RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 OR13C7P0DN81 318 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 TAS2R43P59537 309 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 RELQ04864 619 aaPredicted RBP5.77□□□□□ -1.49
CLIP1-206ENST00000535290 WT1-ASQ06250 92 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 ZIK1Q3SY52 487 aaPredicted RBP5.77□□□□□ -1.49
CLIP1-206ENST00000535290 PLAC9Q5JTB6 97 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 C1orf100Q5SVJ3 147 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 TMPRSS11AQ6ZMR5 421 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 OR4S2Q8NH73 311 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 GRAMD2BQ96HH9 432 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 RAB40CQ96S21 281 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 KRTAP4-12Q9BQ66 201 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 GINS4Q9BRT9 223 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 PECRQ9BY49 303 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 KRTAP9-9Q9BYP9 154 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 KRTAP9-4Q9BYQ2 154 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 CLEC2DQ9UHP7 191 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 OAZ3Q9UMX2 235 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 POMPQ9Y244 141 aa5.77□□□□□ -1.49
CLIP1-206ENST00000535290 RBMX2Q9Y388 322 aaKnown RBP5.77□□□□□ -1.49
CLIP1-206ENST00000535290 IGHV3OR16-12A0A075B7B8 117 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 PNMA8CA0A1B0GUJ8 204 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 RPS10-NUDT3A0A1W2PQS6 291 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 SAC3D1A6NKF1 404 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 DIRAS3O95661 229 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 NUDT3O95989 172 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 SERPINE2P07093 398 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 CALB2P22676 271 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 CCL18P55774 89 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 TIMM50Q3ZCQ8 353 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 TOMM20LQ6UXN7 152 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 CBR4Q8N4T8 237 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 STXBP6Q8NFX7 210 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 RHOXF1Q8NHV9 184 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 TCTEX1D2Q8WW35 142 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 GPHA2Q96T91 129 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 SRSF8Q9BRL6 282 aaKnown RBP5.76□□□□□ -1.49
CLIP1-206ENST00000535290 C1QTNF4Q9BXJ3 329 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 QTRT1Q9BXR0 403 aaKnown RBP5.76□□□□□ -1.49
CLIP1-206ENST00000535290 HRASLSQ9HDD0 168 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 FGF20Q9NP95 211 aaPredicted RBP5.76□□□□□ -1.49
CLIP1-206ENST00000535290 BET1LQ9NYM9 111 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 SPATA2Q9UM82 520 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 KCNK7Q9Y2U2 307 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 RFNGQ9Y644 331 aa5.76□□□□□ -1.49
CLIP1-206ENST00000535290 LRP1Q07954 4544 aaKnown RBP5.75□□□□□ -1.49
CLIP1-206ENST00000535290 IGKV1D-8A0A087WSZ0 117 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 TEX48A0A1B0GUV7 120 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 SMIM9A6NGZ8 99 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 UPK2O00526 184 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 CYB5BO43169 146 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 HRASP01112 189 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 CDK1P06493 297 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 EIF4EP06730 217 aaKnown RBP5.75□□□□□ -1.49
CLIP1-206ENST00000535290 FCGR3AP08637 254 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 CD37P11049 281 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 GNB3P16520 340 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 FGF9P31371 208 aaPredicted RBP5.75□□□□□ -1.49
CLIP1-206ENST00000535290 EIF4EBP1Q13541 118 aaPredicted RBP5.75□□□□□ -1.49
CLIP1-206ENST00000535290 INSL4Q14641 139 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 TTC23Q5W5X9 447 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 ZNF773Q6PK81 442 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 GSG1LQ6UXU4 331 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 Q6ZRN7 208 aaPredicted RBP5.75□□□□□ -1.49
CLIP1-206ENST00000535290 SSX7Q7RTT5 188 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 LRRTM1Q86UE6 522 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 ZNF485Q8NCK3 441 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 DCANP1Q8TF63 244 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 Q96MT0 163 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 URM1Q9BTM9 101 aaKnown RBP5.75□□□□□ -1.49
CLIP1-206ENST00000535290 COMMD5Q9GZQ3 224 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 NXF2Q9GZY0 626 aaKnown RBP5.75□□□□□ -1.49
CLIP1-206ENST00000535290 Q9H3A6 140 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 TAS2R8Q9NYW2 309 aa5.75□□□□□ -1.49
CLIP1-206ENST00000535290 YTHDF2Q9Y5A9 579 aaKnown RBP5.75□□□□□ -1.49
CLIP1-206ENST00000535290 F11RQ9Y624 299 aaKnown RBP5.75□□□□□ -1.49
CLIP1-206ENST00000535290 IGKV1D-13A0A0B4J2D9 117 aa5.74□□□□□ -1.49
CLIP1-206ENST00000535290 IGHV3-48P01763 117 aa5.74□□□□□ -1.49
CLIP1-206ENST00000535290 ALPLP05186 524 aa5.74□□□□□ -1.49
CLIP1-206ENST00000535290 IGKV1-13P0DP09 117 aa5.74□□□□□ -1.49
CLIP1-206ENST00000535290 CD36P16671 472 aa5.74□□□□□ -1.49
CLIP1-206ENST00000535290 DCKP27707 260 aa5.74□□□□□ -1.49
CLIP1-206ENST00000535290 DAD1P61803 113 aa5.74□□□□□ -1.49
CLIP1-206ENST00000535290 NUTF2P61970 127 aaKnown RBP5.74□□□□□ -1.49
CLIP1-206ENST00000535290 P2RY14Q15391 338 aa5.74□□□□□ -1.49
CLIP1-206ENST00000535290 USF2Q15853 346 aaPredicted RBP5.74□□□□□ -1.49
CLIP1-206ENST00000535290 SMN1Q16637 294 aaKnown RBP5.74□□□□□ -1.49
CLIP1-206ENST00000535290 TTC32Q5I0X7 151 aa5.74□□□□□ -1.49
CLIP1-206ENST00000535290 PSMG4Q5JS54 123 aa5.74□□□□□ -1.49
CLIP1-206ENST00000535290 APH1BQ8WW43 257 aa5.74□□□□□ -1.49
CLIP1-206ENST00000535290 GINS3Q9BRX5 216 aa5.74□□□□□ -1.49
CLIP1-206ENST00000535290 AP4S1Q9Y587 144 aa5.74□□□□□ -1.49
CLIP1-206ENST00000535290 TEX50A0A1B0GTY4 177 aa5.73□□□□□ -1.49
CLIP1-206ENST00000535290 H3BMM0 161 aa5.73□□□□□ -1.49
CLIP1-206ENST00000535290 IFNA5P01569 189 aa5.73□□□□□ -1.49
CLIP1-206ENST00000535290 HLA-DQB1P01920 261 aa5.73□□□□□ -1.49
CLIP1-206ENST00000535290 TRAPPC2P0DI81 140 aa5.73□□□□□ -1.49
CLIP1-206ENST00000535290 TRAPPC2BP0DI82 140 aa5.73□□□□□ -1.49
CLIP1-206ENST00000535290 NFYAP23511 347 aaPredicted RBP5.73□□□□□ -1.49
CLIP1-206ENST00000535290 FXYD7P58549 80 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms