RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 IGHV1-2P23083 117 aa10.65□□□□□ -0.7
SPG11-203ENST00000535302 HLA-DQA1P01909 254 aa10.65□□□□□ -0.71
SPG11-203ENST00000535302 RPL35AP18077 110 aaKnown RBP10.65□□□□□ -0.71
SPG11-203ENST00000535302 NMBP08949 121 aa10.65□□□□□ -0.71
SPG11-203ENST00000535302 CKS1BP61024 79 aa10.65□□□□□ -0.71
SPG11-203ENST00000535302 PPP1R27Q86WC6 154 aa10.65□□□□□ -0.71
SPG11-203ENST00000535302 ZNF625Q96I27 306 aaPredicted RBP10.65□□□□□ -0.71
SPG11-203ENST00000535302 MPDZO75970 2070 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 DPRXA6NFQ7 191 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 OR11H12B2RN74 326 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 OR11H1Q8NG94 326 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 OR11H2Q8NH07 326 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 PHLDA1Q8WV24 401 aaPredicted RBP10.64□□□□□ -0.71
SPG11-203ENST00000535302 FAM168AQ92567 244 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 ZNF729A6NN14 1252 aaPredicted RBP10.64□□□□□ -0.71
SPG11-203ENST00000535302 C17orf98A8MV24 154 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 ATP5G3P48201 142 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 MPTX1A8MV57 137 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 B9A039 149 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 HOXA5P20719 270 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 DDTP30046 118 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 MEF2CQ06413 473 aaPredicted RBP10.64□□□□□ -0.71
SPG11-203ENST00000535302 ALX4Q9H161 411 aaPredicted RBP10.64□□□□□ -0.71
SPG11-203ENST00000535302 GP6Q9HCN6 339 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 RBMY1BA6NDE4 496 aaKnown RBP10.64□□□□□ -0.71
SPG11-203ENST00000535302 RBMY1EA6NEQ0 496 aaKnown RBP10.64□□□□□ -0.71
SPG11-203ENST00000535302 IL6RP08887 468 aaPredicted RBP10.64□□□□□ -0.71
SPG11-203ENST00000535302 RBMY1DP0C7P1 496 aaKnown RBP10.64□□□□□ -0.71
SPG11-203ENST00000535302 RBMY1A1P0DJD3 496 aaKnown RBP10.64□□□□□ -0.71
SPG11-203ENST00000535302 RBMY1CP0DJD4 496 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 COPS9Q8WXC6 57 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 AICDAQ9GZX7 198 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 CABIN1Q9Y6J0 2220 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 C9orf106Q8NAJ2 232 aa10.64□□□□□ -0.71
SPG11-203ENST00000535302 RNASE7Q9H1E1 156 aaKnown RBP10.64□□□□□ -0.71
SPG11-203ENST00000535302 IGHMP01871 453 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 VKORC1Q9BQB6 163 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 FAM181AQ8N9Y4 354 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 TMEM186Q96B77 213 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 TRGV4A0A0C4DH28 118 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 C12orf77C9JDV5 145 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 NDUFA2O43678 99 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 GATD1Q8NB37 220 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 TRAV30A0A087WSZ9 112 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 SLC25A20O43772 301 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 RPS20P60866 119 aaKnown RBP10.63□□□□□ -0.71
SPG11-203ENST00000535302 OR10J3Q5JRS4 329 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 ZNF48Q96MX3 618 aaPredicted RBP10.63□□□□□ -0.71
SPG11-203ENST00000535302 SHISA3A0PJX4 238 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 MSGN1A6NI15 193 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 PTGDSP41222 190 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 VWCEQ96DN2 955 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 MRPL20Q9BYC9 149 aaKnown RBP10.63□□□□□ -0.71
SPG11-203ENST00000535302 MEGF9Q9H1U4 602 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 VDAC2P45880 294 aaPredicted RBP10.63□□□□□ -0.71
SPG11-203ENST00000535302 CSRP2Q16527 193 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 OR9G4Q8NGQ1 327 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 SEC16AO15027 2179 aa10.63□□□□□ -0.71
SPG11-203ENST00000535302 IGHV2OR16-5A0A0B4J2B6 119 aa10.62□□□□□ -0.71
SPG11-203ENST00000535302 CCL3L1P16619 93 aa10.62□□□□□ -0.71
SPG11-203ENST00000535302 MIR17HGQ75NE6 70 aa10.62□□□□□ -0.71
SPG11-203ENST00000535302 LRTM2Q8N967 370 aa10.62□□□□□ -0.71
SPG11-203ENST00000535302 ELOVL5Q9NYP7 299 aa10.62□□□□□ -0.71
SPG11-203ENST00000535302 AHCTF1Q8WYP5 2266 aa10.62□□□□□ -0.71
SPG11-203ENST00000535302 TNFSF10P50591 281 aa10.62□□□□□ -0.71
SPG11-203ENST00000535302 LAIR2Q6ISS4 152 aa10.62□□□□□ -0.71
SPG11-203ENST00000535302 ASCL2Q99929 193 aa10.62□□□□□ -0.71
SPG11-203ENST00000535302 NAA38Q9BRA0 125 aaKnown RBP10.62□□□□□ -0.71
SPG11-203ENST00000535302 NPIPB9F8W1W9 429 aa10.62□□□□□ -0.71
SPG11-203ENST00000535302 NPIPB7O75200 414 aa10.62□□□□□ -0.71
SPG11-203ENST00000535302 IGLV3-21P80748 117 aaPredicted RBP10.62□□□□□ -0.71
SPG11-203ENST00000535302 DERL1Q9BUN8 251 aa10.62□□□□□ -0.71
SPG11-203ENST00000535302 GGACTQ9BVM4 153 aa10.62□□□□□ -0.71
SPG11-203ENST00000535302 ZNF146Q15072 292 aa10.62□□□□□ -0.71
SPG11-203ENST00000535302 CRPP02741 224 aa10.62□□□□□ -0.71
SPG11-203ENST00000535302 UMODP07911 640 aa10.62□□□□□ -0.71
SPG11-203ENST00000535302 NBEAP1P0C6P0 100 aa10.62□□□□□ -0.71
SPG11-203ENST00000535302 HIST1H4AP62805 103 aaKnown RBP10.62□□□□□ -0.71
SPG11-203ENST00000535302 SRSF4Q08170 494 aaKnown RBP10.62□□□□□ -0.71
SPG11-203ENST00000535302 TMEM14DPA8MWL7 114 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 SDF2L1Q9HCN8 221 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 ANKRD36A6QL64 1941 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 TCRBV4S1A1TA0A5B7 111 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 GZMBP10144 247 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 ZNF585BQ52M93 769 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 ASCL4Q6XD76 172 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 TMEM219Q86XT9 240 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 ARPC1AQ92747 370 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 DOCK10Q96BY6 2186 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 FAM90A10PA6NDY2 464 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 FAM90A18PA6NE21 464 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 FAM90A16PA6NEW6 464 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 FAM90A20PA6NIJ5 464 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 FAM90A8PA6NJQ4 464 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 FAM90A7PA6NKC0 464 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 FAM90A22PA8MWA6 464 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 FAM90A12PA8MX19 464 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 FAM90A5PA8MXJ8 464 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 FAM90A23PA8MXZ1 464 aa10.61□□□□□ -0.71
SPG11-203ENST00000535302 ERVH48-1M5A8F1 160 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms