RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 CKLFQ9UBR5 152 aa2.21□□□□□ -2.06
LEMD3-204ENST00000542032 ERG28Q9UKR5 140 aa2.21□□□□□ -2.06
LEMD3-204ENST00000542032 RIMS1Q86UR5 1692 aaKnown RBP2.21□□□□□ -2.06
LEMD3-204ENST00000542032 IBTKQ9P2D0 1353 aaPredicted RBP2.21□□□□□ -2.06
LEMD3-204ENST00000542032 MED23Q9ULK4 1368 aa2.21□□□□□ -2.06
LEMD3-204ENST00000542032 ZNF518AQ6AHZ1 1483 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 OVOS2A0A0J9YW53 1432 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 TECPR2O15040 1411 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 OVOS2Q6IE36 1432 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 SMG6Q86US8 1419 aaKnown RBP2.2□□□□□ -2.06
LEMD3-204ENST00000542032 TRAV5A0A0B4J249 113 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 IGHV3-64DA0A0J9YX35 117 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 A0A1W2PP18 115 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 FAM92AA1XBS5 289 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 C9orf170A2RU37 121 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 IGLL5B9A064 214 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 H7BYZ3 331 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 K7ERS5 55 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 TXNDC9O14530 226 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 SCTP09683 121 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 SMIM6P0DI80 62 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 CD28P10747 220 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 NTF3P20783 257 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 KDELR1P24390 212 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 NFYBP25208 207 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 CASP1P29466 404 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 RPS10P46783 165 aaKnown RBP2.2□□□□□ -2.06
LEMD3-204ENST00000542032 RPL30P62888 115 aaKnown RBP2.2□□□□□ -2.06
LEMD3-204ENST00000542032 SLC38A11Q08AI6 406 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 RTL8BQ17RB0 113 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 ZNF678Q5SXM1 525 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 HAGHLQ6PII5 290 aaPredicted RBP2.2□□□□□ -2.06
LEMD3-204ENST00000542032 NTM-AS1Q6ZSK4 140 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 LCA10Q71F78 164 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 PCP2Q8IVA1 136 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 H1FOOQ8IZA3 346 aaPredicted RBP2.2□□□□□ -2.06
LEMD3-204ENST00000542032 DAND5Q8N907 189 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 Q8N9L7 120 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 OR5C1Q8NGR4 320 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 ITLN2Q8WWU7 325 aaPredicted RBP2.2□□□□□ -2.06
LEMD3-204ENST00000542032 H1FXQ92522 213 aaKnown RBP2.2□□□□□ -2.06
LEMD3-204ENST00000542032 ARL11Q969Q4 196 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 BORCS8Q96FH0 119 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 PEBP4Q96S96 227 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 GPX7Q96SL4 187 aaPredicted RBP2.2□□□□□ -2.06
LEMD3-204ENST00000542032 NRTNQ99748 197 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 SLC25A21Q9BQT8 299 aaPredicted RBP2.2□□□□□ -2.06
LEMD3-204ENST00000542032 RTL8AQ9BWD3 113 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 MND1Q9BWT6 205 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 LINC00470Q9BZP3 86 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 YIPF3Q9GZM5 350 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 OR8D2Q9GZM6 311 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 LPAR5Q9H1C0 372 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 C21orf62Q9NYP8 219 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 TP73-AS1Q9UF72 201 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 NAT8BQ9UHF3 227 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 ADAMTSL1Q8N6G6 1762 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 CDC42BPBQ9Y5S2 1711 aa2.2□□□□□ -2.06
LEMD3-204ENST00000542032 FMN1Q68DA7 1419 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 CNTLNQ9NXG0 1405 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 IGHV3-21A0A0B4J1V1 117 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 IGKV1D-43A0A0B4J1Z2 117 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 A0A1B0GW54 56 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 TRDV1A0A1B0GX56 115 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 TMEM223A0PJW6 202 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 A6NDX4 124 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 J3QR89 54 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 LYZL6O75951 148 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 DPM2O94777 84 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 HLA-DQA1P01909 254 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 METTL15P1P0C7V9 234 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 LINC00869P0C866 280 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 IL1RNP18510 177 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 FKBP2P26885 142 aaKnown RBP2.19□□□□□ -2.06
LEMD3-204ENST00000542032 ZNF80P51504 273 aaPredicted RBP2.19□□□□□ -2.06
LEMD3-204ENST00000542032 NCS1P62166 190 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 CCL20P78556 96 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 SYCNQ0VAF6 134 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 EIF3IQ13347 325 aaKnown RBP2.19□□□□□ -2.06
LEMD3-204ENST00000542032 RRN3P1Q2M238 152 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 RNASE10Q5GAN6 216 aaKnown RBP2.19□□□□□ -2.06
LEMD3-204ENST00000542032 RPL22L1Q6P5R6 122 aaKnown RBP2.19□□□□□ -2.06
LEMD3-204ENST00000542032 SLC25A34Q6PIV7 304 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 AMTNQ6UX39 209 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 KTN1-AS1Q86SY8 53 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 AMN1Q8IY45 258 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 Q8N9W7 124 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 OR11G2Q8NGC1 345 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 OR5W2Q8NH69 310 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 OR4C6Q8NH72 309 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 CIRBP-AS1Q8TBR5 109 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 RNASE6Q93091 150 aaKnown RBP2.19□□□□□ -2.06
LEMD3-204ENST00000542032 NARS2Q96I59 477 aaKnown RBP2.19□□□□□ -2.06
LEMD3-204ENST00000542032 C14orf144Q96I85 54 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 TEX37Q96LM6 180 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 AP1S3Q96PC3 154 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 B9D2Q9BPU9 175 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 TBL1YQ9BQ87 522 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 OTORQ9NRC9 128 aa2.19□□□□□ -2.06
LEMD3-204ENST00000542032 NAT8Q9UHE5 227 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms