RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 KIR2DL5BA0A0G2JN68 375 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 KIR2DL5BA0A0G2JPC4 375 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 NUPR2A6NF83 97 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 C15orf61A6NNL5 157 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 C15orf62A8K5M9 175 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 K7EMT4 169 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 SPRY2O43597 315 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 YIF1AO95070 293 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 EIF4EP06730 217 aaKnown RBP11.42□□□□□ -0.58
UBE3B-211ENST00000539843 NAT1P18440 290 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 HLA-DMAP28067 261 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 RPS19P39019 145 aaKnown RBP11.42□□□□□ -0.58
UBE3B-211ENST00000539843 LSM3P62310 102 aaKnown RBP11.42□□□□□ -0.58
UBE3B-211ENST00000539843 PHLDA2Q53GA4 152 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 KIR2DL5AQ8N109 375 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 OR1P1Q8NH06 330 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 KIR2DL5BQ8NHK3 375 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 SCARB1Q8WTV0 552 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 OVOL2Q9BRP0 275 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 FXYD6Q9H0Q3 95 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 UBQLN2Q9UHD9 624 aa11.42□□□□□ -0.58
UBE3B-211ENST00000539843 ATG12O94817 140 aa11.41□□□□□ -0.58
UBE3B-211ENST00000539843 TNFAIP8O95379 198 aa11.41□□□□□ -0.58
UBE3B-211ENST00000539843 RCVRNP35243 200 aa11.41□□□□□ -0.58
UBE3B-211ENST00000539843 SLC25A46Q96AG3 418 aa11.41□□□□□ -0.58
UBE3B-211ENST00000539843 MISP3Q96FF7 219 aa11.41□□□□□ -0.58
UBE3B-211ENST00000539843 TXN2Q99757 166 aa11.41□□□□□ -0.58
UBE3B-211ENST00000539843 COMMD3Q9UBI1 195 aa11.41□□□□□ -0.58
UBE3B-211ENST00000539843 RYR2Q92736 4967 aa11.41□□□□□ -0.58
UBE3B-211ENST00000539843 SCGB2A1O75556 95 aa11.4□□□□□ -0.58
UBE3B-211ENST00000539843 APOA1P02647 267 aa11.4□□□□□ -0.58
UBE3B-211ENST00000539843 CD5P06127 495 aa11.4□□□□□ -0.58
UBE3B-211ENST00000539843 MFAP4P55083 255 aa11.4□□□□□ -0.58
UBE3B-211ENST00000539843 PAFAH1B2P68402 229 aa11.4□□□□□ -0.58
UBE3B-211ENST00000539843 ERHP84090 104 aaKnown RBP11.4□□□□□ -0.58
UBE3B-211ENST00000539843 PMS2P11Q13670 270 aa11.4□□□□□ -0.58
UBE3B-211ENST00000539843 TBC1D26Q86UD7 250 aa11.4□□□□□ -0.58
UBE3B-211ENST00000539843 GALNT14Q96FL9 552 aa11.4□□□□□ -0.58
UBE3B-211ENST00000539843 GINS3Q9BRX5 216 aa11.4□□□□□ -0.58
UBE3B-211ENST00000539843 PDCD10Q9BUL8 212 aa11.4□□□□□ -0.58
UBE3B-211ENST00000539843 TMEM14BQ9NUH8 114 aa11.4□□□□□ -0.58
UBE3B-211ENST00000539843 KLK5Q9Y337 293 aaPredicted RBP11.4□□□□□ -0.58
UBE3B-211ENST00000539843 K7EIM0 57 aa11.39□□□□□ -0.59
UBE3B-211ENST00000539843 GNG7O60262 68 aa11.39□□□□□ -0.59
UBE3B-211ENST00000539843 TGFBR1P36897 503 aa11.39□□□□□ -0.59
UBE3B-211ENST00000539843 TNFRSF9Q07011 255 aa11.39□□□□□ -0.59
UBE3B-211ENST00000539843 DEFB135Q30KP9 77 aa11.39□□□□□ -0.59
UBE3B-211ENST00000539843 WFDC3Q8IUB2 231 aa11.39□□□□□ -0.59
UBE3B-211ENST00000539843 SNX29P2Q8IUI4 249 aa11.39□□□□□ -0.59
UBE3B-211ENST00000539843 TMEM116Q8NCL8 245 aa11.39□□□□□ -0.59
UBE3B-211ENST00000539843 GPX8Q8TED1 209 aa11.39□□□□□ -0.59
UBE3B-211ENST00000539843 YIPF6Q96EC8 236 aa11.39□□□□□ -0.59
UBE3B-211ENST00000539843 CHRDL1Q9BU40 450 aa11.39□□□□□ -0.59
UBE3B-211ENST00000539843 STARD9Q9P2P6 4700 aa11.38□□□□□ -0.59
UBE3B-211ENST00000539843 A0A0J9YWU9 116 aa11.38□□□□□ -0.59
UBE3B-211ENST00000539843 ZNF207O43670 478 aaKnown RBP11.38□□□□□ -0.59
UBE3B-211ENST00000539843 CTSDP07339 412 aaPredicted RBP11.38□□□□□ -0.59
UBE3B-211ENST00000539843 SNCAP37840 140 aa11.38□□□□□ -0.59
UBE3B-211ENST00000539843 UCP3P55916 312 aa11.38□□□□□ -0.59
UBE3B-211ENST00000539843 PRCDQ00LT1 54 aa11.38□□□□□ -0.59
UBE3B-211ENST00000539843 MZT2AQ6P582 158 aa11.38□□□□□ -0.59
UBE3B-211ENST00000539843 LYG2Q86SG7 212 aa11.38□□□□□ -0.59
UBE3B-211ENST00000539843 AP3S1Q92572 193 aa11.38□□□□□ -0.59
UBE3B-211ENST00000539843 RHPN1-AS1Q9BWJ2 59 aa11.38□□□□□ -0.59
UBE3B-211ENST00000539843 IGHV3OR16-8A0A075B7F1 116 aa11.37□□□□□ -0.59
UBE3B-211ENST00000539843 TRAV14DV4A0A0A6YYC5 116 aa11.37□□□□□ -0.59
UBE3B-211ENST00000539843 IGHV7-4-1A0A0J9YVY3 117 aa11.37□□□□□ -0.59
UBE3B-211ENST00000539843 FAM25AB3EWG3 89 aa11.37□□□□□ -0.59
UBE3B-211ENST00000539843 FAM25CB3EWG5 89 aa11.37□□□□□ -0.59
UBE3B-211ENST00000539843 FAM25GB3EWG6 89 aa11.37□□□□□ -0.59
UBE3B-211ENST00000539843 PGAM2P15259 253 aa11.37□□□□□ -0.59
UBE3B-211ENST00000539843 RPL35AP18077 110 aaKnown RBP11.37□□□□□ -0.59
UBE3B-211ENST00000539843 FCGR2BP31994 310 aaPredicted RBP11.37□□□□□ -0.59
UBE3B-211ENST00000539843 NPBWR1P48145 328 aa11.37□□□□□ -0.59
UBE3B-211ENST00000539843 AKR1C2P52895 323 aa11.37□□□□□ -0.59
UBE3B-211ENST00000539843 MFAP2P55001 183 aa11.37□□□□□ -0.59
UBE3B-211ENST00000539843 ZNF114Q8NC26 417 aa11.37□□□□□ -0.59
UBE3B-211ENST00000539843 PINX1Q96BK5 328 aaKnown RBP11.37□□□□□ -0.59
UBE3B-211ENST00000539843 ZNF486Q96H40 463 aaPredicted RBP11.37□□□□□ -0.59
UBE3B-211ENST00000539843 TMEM231Q9H6L2 316 aa11.37□□□□□ -0.59
UBE3B-211ENST00000539843 ENY2Q9NPA8 101 aa11.37□□□□□ -0.59
UBE3B-211ENST00000539843 SMPXQ9UHP9 88 aa11.37□□□□□ -0.59
UBE3B-211ENST00000539843 SACSQ9NZJ4 4579 aa11.37□□□□□ -0.59
UBE3B-211ENST00000539843 CSMD3Q7Z407 3707 aa11.37□□□□□ -0.59
UBE3B-211ENST00000539843 CORTO00230 105 aa11.36□□□□□ -0.59
UBE3B-211ENST00000539843 LY6G6CO95867 125 aa11.36□□□□□ -0.59
UBE3B-211ENST00000539843 MT-CO2P00403 227 aa11.36□□□□□ -0.59
UBE3B-211ENST00000539843 CTSGP08311 255 aa11.36□□□□□ -0.59
UBE3B-211ENST00000539843 ATF4P18848 351 aaPredicted RBP11.36□□□□□ -0.59
UBE3B-211ENST00000539843 ADMP35318 185 aa11.36□□□□□ -0.59
UBE3B-211ENST00000539843 RORCP51449 518 aa11.36□□□□□ -0.59
UBE3B-211ENST00000539843 SUB1P53999 127 aaKnown RBP eCLIP11.36□□□□□ -0.59
UBE3B-211ENST00000539843 HSPE1P61604 102 aaKnown RBP11.36□□□□□ -0.59
UBE3B-211ENST00000539843 ODF3L2Q3SX64 289 aa11.36□□□□□ -0.59
UBE3B-211ENST00000539843 RNASE10Q5GAN6 216 aaKnown RBP11.36□□□□□ -0.59
UBE3B-211ENST00000539843 LYSMD2Q8IV50 215 aa11.36□□□□□ -0.59
UBE3B-211ENST00000539843 SLC35G3Q8N808 338 aa11.36□□□□□ -0.59
UBE3B-211ENST00000539843 DUSP18Q8NEJ0 188 aa11.36□□□□□ -0.59
UBE3B-211ENST00000539843 RNASE11Q8TAA1 199 aaKnown RBP11.36□□□□□ -0.59
UBE3B-211ENST00000539843 C15orf40Q8WUR7 153 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms