RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 ANAPC10Q9UM13 185 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 IGHV3-64A0A075B6Q5 118 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 IGKV1D-33P01593 117 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 IGKV1-33P01594 117 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 FABP5P3A8MUU1 101 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 DUSP14O95147 198 aaKnown RBP13.05□□□□□ -0.32
HMGA2-210ENST00000541363 GSN-AS1Q9NRJ2 163 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 TRAV5A0A0B4J249 113 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 ZNF479Q96JC4 524 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 WBP1LQ9NX94 342 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 C21orf62Q9NYP8 219 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 TRGV11A0A075B6L2 103 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 NPC2P61916 151 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 IRF3Q14653 427 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 TMEM187Q14656 261 aa13.05□□□□□ -0.32
HMGA2-210ENST00000541363 KLF14Q8TD94 323 aaPredicted RBP13.04□□□□□ -0.32
HMGA2-210ENST00000541363 GPHA2Q96T91 129 aa13.04□□□□□ -0.32
HMGA2-210ENST00000541363 IFI27L2Q9H2X8 130 aa13.04□□□□□ -0.32
HMGA2-210ENST00000541363 ITGB4P16144 1822 aa13.04□□□□□ -0.32
HMGA2-210ENST00000541363 CISD3P0C7P0 127 aa13.04□□□□□ -0.32
HMGA2-210ENST00000541363 LINC01465Q8N7H1 131 aa13.04□□□□□ -0.32
HMGA2-210ENST00000541363 C5orf66Q9H5L9 145 aa13.04□□□□□ -0.32
HMGA2-210ENST00000541363 OTORQ9NRC9 128 aa13.04□□□□□ -0.32
HMGA2-210ENST00000541363 YLPM1P49750 1951 aaKnown RBP13.04□□□□□ -0.32
HMGA2-210ENST00000541363 PRTN3P24158 256 aa13.04□□□□□ -0.32
HMGA2-210ENST00000541363 DOCK5Q9H7D0 1870 aa13.04□□□□□ -0.32
HMGA2-210ENST00000541363 TM4SF5O14894 197 aa13.04□□□□□ -0.32
HMGA2-210ENST00000541363 RGPD4Q7Z3J3 1758 aa13.04□□□□□ -0.32
HMGA2-210ENST00000541363 COL9A1P20849 921 aa13.04□□□□□ -0.32
HMGA2-210ENST00000541363 SEC11AP67812 179 aa13.04□□□□□ -0.32
HMGA2-210ENST00000541363 MRPS18AQ9NVS2 196 aaKnown RBP13.04□□□□□ -0.32
HMGA2-210ENST00000541363 HS3ST3B1Q9Y662 390 aa13.04□□□□□ -0.32
HMGA2-210ENST00000541363 IGHV1-45A0A0A0MS14 117 aa13.03□□□□□ -0.32
HMGA2-210ENST00000541363 LINC01549A6NIU2 74 aa13.03□□□□□ -0.32
HMGA2-210ENST00000541363 A0A0U1RRA0 63 aa13.03□□□□□ -0.32
HMGA2-210ENST00000541363 GLMPQ8WWB7 406 aa13.03□□□□□ -0.32
HMGA2-210ENST00000541363 C2orf82Q6UX34 121 aa13.03□□□□□ -0.32
HMGA2-210ENST00000541363 HSD52Q0P140 79 aa13.03□□□□□ -0.32
HMGA2-210ENST00000541363 S4R3C0 116 aa13.03□□□□□ -0.32
HMGA2-210ENST00000541363 A0A0J9YW62 118 aa13.03□□□□□ -0.32
HMGA2-210ENST00000541363 IGFBP2P18065 325 aa13.02□□□□□ -0.32
HMGA2-210ENST00000541363 SPAARA0A1B0GVQ0 90 aa13.02□□□□□ -0.32
HMGA2-210ENST00000541363 LEPROTO15243 131 aa13.02□□□□□ -0.32
HMGA2-210ENST00000541363 EVI2AP22794 236 aa13.02□□□□□ -0.32
HMGA2-210ENST00000541363 DRAM1Q8N682 238 aa13.02□□□□□ -0.32
HMGA2-210ENST00000541363 NRN1Q9NPD7 142 aa13.02□□□□□ -0.32
HMGA2-210ENST00000541363 PLCH1Q4KWH8 1693 aa13.02□□□□□ -0.33
HMGA2-210ENST00000541363 A0A087WWC5 75 aa13.02□□□□□ -0.33
HMGA2-210ENST00000541363 LILRA1O75019 489 aa13.02□□□□□ -0.33
HMGA2-210ENST00000541363 C1QTNF12Q5T7M4 302 aa13.02□□□□□ -0.33
HMGA2-210ENST00000541363 CHCHD1Q96BP2 118 aaKnown RBP13.02□□□□□ -0.33
HMGA2-210ENST00000541363 ZNF703Q9H7S9 590 aaPredicted RBP13.02□□□□□ -0.33
HMGA2-210ENST00000541363 DDX60LQ5H9U9 1706 aaKnown RBP13.01□□□□□ -0.33
HMGA2-210ENST00000541363 ABHD17AQ96GS6 310 aa13.01□□□□□ -0.33
HMGA2-210ENST00000541363 RTTNQ86VV8 2226 aa13.01□□□□□ -0.33
HMGA2-210ENST00000541363 PPBPP02775 128 aa13.01□□□□□ -0.33
HMGA2-210ENST00000541363 APOBEC3AP31941 199 aaPredicted RBP13.01□□□□□ -0.33
HMGA2-210ENST00000541363 PCOLCEQ15113 449 aa13.01□□□□□ -0.33
HMGA2-210ENST00000541363 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.01□□□□□ -0.33
HMGA2-210ENST00000541363 OSR1Q8TAX0 266 aaPredicted RBP13.01□□□□□ -0.33
HMGA2-210ENST00000541363 TRAV9-2A0A087WT02 112 aa13.01□□□□□ -0.33
HMGA2-210ENST00000541363 LAGE3Q14657 143 aa13.01□□□□□ -0.33
HMGA2-210ENST00000541363 SLC50A1Q9BRV3 221 aa13.01□□□□□ -0.33
HMGA2-210ENST00000541363 BTAF1O14981 1849 aa13.01□□□□□ -0.33
HMGA2-210ENST00000541363 ANK1P16157 1881 aa13.01□□□□□ -0.33
HMGA2-210ENST00000541363 DUSP15Q9H1R2 295 aaPredicted RBP13.01□□□□□ -0.33
HMGA2-210ENST00000541363 ADMP35318 185 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 SLC25A47Q6Q0C1 308 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 MRPL52Q86TS9 123 aaKnown RBP13□□□□□ -0.33
HMGA2-210ENST00000541363 POC1AQ8NBT0 407 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 HLA-DQB1P01920 261 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 LINC01559Q495D7 138 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 RCC1LQ96I51 464 aaKnown RBP13□□□□□ -0.33
HMGA2-210ENST00000541363 FBXL15Q9H469 300 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 DPM3Q9P2X0 92 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 A0A087WX48 190 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 RPL39P5Q59GN2 51 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 FAM219BQ5XKK7 198 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 ZPLD1Q8TCW7 415 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 TRBV5-5A0A0J9YX44 114 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 F2Z2F3 143 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 ESDP10768 282 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 DRD3P35462 400 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 EFNB1P98172 346 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 CCL1P22362 96 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 NHLRC3Q5JS37 347 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 C9orf50Q5SZB4 431 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 OR13A1Q8NGR1 328 aa13□□□□□ -0.33
HMGA2-210ENST00000541363 TFF3Q07654 80 aa12.99□□□□□ -0.33
HMGA2-210ENST00000541363 GTF3AQ92664 365 aaKnown RBP12.99□□□□□ -0.33
HMGA2-210ENST00000541363 Q96M66 194 aa12.99□□□□□ -0.33
HMGA2-210ENST00000541363 CACNG8Q8WXS5 425 aa12.99□□□□□ -0.33
HMGA2-210ENST00000541363 FAM168AQ92567 244 aa12.99□□□□□ -0.33
HMGA2-210ENST00000541363 CEACAM8P31997 349 aaPredicted RBP12.99□□□□□ -0.33
HMGA2-210ENST00000541363 NRN1LQ496H8 165 aa12.99□□□□□ -0.33
HMGA2-210ENST00000541363 H3BMM0 161 aa12.99□□□□□ -0.33
HMGA2-210ENST00000541363 ATP5L2Q7Z4Y8 100 aa12.99□□□□□ -0.33
HMGA2-210ENST00000541363 UBE2WQ96B02 151 aa12.99□□□□□ -0.33
HMGA2-210ENST00000541363 SERF1AO75920 110 aa12.99□□□□□ -0.33
HMGA2-210ENST00000541363 HAPLN4Q86UW8 402 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms