RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 LRRC20Q8TCA0 184 aa19.56■□□□□ 0.72
TTC3-225ENST00000540756 Q96MF0 132 aa19.56■□□□□ 0.72
TTC3-225ENST00000540756 VSIRQ9H7M9 311 aa19.56■□□□□ 0.72
TTC3-225ENST00000540756 PFDN2Q9UHV9 154 aa19.56■□□□□ 0.72
TTC3-225ENST00000540756 IGLC7A0M8Q6 106 aa19.56■□□□□ 0.72
TTC3-225ENST00000540756 MFSD2BA6NFX1 497 aa19.56■□□□□ 0.72
TTC3-225ENST00000540756 NDUFA3O95167 84 aa19.56■□□□□ 0.72
TTC3-225ENST00000540756 FGF7P21781 194 aa19.56■□□□□ 0.72
TTC3-225ENST00000540756 RPL27AP46776 148 aaKnown RBP19.56■□□□□ 0.72
TTC3-225ENST00000540756 ARSJQ5FYB0 599 aaPredicted RBP19.56■□□□□ 0.72
TTC3-225ENST00000540756 LINC01356Q8N9X3 169 aa19.56■□□□□ 0.72
TTC3-225ENST00000540756 CREBBPQ92793 2442 aa19.55■□□□□ 0.72
TTC3-225ENST00000540756 NCBP2LA6PVI3 153 aaKnown RBP19.55■□□□□ 0.72
TTC3-225ENST00000540756 MDKP21741 143 aaPredicted RBP19.55■□□□□ 0.72
TTC3-225ENST00000540756 ERHP84090 104 aaKnown RBP19.55■□□□□ 0.72
TTC3-225ENST00000540756 EBI3Q14213 229 aa19.55■□□□□ 0.72
TTC3-225ENST00000540756 SAT2Q96F10 170 aaPredicted RBP19.55■□□□□ 0.72
TTC3-225ENST00000540756 MED9Q9NWA0 146 aa19.55■□□□□ 0.72
TTC3-225ENST00000540756 ITPR3Q14573 2671 aa19.55■□□□□ 0.72
TTC3-225ENST00000540756 A0A1W2PN81 502 aa19.54■□□□□ 0.72
TTC3-225ENST00000540756 TMEM11P17152 192 aa19.54■□□□□ 0.72
TTC3-225ENST00000540756 CHRNA7P36544 502 aa19.54■□□□□ 0.72
TTC3-225ENST00000540756 LOXL1Q08397 574 aaPredicted RBP19.54■□□□□ 0.72
TTC3-225ENST00000540756 C2orf83Q53S99 150 aa19.54■□□□□ 0.72
TTC3-225ENST00000540756 KLF17Q5JT82 389 aaPredicted RBP19.54■□□□□ 0.72
TTC3-225ENST00000540756 FAM213BQ8TBF2 198 aa19.54■□□□□ 0.72
TTC3-225ENST00000540756 PARD6GQ9BYG4 376 aaPredicted RBP19.54■□□□□ 0.72
TTC3-225ENST00000540756 A0A0U1RQK1 487 aa19.54■□□□□ 0.72
TTC3-225ENST00000540756 TEX22C9J3V5 150 aa19.54■□□□□ 0.72
TTC3-225ENST00000540756 INS-IGF2F8WCM5 200 aa19.54■□□□□ 0.72
TTC3-225ENST00000540756 CAMLGP49069 296 aa19.54■□□□□ 0.72
TTC3-225ENST00000540756 ZNF616Q08AN1 781 aa19.54■□□□□ 0.72
TTC3-225ENST00000540756 AANATQ16613 207 aa19.54■□□□□ 0.72
TTC3-225ENST00000540756 TREML4Q6UXN2 200 aa19.54■□□□□ 0.72
TTC3-225ENST00000540756 MBD6Q96DN6 1003 aa19.54■□□□□ 0.72
TTC3-225ENST00000540756 P2RX4Q99571 388 aa19.54■□□□□ 0.72
TTC3-225ENST00000540756 KIAA1456Q9P272 454 aa19.54■□□□□ 0.72
TTC3-225ENST00000540756 TRAV20A0A0B4J274 112 aa19.53■□□□□ 0.72
TTC3-225ENST00000540756 TGFAP01135 160 aa19.53■□□□□ 0.72
TTC3-225ENST00000540756 C5orf64Q2M2E5 130 aa19.53■□□□□ 0.72
TTC3-225ENST00000540756 BTNL8Q6UX41 500 aa19.53■□□□□ 0.72
TTC3-225ENST00000540756 SRSF12Q8WXF0 261 aaKnown RBP19.53■□□□□ 0.72
TTC3-225ENST00000540756 FAM103A1Q9BTL3 118 aaKnown RBP19.52■□□□□ 0.72
TTC3-225ENST00000540756 NPCDR1Q9BY65 106 aa19.52■□□□□ 0.72
TTC3-225ENST00000540756 PARP11Q9NR21 331 aa19.52■□□□□ 0.72
TTC3-225ENST00000540756 WDR83OSQ9Y284 106 aa19.52■□□□□ 0.72
TTC3-225ENST00000540756 AKAP9Q99996 3911 aa19.52■□□□□ 0.72
TTC3-225ENST00000540756 A0A1B0GV50 99 aa19.52■□□□□ 0.72
TTC3-225ENST00000540756 ANKRD34BA5PLL1 514 aa19.52■□□□□ 0.72
TTC3-225ENST00000540756 MAS1LP35410 378 aa19.52■□□□□ 0.72
TTC3-225ENST00000540756 ELLP55199 621 aaPredicted RBP19.52■□□□□ 0.72
TTC3-225ENST00000540756 CNIH1O95406 144 aa19.51■□□□□ 0.71
TTC3-225ENST00000540756 FAM106CPP0CH98 169 aa19.51■□□□□ 0.71
TTC3-225ENST00000540756 DLK1P80370 383 aa19.51■□□□□ 0.71
TTC3-225ENST00000540756 AGPAT2O15120 278 aa19.51■□□□□ 0.71
TTC3-225ENST00000540756 EIF3GO75821 320 aaKnown RBP eCLIP19.51■□□□□ 0.71
TTC3-225ENST00000540756 IGHV4-31P0DP07 118 aa19.51■□□□□ 0.71
TTC3-225ENST00000540756 S100A1P23297 94 aa19.51■□□□□ 0.71
TTC3-225ENST00000540756 MFAP2P55001 183 aa19.51■□□□□ 0.71
TTC3-225ENST00000540756 BLOC1S1P78537 153 aa19.51■□□□□ 0.71
TTC3-225ENST00000540756 AKR1C8PQ5T2L2 129 aa19.51■□□□□ 0.71
TTC3-225ENST00000540756 SSMEM1Q8WWF3 244 aa19.51■□□□□ 0.71
TTC3-225ENST00000540756 PSMG3Q9BT73 122 aaPredicted RBP19.51■□□□□ 0.71
TTC3-225ENST00000540756 IGHV3-48P01763 117 aa19.5■□□□□ 0.71
TTC3-225ENST00000540756 BRS3P32247 399 aa19.5■□□□□ 0.71
TTC3-225ENST00000540756 RAB5CP51148 216 aa19.5■□□□□ 0.71
TTC3-225ENST00000540756 TMEM249Q2WGJ8 235 aa19.5■□□□□ 0.71
TTC3-225ENST00000540756 ACSM6Q6P461 480 aa19.5■□□□□ 0.71
TTC3-225ENST00000540756 GGACTQ9BVM4 153 aa19.5■□□□□ 0.71
TTC3-225ENST00000540756 RPRMQ9NS64 109 aa19.5■□□□□ 0.71
TTC3-225ENST00000540756 UMAD1C9J7I0 102 aa19.49■□□□□ 0.71
TTC3-225ENST00000540756 SRSF3P84103 164 aaKnown RBP19.49■□□□□ 0.71
TTC3-225ENST00000540756 WFDC11Q8NEX6 87 aa19.49■□□□□ 0.71
TTC3-225ENST00000540756 MGST2Q99735 147 aa19.49■□□□□ 0.71
TTC3-225ENST00000540756 NDPQ00604 133 aa19.49■□□□□ 0.71
TTC3-225ENST00000540756 FXYD3Q14802 87 aa19.49■□□□□ 0.71
TTC3-225ENST00000540756 CENPVQ7Z7K6 275 aaPredicted RBP19.49■□□□□ 0.71
TTC3-225ENST00000540756 Q8N9W7 124 aa19.49■□□□□ 0.71
TTC3-225ENST00000540756 FNDC4Q9H6D8 234 aaPredicted RBP19.49■□□□□ 0.71
TTC3-225ENST00000540756 TRIM77I1YAP6 450 aa19.48■□□□□ 0.71
TTC3-225ENST00000540756 I3L521 148 aa19.48■□□□□ 0.71
TTC3-225ENST00000540756 SCAF4O95104 1147 aaKnown RBP19.48■□□□□ 0.71
TTC3-225ENST00000540756 LYPD6BQ8NI32 183 aa19.48■□□□□ 0.71
TTC3-225ENST00000540756 PIFOQ8TCI5 191 aa19.48■□□□□ 0.71
TTC3-225ENST00000540756 MARC2Q969Z3 335 aa19.48■□□□□ 0.71
TTC3-225ENST00000540756 GATA3P23771 443 aa19.47■□□□□ 0.71
TTC3-225ENST00000540756 AKR1C1Q04828 323 aa19.47■□□□□ 0.71
TTC3-225ENST00000540756 GAMTQ14353 236 aa19.47■□□□□ 0.71
TTC3-225ENST00000540756 SSX7Q7RTT5 188 aa19.47■□□□□ 0.71
TTC3-225ENST00000540756 TMEM219Q86XT9 240 aa19.47■□□□□ 0.71
TTC3-225ENST00000540756 OR2T6Q8NHC8 308 aa19.47■□□□□ 0.71
TTC3-225ENST00000540756 NPVFQ9HCQ7 196 aa19.47■□□□□ 0.71
TTC3-225ENST00000540756 LSM4Q9Y4Z0 139 aaKnown RBP19.47■□□□□ 0.71
TTC3-225ENST00000540756 DMRT1Q9Y5R6 373 aa19.47■□□□□ 0.71
TTC3-225ENST00000540756 DEFA4P12838 97 aa19.47■□□□□ 0.71
TTC3-225ENST00000540756 RAB2AP61019 212 aa19.47■□□□□ 0.71
TTC3-225ENST00000540756 CX3CL1P78423 397 aa19.47■□□□□ 0.71
TTC3-225ENST00000540756 PRSS57Q6UWY2 283 aa19.47■□□□□ 0.71
TTC3-225ENST00000540756 HSD17B13Q7Z5P4 300 aaPredicted RBP19.47■□□□□ 0.71
TTC3-225ENST00000540756 TIMM9Q9Y5J7 89 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms