RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 FANCD2OSQ96PS1 177 aa16.83■□□□□ 0.28
SSPN-204ENST00000535504 BATF3Q9NR55 127 aa16.83■□□□□ 0.28
SSPN-204ENST00000535504 F11RQ9Y624 299 aaKnown RBP16.83■□□□□ 0.28
SSPN-204ENST00000535504 GGCTO75223 188 aaKnown RBP16.82■□□□□ 0.28
SSPN-204ENST00000535504 SNCAP37840 140 aa16.82■□□□□ 0.28
SSPN-204ENST00000535504 HOXA1P49639 335 aaPredicted RBP16.82■□□□□ 0.28
SSPN-204ENST00000535504 SUB1P53999 127 aaKnown RBP eCLIP16.82■□□□□ 0.28
SSPN-204ENST00000535504 WT1-ASQ06250 92 aa16.82■□□□□ 0.28
SSPN-204ENST00000535504 EGFEM1PQ0D2K5 195 aa16.82■□□□□ 0.28
SSPN-204ENST00000535504 TMEM128Q5BJH2 165 aa16.82■□□□□ 0.28
SSPN-204ENST00000535504 LINC00299Q6ZSB3 139 aa16.82■□□□□ 0.28
SSPN-204ENST00000535504 LGI3Q8N145 548 aa16.82■□□□□ 0.28
SSPN-204ENST00000535504 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.82■□□□□ 0.28
SSPN-204ENST00000535504 LINC00854A0A1B0GVQ3 168 aa16.81■□□□□ 0.28
SSPN-204ENST00000535504 WIPF1O43516 503 aa16.81■□□□□ 0.28
SSPN-204ENST00000535504 NDUFB8O95169 186 aa16.81■□□□□ 0.28
SSPN-204ENST00000535504 VAMP1P23763 118 aa16.81■□□□□ 0.28
SSPN-204ENST00000535504 ARL3P36405 182 aa16.81■□□□□ 0.28
SSPN-204ENST00000535504 SYNJ2BPP57105 145 aa16.81■□□□□ 0.28
SSPN-204ENST00000535504 BAK1Q16611 211 aa16.81■□□□□ 0.28
SSPN-204ENST00000535504 ACSM6Q6P461 480 aa16.81■□□□□ 0.28
SSPN-204ENST00000535504 CLEC19AQ6UXS0 136 aa16.81■□□□□ 0.28
SSPN-204ENST00000535504 C19orf35Q6ZS72 473 aa16.81■□□□□ 0.28
SSPN-204ENST00000535504 SELENOHQ8IZQ5 122 aaKnown RBP16.81■□□□□ 0.28
SSPN-204ENST00000535504 CENPSQ8N2Z9 138 aa16.81■□□□□ 0.28
SSPN-204ENST00000535504 OR1P1Q8NH06 330 aa16.81■□□□□ 0.28
SSPN-204ENST00000535504 AURKAIP1Q9NWT8 199 aaPredicted RBP16.81■□□□□ 0.28
SSPN-204ENST00000535504 CMYA5Q8N3K9 4069 aa16.8■□□□□ 0.28
SSPN-204ENST00000535504 PRB2P02812 416 aaPredicted RBP16.8■□□□□ 0.28
SSPN-204ENST00000535504 KLK9Q2XQG4 91 aa16.8■□□□□ 0.28
SSPN-204ENST00000535504 OR9G4Q8NGQ1 327 aa16.8■□□□□ 0.28
SSPN-204ENST00000535504 VN1R17PQ8TDU5 208 aa16.8■□□□□ 0.28
SSPN-204ENST00000535504 GAR1Q9NY12 217 aaKnown RBP16.8■□□□□ 0.28
SSPN-204ENST00000535504 KLK9Q9UKQ9 250 aa16.8■□□□□ 0.28
SSPN-204ENST00000535504 TMEM56-RWDD3S4R434 201 aa16.8■□□□□ 0.28
SSPN-204ENST00000535504 DBX1A6NMT0 343 aa16.79■□□□□ 0.28
SSPN-204ENST00000535504 ST8SIA3O43173 380 aa16.79■□□□□ 0.28
SSPN-204ENST00000535504 LY86O95711 162 aa16.79■□□□□ 0.28
SSPN-204ENST00000535504 TRBV12-3P01733 135 aa16.79■□□□□ 0.28
SSPN-204ENST00000535504 IGHV3-23P01764 117 aa16.79■□□□□ 0.28
SSPN-204ENST00000535504 IL7P13232 177 aa16.79■□□□□ 0.28
SSPN-204ENST00000535504 KLF5Q13887 457 aaPredicted RBP16.79■□□□□ 0.28
SSPN-204ENST00000535504 TMEM187Q14656 261 aa16.79■□□□□ 0.28
SSPN-204ENST00000535504 IZUMO4Q1ZYL8 232 aa16.79■□□□□ 0.28
SSPN-204ENST00000535504 CNPY1Q3B7I2 92 aa16.79■□□□□ 0.28
SSPN-204ENST00000535504 FAM106AQ4KMX7 169 aa16.79■□□□□ 0.28
SSPN-204ENST00000535504 OR2C3Q8N628 320 aa16.79■□□□□ 0.28
SSPN-204ENST00000535504 TMEM230Q96A57 120 aa16.79■□□□□ 0.28
SSPN-204ENST00000535504 A0A0B4J293 547 aa16.78■□□□□ 0.28
SSPN-204ENST00000535504 A0A0B4J2A0 478 aa16.78■□□□□ 0.28
SSPN-204ENST00000535504 A6NHS1 94 aa16.78■□□□□ 0.28
SSPN-204ENST00000535504 P0C879 139 aa16.78■□□□□ 0.28
SSPN-204ENST00000535504 SULT1A3P0DMM9 295 aa16.78■□□□□ 0.28
SSPN-204ENST00000535504 SULT1A4P0DMN0 295 aa16.78■□□□□ 0.28
SSPN-204ENST00000535504 SPCS3P61009 180 aa16.78■□□□□ 0.28
SSPN-204ENST00000535504 UBE2MP61081 183 aaKnown RBP16.78■□□□□ 0.28
SSPN-204ENST00000535504 MISP3Q96FF7 219 aa16.78■□□□□ 0.28
SSPN-204ENST00000535504 CCDC32Q9BV29 185 aa16.78■□□□□ 0.28
SSPN-204ENST00000535504 CACNG5Q9UF02 275 aa16.78■□□□□ 0.28
SSPN-204ENST00000535504 SHPKQ9UHJ6 478 aa16.78■□□□□ 0.28
SSPN-204ENST00000535504 S4R3C0 116 aa16.78■□□□□ 0.28
SSPN-204ENST00000535504 DUXBA0A1W2PPF3 345 aa16.77■□□□□ 0.28
SSPN-204ENST00000535504 PPP5D1E7EU14 171 aa16.77■□□□□ 0.28
SSPN-204ENST00000535504 CORTO00230 105 aa16.77■□□□□ 0.28
SSPN-204ENST00000535504 BMPR1BO00238 502 aa16.77■□□□□ 0.28
SSPN-204ENST00000535504 PLET1Q6UQ28 207 aa16.77■□□□□ 0.28
SSPN-204ENST00000535504 ZNF114Q8NC26 417 aa16.77■□□□□ 0.28
SSPN-204ENST00000535504 PTTG2Q9NZH5 202 aa16.77■□□□□ 0.28
SSPN-204ENST00000535504 MFSD2BA6NFX1 497 aa16.76■□□□□ 0.27
SSPN-204ENST00000535504 CEBPZOSA8MTT3 80 aa16.76■□□□□ 0.27
SSPN-204ENST00000535504 CLEC3BP05452 202 aa16.76■□□□□ 0.27
SSPN-204ENST00000535504 GPR183P32249 361 aa16.76■□□□□ 0.27
SSPN-204ENST00000535504 CCR6P51684 374 aa16.76■□□□□ 0.27
SSPN-204ENST00000535504 Q56UQ5 140 aa16.76■□□□□ 0.27
SSPN-204ENST00000535504 SPINK9Q5DT21 86 aa16.76■□□□□ 0.27
SSPN-204ENST00000535504 DEFB121Q5J5C9 76 aa16.76■□□□□ 0.27
SSPN-204ENST00000535504 OR52E5Q8NH55 327 aa16.76■□□□□ 0.27
SSPN-204ENST00000535504 LHFPL5Q8TAF8 219 aa16.76■□□□□ 0.27
SSPN-204ENST00000535504 CCDC140Q96MF4 163 aa16.76■□□□□ 0.27
SSPN-204ENST00000535504 ATP6V0BQ99437 205 aa16.76■□□□□ 0.27
SSPN-204ENST00000535504 C21orf62Q9NYP8 219 aa16.76■□□□□ 0.27
SSPN-204ENST00000535504 ZNF256Q9Y2P7 627 aaPredicted RBP16.76■□□□□ 0.27
SSPN-204ENST00000535504 SCGB2A1O75556 95 aa16.75■□□□□ 0.27
SSPN-204ENST00000535504 NDUFB6O95139 128 aa16.75■□□□□ 0.27
SSPN-204ENST00000535504 KRTAP10-11P60412 298 aa16.75■□□□□ 0.27
SSPN-204ENST00000535504 UBAC2Q8NBM4 344 aa16.75■□□□□ 0.27
SSPN-204ENST00000535504 ZNF502Q8TBZ5 544 aa16.75■□□□□ 0.27
SSPN-204ENST00000535504 GPR146Q96CH1 333 aa16.75■□□□□ 0.27
SSPN-204ENST00000535504 BSCL2Q96G97 398 aaPredicted RBP16.75■□□□□ 0.27
SSPN-204ENST00000535504 WDR12Q9GZL7 423 aaKnown RBP16.75■□□□□ 0.27
SSPN-204ENST00000535504 HIPK2Q9H2X6 1198 aa16.75■□□□□ 0.27
SSPN-204ENST00000535504 PALMDQ9NP74 551 aa16.75■□□□□ 0.27
SSPN-204ENST00000535504 MEGF8Q7Z7M0 2845 aa16.74■□□□□ 0.27
SSPN-204ENST00000535504 A0A0G2JRQ6 117 aa16.74■□□□□ 0.27
SSPN-204ENST00000535504 INS-IGF2F8WCM5 200 aa16.74■□□□□ 0.27
SSPN-204ENST00000535504 SMCO1Q147U7 214 aa16.74■□□□□ 0.27
SSPN-204ENST00000535504 SPSB3Q6PJ21 355 aa16.74■□□□□ 0.27
SSPN-204ENST00000535504 DYNLRB2Q8TF09 96 aa16.74■□□□□ 0.27
SSPN-204ENST00000535504 PINX1Q96BK5 328 aaKnown RBP16.74■□□□□ 0.27
SSPN-204ENST00000535504 SDHCQ99643 169 aaPredicted RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms