RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 PCSK4Q6UW60 755 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 TEX29Q8N6K0 151 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 NUP35Q8NFH5 326 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 RLN3Q8WXF3 142 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 C20orf78Q9BR46 151 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 C1QTNF5Q9BXJ0 243 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 DEPPQ9NTK1 212 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 MBNL3Q9NUK0 354 aaKnown RBP7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 RNF186Q9NXI6 227 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 C3orf80F5H4A9 247 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 MT-ATP8P03928 68 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 GDF5OSQ5U4N7 250 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 ZNF611Q8N823 705 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 ATP6V0E2Q8NHE4 81 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 ST8SIA1Q92185 356 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 ABHD17AQ96GS6 310 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 CDIP1Q9H305 208 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 TMEM167BQ9NRX6 74 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 DUSP13Q9UII6 198 aa7.06□□□□□ -1.28
SRGAP1-202ENST00000537556 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 PVRP15151 417 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 G6PCP35575 357 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 ID1P41134 155 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 FOXI1Q12951 378 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 FAM231DQ6ZW35 169 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 SFTPA2Q8IWL1 248 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 SFTPA1Q8IWL2 248 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 ZADH2Q8N4Q0 377 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 MCRIP2Q9BUT9 160 aaKnown RBP7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 HRASLS2Q9NWW9 162 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 TBC1D29Q9UFV1 150 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 PRRC2BQ5JSZ5 2229 aaKnown RBP7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 ZG16O60844 167 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 THBDP07204 575 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 GABRG2P18507 467 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 NTF4P34130 210 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 CARD17Q5XLA6 110 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 FOXL2NBQ6ZUU3 175 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 PRDM6Q9NQX0 595 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 IDI2-AS1Q9NZ38 188 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 NCOA6Q14686 2063 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 CACNA1IQ9P0X4 2223 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 A0A1B0GWB2 263 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 E9PLD3 99 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 H3BMG7 143 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 CSN1S1P47710 185 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 CATR1Q13166 79 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 RHBDD2Q6NTF9 364 aa7.05□□□□□ -1.28
SRGAP1-202ENST00000537556 C2CD4DB7Z1M9 353 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 GCSHP23434 173 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 FBXW4P57775 412 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 RPS16P62249 146 aaKnown RBP7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 HBBP68871 147 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 SPATA46Q5T0L3 261 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 DTX1Q86Y01 620 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 ZNF808Q8N4W9 903 aaPredicted RBP7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 SSBP3Q9BWW4 388 aaPredicted RBP7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 TM2D2Q9BX73 214 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 ZNF355PQ9NSJ1 428 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 MPC1Q9Y5U8 109 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 CCL15-CCL14A0A0B4J2E2 113 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 IGLV2-8P01709 118 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 INSL3P51460 131 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 FOXA3P55318 350 aaPredicted RBP7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 GNG3P63215 75 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 ZNF146Q15072 292 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 TMEM42Q69YG0 159 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 DDB2Q92466 427 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 FGF22Q9HCT0 170 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 INSIG2Q9Y5U4 225 aa7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 SOX21Q9Y651 276 aaPredicted RBP7.04□□□□□ -1.28
SRGAP1-202ENST00000537556 COL4A6Q14031 1691 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 HIGD1CA8MV81 97 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 CELA2BP08218 269 aaPredicted RBP7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 CT45A10P0DMU9 189 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 FASLGP48023 281 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 XGP55808 180 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 EFNB3Q15768 340 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 PSMG4Q5JS54 123 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 MIC13Q5XKP0 118 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 Q6AWC8 147 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 Q6ZS92 163 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 FAM168AQ92567 244 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 A0A1B0GXF2 115 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 FABP5P3A8MUU1 101 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 CFHR2P36980 270 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 ERVK11-1P61568 191 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 TREML4Q6UXN2 200 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 PPP1R32Q7Z5V6 425 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 BCL6BQ8N143 479 aaPredicted RBP7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 MRPL43Q8N983 215 aaKnown RBP7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 ZNF747Q9BV97 191 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 CHRNA10Q9GZZ6 450 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 PLEKHA3Q9HB20 300 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 GCM1Q9NP62 436 aa7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 SLC25A10Q9UBX3 287 aaPredicted RBP7.03□□□□□ -1.28
SRGAP1-202ENST00000537556 A0A1W2PQM1 296 aa7.02□□□□□ -1.28
SRGAP1-202ENST00000537556 A8MWL6 223 aa7.02□□□□□ -1.28
SRGAP1-202ENST00000537556 NPIPB11E5RHQ5 1161 aa7.02□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms