RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 TBR1Q16650 682 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 KIAA1644Q3SXP7 199 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 OR10D3Q8NH80 312 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 WIPF2Q8TF74 440 aaPredicted RBP7.48□□□□□ -1.21
SNHG1-209ENST00000538654 POM121L2Q96KW2 1035 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 WDR54Q9H977 334 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 TMEM167BQ9NRX6 74 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 TSSC4Q9Y5U2 329 aaPredicted RBP7.48□□□□□ -1.21
SNHG1-209ENST00000538654 A0A087WWL8 130 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 TMEM30CPA0ZSE6 113 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 IZUMO1RA6ND01 250 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 FAM181BA6NEQ2 426 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 J3QR06 171 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 MRPL33O75394 65 aaKnown RBP7.48□□□□□ -1.21
SNHG1-209ENST00000538654 FRMD6-AS1P0C7T7 363 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 CFHR2P36980 270 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 UBE2G1P62253 170 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 PLP2Q04941 152 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 HYAL1Q12794 435 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 MIC13Q5XKP0 118 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 FAM19A2Q8N3H0 131 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 ZNF808Q8N4W9 903 aaPredicted RBP7.48□□□□□ -1.21
SNHG1-209ENST00000538654 C11orf44Q8N8P7 122 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 OR8B3Q8NGG8 313 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 OR52E5Q8NH55 327 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 OR8B2Q96RD0 313 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 RTL8AQ9BWD3 113 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 ST20Q9HBF5 79 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 NPVFQ9HCQ7 196 aa7.48□□□□□ -1.21
SNHG1-209ENST00000538654 GON4LQ3T8J9 2241 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 ZNF407Q9C0G0 2248 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 ASXL3Q9C0F0 2248 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 CA6P23280 308 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 ARG2P78540 354 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 EFNB3Q15768 340 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 PRSS57Q6UWY2 283 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 Q6ZVH6 145 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 ATOH7Q8N100 152 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 UBALD1Q8TB05 177 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 C18orf32Q8TCD1 76 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 SMIM12Q96EX1 92 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 COMMD5Q9GZQ3 224 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 CSTL1Q9H114 145 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 ZFAND3Q9H8U3 227 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 SAP30LQ9HAJ7 183 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 GTF3C1Q12789 2109 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 IGHV1-45A0A0A0MS14 117 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 M0R2Z0 102 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 NGFP01138 241 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 IGLL1P15814 213 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 USF1P22415 310 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-209ENST00000538654 PLGLB1Q02325 96 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 KLF5Q13887 457 aaPredicted RBP7.47□□□□□ -1.21
SNHG1-209ENST00000538654 ZNF146Q15072 292 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 RTL8BQ17RB0 113 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 SPINK9Q5DT21 86 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 LDLRAD2Q5SZI1 272 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 C12orf54Q6X4T0 127 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 PQLC2Q6ZP29 291 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 Q6ZS52 159 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 DEPPQ9NTK1 212 aa7.47□□□□□ -1.21
SNHG1-209ENST00000538654 TMEM265A0A087WTH1 108 aa7.46□□□□□ -1.21
SNHG1-209ENST00000538654 SPINK4O60575 86 aa7.46□□□□□ -1.21
SNHG1-209ENST00000538654 P04436 131 aa7.46□□□□□ -1.21
SNHG1-209ENST00000538654 PLA2G2CQ5R387 149 aa7.46□□□□□ -1.21
SNHG1-209ENST00000538654 IBA57Q5T440 356 aaKnown RBP7.46□□□□□ -1.21
SNHG1-209ENST00000538654 PRR27Q6MZM9 219 aa7.46□□□□□ -1.21
SNHG1-209ENST00000538654 LSM4Q9Y4Z0 139 aaKnown RBP7.46□□□□□ -1.21
SNHG1-209ENST00000538654 CHD9Q3L8U1 2897 aa7.46□□□□□ -1.22
SNHG1-209ENST00000538654 NPY1RP25929 384 aa7.46□□□□□ -1.22
SNHG1-209ENST00000538654 BRWD1-AS2P59051 145 aa7.46□□□□□ -1.22
SNHG1-209ENST00000538654 Q56UQ5 140 aa7.46□□□□□ -1.22
SNHG1-209ENST00000538654 OR4A47Q6IF82 309 aa7.46□□□□□ -1.22
SNHG1-209ENST00000538654 LCN12Q6JVE5 192 aa7.46□□□□□ -1.22
SNHG1-209ENST00000538654 MRPL54Q6P161 138 aaKnown RBP7.46□□□□□ -1.22
SNHG1-209ENST00000538654 TEPPQ6URK8 271 aa7.46□□□□□ -1.22
SNHG1-209ENST00000538654 IMMP1LQ96LU5 166 aa7.46□□□□□ -1.22
SNHG1-209ENST00000538654 C1RLQ9NZP8 487 aa7.46□□□□□ -1.22
SNHG1-209ENST00000538654 IGKV3D-15A0A087WSY6 115 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 PRSS46E5RG02 174 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 CELA2AP08217 269 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 ERVK11-1P61568 191 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 SLC35E4Q6ICL7 350 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 DOLPP1Q86YN1 238 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 DEFB125Q8N687 156 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 ABHD3Q8WU67 409 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 TMEM70Q9BUB7 260 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 RNASE7Q9H1E1 156 aaKnown RBP7.45□□□□□ -1.22
SNHG1-209ENST00000538654 C12orf77C9JDV5 145 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 M0R1X1 148 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 IGHV3-9P01782 118 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 REG1BP48304 166 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 OR1C1Q15619 314 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 SLC23A3Q6PIS1 610 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 ZNF841Q6ZN19 808 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 STPG3Q8N7X2 389 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 PRRG4Q9BZD6 226 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 UNC80Q8N2C7 3258 aa7.45□□□□□ -1.22
SNHG1-209ENST00000538654 TAX1BP3O14907 124 aa7.44□□□□□ -1.22
SNHG1-209ENST00000538654 CGAP01215 116 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms