RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 RUSC1-AS1Q66K80 236 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 LAIR2Q6ISS4 152 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 CHAC2Q8WUX2 184 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 TBX15Q96SF7 602 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 ZDBF2Q9HCK1 2354 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.46□□□□□ -1.7
LRP6-203ENST00000538239 TMEM218A2RU14 115 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 CRYGSP22914 178 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 UQCRFS1P47985 274 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 ZP1P60852 638 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 RPS11P62280 158 aaKnown RBP eCLIP4.46□□□□□ -1.7
LRP6-203ENST00000538239 PRSS8Q16651 343 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 LYPD2Q6UXB3 125 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 OR10S1Q8NGN2 331 aa4.46□□□□□ -1.7
LRP6-203ENST00000538239 TRAV41A0A0B4J266 112 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 MUC21A0A0G2JKD1 596 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 MUC21A0A140T8X8 626 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 PRR32B1ATL7 298 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 UPK2O00526 184 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 IQCJQ1A5X6 159 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 MUC21Q5SSG8 566 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 PIP4P1Q86T03 277 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 MIEN1Q9BRT3 115 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 TRAV14DV4A0A0A6YYC5 116 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 TRAV20A0A0B4J274 112 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 SHISA3A0PJX4 238 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 M0R381 172 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 GGCTO75223 188 aaKnown RBP4.45□□□□□ -1.7
LRP6-203ENST00000538239 IGHV1-8P0DP01 117 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 MYOD1P15172 320 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 GCHFRP30047 84 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 CCKARP32238 428 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 RPS20P60866 119 aaKnown RBP4.45□□□□□ -1.7
LRP6-203ENST00000538239 ELOBQ15370 118 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 RNF151Q2KHN1 245 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 CD177Q8N6Q3 437 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 SGMS2Q8NHU3 365 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 TMEM167AQ8TBQ9 72 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 NPDC1Q9NQX5 325 aaPredicted RBP4.45□□□□□ -1.7
LRP6-203ENST00000538239 IGKV1D-13A0A0B4J2D9 117 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 AP4M1O00189 453 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 IGKV1-13P0DP09 117 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 SNRPEP62304 92 aaKnown RBP4.45□□□□□ -1.7
LRP6-203ENST00000538239 SRSF9Q13242 221 aaKnown RBP eCLIP4.45□□□□□ -1.7
LRP6-203ENST00000538239 LHFPL4Q7Z7J7 247 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 SULT1A2P50226 295 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 FAM3BP58499 235 aaPredicted RBP4.45□□□□□ -1.7
LRP6-203ENST00000538239 SMUG1Q53HV7 270 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 TPTE2P1Q5T6R2 138 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 LEMD1Q68G75 181 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 NPCDR1Q9BY65 106 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 C7orf77A4D0Y5 90 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 ZNF343Q6P1L6 599 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 IL17RELQ6ZVW7 336 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 CBLN2Q8IUK8 224 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 RPRMQ9NS64 109 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 C5orf52A6NGY3 159 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 ASIPP42127 132 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 ADIPOQQ15848 244 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 SPSB4Q96A44 273 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 TMEM191AQ9H0A3 160 aa4.45□□□□□ -1.7
LRP6-203ENST00000538239 TRBV6-7A0A0A0MS04 114 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 CGAP01215 116 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 CCL1P22362 96 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 IFITM3Q01628 133 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 KIR3DL3Q8N743 410 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 GAFA1Q96PS6 74 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 RTBDNQ9BSG5 229 aaPredicted RBP4.44□□□□□ -1.7
LRP6-203ENST00000538239 RBFOX2O43251 390 aaKnown RBP eCLIP4.44□□□□□ -1.7
LRP6-203ENST00000538239 TMEM183BQ1AE95 376 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 COX19Q49B96 90 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 UBE2DNLQ8IWF7 75 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 MAP1LC3AQ9H492 121 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 KIF26AQ9ULI4 1882 aaPredicted RBP4.44□□□□□ -1.7
LRP6-203ENST00000538239 OR9G9P0C7N8 305 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 RPL35AP18077 110 aaKnown RBP4.44□□□□□ -1.7
LRP6-203ENST00000538239 H2BFSP57053 126 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 MEF2BQ02080 365 aaPredicted RBP4.44□□□□□ -1.7
LRP6-203ENST00000538239 DHRS11Q6UWP2 260 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 ZNF329Q86UD4 541 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 KLHL30-AS1Q8NEE0 82 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 RNASEH2CQ8TDP1 164 aaKnown RBP4.44□□□□□ -1.7
LRP6-203ENST00000538239 C19orf24Q9BVV8 132 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 TNFRSF18Q9Y5U5 241 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 RP1P56715 2156 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 A0A0A6YYD4 124 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 IGHV1-3A0A0C4DH29 117 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 C5orf63A6NC05 138 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 NBEAP1P0C6P0 100 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 TRGC1P0CF51 173 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 MAP1BP46821 2468 aaKnown RBP4.44□□□□□ -1.7
LRP6-203ENST00000538239 GCSHP23434 173 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 RND3P61587 244 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 PAX8Q06710 450 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 LCNL1Q6ZST4 164 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 OR10W1Q8NGF6 305 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 PRO1933Q9H354 126 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 CACNA1IQ9P0X4 2223 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 FAM74A7A6NL05 159 aa4.44□□□□□ -1.7
LRP6-203ENST00000538239 C15orf61A6NNL5 157 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms