A0A0MS15 119 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 K7EIM0 57 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 NDUFA4O00483 81 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 IGKV1-39P01597 117 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 IGHV3-48P01763 117 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 IGKV1D-39P04432 117 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 CTSGP08311 255 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 PGAM2P15259 253 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 PI3P19957 117 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 RCVRNP35243 200 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 IZUMO4Q1ZYL8 232 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 LAMTOR1Q6IAA8 161 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 MZT2AQ6P582 158 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 SPSB3Q6PJ21 355 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 OR5B3Q8NH48 314 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 IL17DQ8TAD2 202 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 TMEM190Q8WZ59 177 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 MRGPRFQ96AM1 343 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 PINX1Q96BK5 328 aaKnown RBP5□□□□□ -1.61
SCAF11-211ENST00000547950 TSC22D3Q99576 134 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 DAZ1Q9NQZ3 744 aaKnown RBP5□□□□□ -1.61
SCAF11-211ENST00000547950 TMEM14BQ9NUH8 114 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 KLK11Q9UBX7 282 aa5□□□□□ -1.61
SCAF11-211ENST00000547950 IGKV3-7A0A075B6H7 116 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 C15orf61A6NNL5 157 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 K7EMT4 169 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 TSPAN4O14817 238 aa4.99□□□□□ -1.61
SCAF11-211ENST00000547950 NUPL2O15504 423 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms