RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 FAM240BA0A1B0GVZ2 78 aa12.99□□□□□ -0.33
CCDC38-203ENST00000546803 INS-IGF2F8WCM5 200 aa12.99□□□□□ -0.33
CCDC38-203ENST00000546803 LINC01619G3V211 115 aa12.99□□□□□ -0.33
CCDC38-203ENST00000546803 DUS4LO95620 317 aaKnown RBP12.99□□□□□ -0.33
CCDC38-203ENST00000546803 TCRBP04435 133 aa12.99□□□□□ -0.33
CCDC38-203ENST00000546803 SULT1A3P0DMM9 295 aa12.99□□□□□ -0.33
CCDC38-203ENST00000546803 SULT1A4P0DMN0 295 aa12.99□□□□□ -0.33
CCDC38-203ENST00000546803 ERHP84090 104 aaKnown RBP12.99□□□□□ -0.33
CCDC38-203ENST00000546803 C15orf32Q32M92 178 aa12.99□□□□□ -0.33
CCDC38-203ENST00000546803 ANKRD55Q3KP44 614 aa12.99□□□□□ -0.33
CCDC38-203ENST00000546803 NMSQ5H8A3 153 aa12.99□□□□□ -0.33
CCDC38-203ENST00000546803 LYZL2Q7Z4W2 148 aa12.99□□□□□ -0.33
CCDC38-203ENST00000546803 OR2C3Q8N628 320 aa12.99□□□□□ -0.33
CCDC38-203ENST00000546803 C20orf85Q9H1P6 137 aa12.99□□□□□ -0.33
CCDC38-203ENST00000546803 CACNG5Q9UF02 275 aa12.99□□□□□ -0.33
CCDC38-203ENST00000546803 F11RQ9Y624 299 aaKnown RBP12.99□□□□□ -0.33
CCDC38-203ENST00000546803 C9orf170A2RU37 121 aa12.98□□□□□ -0.33
CCDC38-203ENST00000546803 HLA-AP01891 365 aaKnown RBP12.98□□□□□ -0.33
CCDC38-203ENST00000546803 OR4E1P0C645 316 aa12.98□□□□□ -0.33
CCDC38-203ENST00000546803 ANXA7P20073 488 aaKnown RBP12.98□□□□□ -0.33
CCDC38-203ENST00000546803 SPCS3P61009 180 aa12.98□□□□□ -0.33
CCDC38-203ENST00000546803 DHRS2Q13268 280 aa12.98□□□□□ -0.33
CCDC38-203ENST00000546803 EXOSC2Q13868 293 aaKnown RBP12.98□□□□□ -0.33
CCDC38-203ENST00000546803 C19orf35Q6ZS72 473 aa12.98□□□□□ -0.33
CCDC38-203ENST00000546803 LYG2Q86SG7 212 aa12.98□□□□□ -0.33
CCDC38-203ENST00000546803 RCC1LQ96I51 464 aaKnown RBP12.98□□□□□ -0.33
CCDC38-203ENST00000546803 MCRIP2Q9BUT9 160 aaKnown RBP12.98□□□□□ -0.33
CCDC38-203ENST00000546803 PEF1Q9UBV8 284 aaKnown RBP12.98□□□□□ -0.33
CCDC38-203ENST00000546803 TMED3Q9Y3Q3 217 aa12.98□□□□□ -0.33
CCDC38-203ENST00000546803 IGHV4OR15-8A0A075B7B6 117 aa12.97□□□□□ -0.33
CCDC38-203ENST00000546803 A0A087WW49 117 aa12.97□□□□□ -0.33
CCDC38-203ENST00000546803 A0A1B0GU03 582 aa12.97□□□□□ -0.33
CCDC38-203ENST00000546803 NDUFB8O95169 186 aa12.97□□□□□ -0.33
CCDC38-203ENST00000546803 ZP3P21754 424 aa12.97□□□□□ -0.33
CCDC38-203ENST00000546803 DEFA5Q01523 94 aa12.97□□□□□ -0.33
CCDC38-203ENST00000546803 SMCO1Q147U7 214 aa12.97□□□□□ -0.33
CCDC38-203ENST00000546803 C4orf46Q504U0 113 aa12.97□□□□□ -0.33
CCDC38-203ENST00000546803 PDLIM3Q53GG5 364 aaPredicted RBP12.97□□□□□ -0.33
CCDC38-203ENST00000546803 SLC25A24Q6NUK1 477 aa12.97□□□□□ -0.33
CCDC38-203ENST00000546803 ZNF114Q8NC26 417 aa12.97□□□□□ -0.33
CCDC38-203ENST00000546803 OR1P1Q8NH06 330 aa12.97□□□□□ -0.33
CCDC38-203ENST00000546803 COQ8AQ8NI60 647 aa12.97□□□□□ -0.33
CCDC38-203ENST00000546803 CXorf58Q96LI9 332 aa12.97□□□□□ -0.33
CCDC38-203ENST00000546803 ENY2Q9NPA8 101 aa12.97□□□□□ -0.33
CCDC38-203ENST00000546803 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.96□□□□□ -0.33
CCDC38-203ENST00000546803 SLC25A6P12236 298 aa12.96□□□□□ -0.33
CCDC38-203ENST00000546803 HOXA1P49639 335 aaPredicted RBP12.96□□□□□ -0.33
CCDC38-203ENST00000546803 DEFA1P59665 94 aa12.96□□□□□ -0.33
CCDC38-203ENST00000546803 DEFA3P59666 94 aa12.96□□□□□ -0.33
CCDC38-203ENST00000546803 IFITM3Q01628 133 aa12.96□□□□□ -0.33
CCDC38-203ENST00000546803 EEF1AKMT3Q96AZ1 226 aa12.96□□□□□ -0.33
CCDC38-203ENST00000546803 GPR61Q9BZJ8 451 aa12.96□□□□□ -0.33
CCDC38-203ENST00000546803 NUDT15Q9NV35 164 aa12.96□□□□□ -0.33
CCDC38-203ENST00000546803 DMRT1Q9Y5R6 373 aa12.96□□□□□ -0.33
CCDC38-203ENST00000546803 TRBV7-1A0A0A6YYK4 115 aa12.95□□□□□ -0.34
CCDC38-203ENST00000546803 ANKRD34BA5PLL1 514 aa12.95□□□□□ -0.34
CCDC38-203ENST00000546803 H2AFB2P0C5Z0 115 aa12.95□□□□□ -0.34
CCDC38-203ENST00000546803 SNCAP37840 140 aa12.95□□□□□ -0.34
CCDC38-203ENST00000546803 SUB1P53999 127 aaKnown RBP eCLIP12.95□□□□□ -0.34
CCDC38-203ENST00000546803 SPINK9Q5DT21 86 aa12.95□□□□□ -0.34
CCDC38-203ENST00000546803 SAMD5Q5TGI4 173 aa12.95□□□□□ -0.34
CCDC38-203ENST00000546803 ENKURQ8TC29 256 aa12.95□□□□□ -0.34
CCDC38-203ENST00000546803 VN1R17PQ8TDU5 208 aa12.95□□□□□ -0.34
CCDC38-203ENST00000546803 TRAV6A0A075B6T7 132 aa12.94□□□□□ -0.34
CCDC38-203ENST00000546803 IGLL1P15814 213 aa12.94□□□□□ -0.34
CCDC38-203ENST00000546803 HOXD3P31249 432 aaPredicted RBP12.94□□□□□ -0.34
CCDC38-203ENST00000546803 MFAP2P55001 183 aa12.94□□□□□ -0.34
CCDC38-203ENST00000546803 WNK1Q9H4A3 2382 aa12.94□□□□□ -0.34
CCDC38-203ENST00000546803 CEBPZOSA8MTT3 80 aa12.93□□□□□ -0.34
CCDC38-203ENST00000546803 OVOL1O14753 267 aa12.93□□□□□ -0.34
CCDC38-203ENST00000546803 HOXB5P09067 269 aa12.93□□□□□ -0.34
CCDC38-203ENST00000546803 SLURP1P55000 103 aa12.93□□□□□ -0.34
CCDC38-203ENST00000546803 TNFRSF9Q07011 255 aa12.93□□□□□ -0.34
CCDC38-203ENST00000546803 OXLD1Q5BKU9 147 aa12.93□□□□□ -0.34
CCDC38-203ENST00000546803 GGNBP1Q5YKI7 109 aa12.93□□□□□ -0.34
CCDC38-203ENST00000546803 DUSP18Q8NEJ0 188 aa12.93□□□□□ -0.34
CCDC38-203ENST00000546803 OR1S1Q8NH92 325 aa12.93□□□□□ -0.34
CCDC38-203ENST00000546803 MITD1Q8WV92 249 aa12.93□□□□□ -0.34
CCDC38-203ENST00000546803 DCUN1D4Q92564 292 aa12.93□□□□□ -0.34
CCDC38-203ENST00000546803 DLX4Q92988 240 aaPredicted RBP12.93□□□□□ -0.34
CCDC38-203ENST00000546803 HSPB7Q9UBY9 170 aa12.93□□□□□ -0.34
CCDC38-203ENST00000546803 MFSD2BA6NFX1 497 aa12.92□□□□□ -0.34
CCDC38-203ENST00000546803 G3V4G9 280 aa12.92□□□□□ -0.34
CCDC38-203ENST00000546803 PITX3O75364 302 aa12.92□□□□□ -0.34
CCDC38-203ENST00000546803 IFNA21P01568 189 aa12.92□□□□□ -0.34
CCDC38-203ENST00000546803 TRBV12-3P01733 135 aa12.92□□□□□ -0.34
CCDC38-203ENST00000546803 TATDN3Q17R31 274 aa12.92□□□□□ -0.34
CCDC38-203ENST00000546803 RPEL1Q2QD12 228 aa12.92□□□□□ -0.34
CCDC38-203ENST00000546803 PVRIGQ6DKI7 326 aa12.92□□□□□ -0.34
CCDC38-203ENST00000546803 ZNF502Q8TBZ5 544 aa12.92□□□□□ -0.34
CCDC38-203ENST00000546803 CCDC140Q96MF4 163 aa12.92□□□□□ -0.34
CCDC38-203ENST00000546803 ATP6V0BQ99437 205 aa12.92□□□□□ -0.34
CCDC38-203ENST00000546803 HIPK2Q9H2X6 1198 aa12.92□□□□□ -0.34
CCDC38-203ENST00000546803 HEYLQ9NQ87 328 aaPredicted RBP12.92□□□□□ -0.34
CCDC38-203ENST00000546803 FAM90A26D6RGX4 464 aa12.91□□□□□ -0.34
CCDC38-203ENST00000546803 K7EIM0 57 aa12.91□□□□□ -0.34
CCDC38-203ENST00000546803 CORTO00230 105 aa12.91□□□□□ -0.34
CCDC38-203ENST00000546803 BMPR1BO00238 502 aa12.91□□□□□ -0.34
CCDC38-203ENST00000546803 GGCTO75223 188 aaKnown RBP12.91□□□□□ -0.34
CCDC38-203ENST00000546803 RNASE2P10153 161 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms