RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 SSX1Q16384 188 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 MORN2Q502X0 79 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 C22orf42Q6IC83 251 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 CNIH2Q6PI25 160 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 SLC25A48Q6ZT89 311 aaKnown RBP4.23□□□□□ -1.73
CPSF7-220ENST00000541963 C6orf201Q7Z4U5 140 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 TGIF2LXQ8IUE1 241 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 LYG1Q8N1E2 194 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 FAM89BQ8N5H3 189 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 C12orf45Q8N5I9 185 aaPredicted RBP4.23□□□□□ -1.73
CPSF7-220ENST00000541963 DRAM1Q8N682 238 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 KLHDC1Q8N7A1 406 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 OR2T10Q8NGZ9 312 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 OR1L1Q8NH94 360 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 MRPL30Q8TCC3 161 aaKnown RBP4.23□□□□□ -1.73
CPSF7-220ENST00000541963 FCAMRQ8WWV6 532 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 MARC2Q969Z3 335 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 PTX4Q96A99 478 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 NARS2Q96I59 477 aaKnown RBP4.23□□□□□ -1.73
CPSF7-220ENST00000541963 YPEL2Q96QA6 119 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 CMSS1Q9BQ75 279 aaKnown RBP4.23□□□□□ -1.73
CPSF7-220ENST00000541963 SULT4A1Q9BR01 284 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 GINS4Q9BRT9 223 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 NKX6-2Q9C056 277 aaPredicted RBP4.23□□□□□ -1.73
CPSF7-220ENST00000541963 LPAR5Q9H1C0 372 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 ABCG5Q9H222 651 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 OR51M1Q9H341 326 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 ZNF702PQ9H963 129 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 TXNL4BQ9NX01 149 aaKnown RBP4.23□□□□□ -1.73
CPSF7-220ENST00000541963 ZNF581Q9P0T4 197 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 PIPOXQ9P0Z9 390 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 ZNF580Q9UK33 172 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 SIGLEC9Q9Y336 463 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 MOB4Q9Y3A3 225 aa4.23□□□□□ -1.73
CPSF7-220ENST00000541963 IGHV1-3A0A0C4DH29 117 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 A0A0D9SG52 128 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 TMEM218A2RU14 115 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 PCP4L1A6NKN8 68 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 NCBP2LA6PVI3 153 aaKnown RBP4.22□□□□□ -1.73
CPSF7-220ENST00000541963 ITGB1BP1O14713 200 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 RAB29O14966 203 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 SOCS1O15524 211 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 FGF16O43320 207 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 SSNA1O43805 119 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 LANCL1O43813 399 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 CDK2AP2O75956 126 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 SCGNO76038 276 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 NAPSAO96009 420 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 MOSP00540 346 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 IGKV1D-33P01593 117 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 IGKV1-33P01594 117 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 OPN1MWP04001 364 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 TCRBP04435 133 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 OPN1MW2P0DN77 364 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 OPN1MW3P0DN78 364 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 RAB4AP20338 218 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 PVALBP20472 110 aaPredicted RBP4.22□□□□□ -1.73
CPSF7-220ENST00000541963 NFYAP23511 347 aaPredicted RBP4.22□□□□□ -1.73
CPSF7-220ENST00000541963 S100A11P31949 105 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 AKR1D1P51857 326 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 CLDN12P56749 244 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 KRTAP10-3P60369 221 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 TSPAN5P62079 268 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 SLC35B1P78383 322 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 ARFRP1Q13795 201 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 EBI3Q14213 229 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 KIR2DS1Q14954 304 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 HMGN3Q15651 99 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 ABCA11PQ4W5N1 156 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 CT45A1Q5HYN5 189 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 IDNKQ5T6J7 187 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 LPCAT3Q6P1A2 487 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 ZNF880Q6PDB4 577 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 NDUFA11Q86Y39 141 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 TOMM5Q8N4H5 51 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 OR4F17Q8NGA8 305 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 OR5AU1Q8NGC0 362 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 OR4X2Q8NGF9 303 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 OR10R2Q8NGX6 335 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 CT45A3Q8NHU0 189 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 UBALD1Q8TB05 177 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 RTN4IP1Q8WWV3 396 aaPredicted RBP4.22□□□□□ -1.73
CPSF7-220ENST00000541963 IL1F10Q8WWZ1 152 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 RAB3CQ96E17 227 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 OR4F4Q96R69 305 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 S1PR3Q99500 378 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 RASL11BQ9BPW5 248 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 NICN1Q9BSH3 213 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 PECRQ9BY49 303 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 ATG5Q9H1Y0 275 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 MIXL1Q9H2W2 232 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 COA4Q9NYJ1 87 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 AK3Q9UIJ7 227 aa4.22□□□□□ -1.73
CPSF7-220ENST00000541963 MRPS7Q9Y2R9 242 aaKnown RBP4.22□□□□□ -1.73
CPSF7-220ENST00000541963 A0A0A6YYD4 124 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 C13orf42A0A1B0GVH6 325 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 TCRBV4S1A1TA0A5B7 111 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 PMS2P5A8MQ11 134 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 SERPINE3A8MV23 424 aa4.21□□□□□ -1.74
CPSF7-220ENST00000541963 TRDCB7Z8K6 153 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms