RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 CDS2O95674 445 aa12.04□□□□□ -0.48
CHMP4A-207ENST00000533523 IGKV1-39P01597 117 aa12.04□□□□□ -0.48
CHMP4A-207ENST00000533523 TRGV3P03979 118 aa12.04□□□□□ -0.48
CHMP4A-207ENST00000533523 IGKV1D-39P04432 117 aa12.04□□□□□ -0.48
CHMP4A-207ENST00000533523 CRYGBP07316 175 aa12.04□□□□□ -0.48
CHMP4A-207ENST00000533523 RRAS2P62070 204 aaPredicted RBP12.04□□□□□ -0.48
CHMP4A-207ENST00000533523 TMEM268Q5VZI3 342 aa12.04□□□□□ -0.48
CHMP4A-207ENST00000533523 LRTM2Q8N967 370 aa12.04□□□□□ -0.48
CHMP4A-207ENST00000533523 GRPEL2Q8TAA5 225 aa12.04□□□□□ -0.48
CHMP4A-207ENST00000533523 TMEM68Q96MH6 324 aa12.04□□□□□ -0.48
CHMP4A-207ENST00000533523 SPATA25Q9BR10 227 aa12.04□□□□□ -0.48
CHMP4A-207ENST00000533523 IGLV1-51P01701 117 aa12.03□□□□□ -0.48
CHMP4A-207ENST00000533523 RPA2P15927 270 aa12.03□□□□□ -0.48
CHMP4A-207ENST00000533523 BCAP31P51572 246 aa12.03□□□□□ -0.48
CHMP4A-207ENST00000533523 FCN2Q15485 313 aa12.03□□□□□ -0.48
CHMP4A-207ENST00000533523 Q8N1Y9 231 aa12.03□□□□□ -0.48
CHMP4A-207ENST00000533523 LFNGQ8NES3 379 aa12.03□□□□□ -0.48
CHMP4A-207ENST00000533523 RBPMSQ93062 196 aaKnown RBP12.03□□□□□ -0.48
CHMP4A-207ENST00000533523 IL22RA2Q969J5 263 aa12.03□□□□□ -0.48
CHMP4A-207ENST00000533523 SLA2Q9H6Q3 261 aa12.03□□□□□ -0.48
CHMP4A-207ENST00000533523 ZNF355PQ9NSJ1 428 aa12.03□□□□□ -0.48
CHMP4A-207ENST00000533523 C19orf73Q9NVV2 129 aa12.03□□□□□ -0.48
CHMP4A-207ENST00000533523 C13orf42A0A1B0GVH6 325 aa12.02□□□□□ -0.49
CHMP4A-207ENST00000533523 DBX1A6NMT0 343 aa12.02□□□□□ -0.49
CHMP4A-207ENST00000533523 SRRM4A7MD48 611 aaKnown RBP12.02□□□□□ -0.49
CHMP4A-207ENST00000533523 H3BUA1 57 aa12.02□□□□□ -0.49
CHMP4A-207ENST00000533523 HPRT1P00492 218 aa12.02□□□□□ -0.49
CHMP4A-207ENST00000533523 HOXB5P09067 269 aa12.02□□□□□ -0.49
CHMP4A-207ENST00000533523 PRSS8Q16651 343 aa12.02□□□□□ -0.49
CHMP4A-207ENST00000533523 LYZL2Q7Z4W2 148 aa12.02□□□□□ -0.49
CHMP4A-207ENST00000533523 SLC35G3Q8N808 338 aa12.02□□□□□ -0.49
CHMP4A-207ENST00000533523 VSTM2AQ8TAG5 236 aa12.02□□□□□ -0.49
CHMP4A-207ENST00000533523 RHOVQ96L33 236 aa12.02□□□□□ -0.49
CHMP4A-207ENST00000533523 PLEKHA2Q9HB19 425 aa12.02□□□□□ -0.49
CHMP4A-207ENST00000533523 COMMD9Q9P000 198 aa12.02□□□□□ -0.49
CHMP4A-207ENST00000533523 MGAT4CQ9UBM8 478 aa12.02□□□□□ -0.49
CHMP4A-207ENST00000533523 DUXBA0A1W2PPF3 345 aa12.01□□□□□ -0.49
CHMP4A-207ENST00000533523 ANKRD34BA5PLL1 514 aa12.01□□□□□ -0.49
CHMP4A-207ENST00000533523 HMX3A6NHT5 357 aa12.01□□□□□ -0.49
CHMP4A-207ENST00000533523 CCSO14618 274 aa12.01□□□□□ -0.49
CHMP4A-207ENST00000533523 GOSR2O14653 212 aa12.01□□□□□ -0.49
CHMP4A-207ENST00000533523 ADAP1O75689 374 aa12.01□□□□□ -0.49
CHMP4A-207ENST00000533523 ACTL6BO94805 426 aa12.01□□□□□ -0.49
CHMP4A-207ENST00000533523 IGKV1-5P01602 117 aa12.01□□□□□ -0.49
CHMP4A-207ENST00000533523 SULT1A3P0DMM9 295 aa12.01□□□□□ -0.49
CHMP4A-207ENST00000533523 SULT1A4P0DMN0 295 aa12.01□□□□□ -0.49
CHMP4A-207ENST00000533523 ZP3P21754 424 aa12.01□□□□□ -0.49
CHMP4A-207ENST00000533523 GGNBP1Q5YKI7 109 aa12.01□□□□□ -0.49
CHMP4A-207ENST00000533523 MMD2Q8IY49 270 aa12.01□□□□□ -0.49
CHMP4A-207ENST00000533523 OR11H7Q8NGC8 314 aa12.01□□□□□ -0.49
CHMP4A-207ENST00000533523 PIGBOS1A0A0B4J2F0 54 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 A8MZ25 164 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 JTBO76095 146 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 ATG12O94817 140 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 HRASP01112 189 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 IFNA21P01568 189 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 SAA1P0DJI8 122 aaPredicted RBP12□□□□□ -0.49
CHMP4A-207ENST00000533523 NQO2P16083 231 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 G6PCP35575 357 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 AKR1C2P52895 323 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 ERVK-16P61578 105 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 DEFA5Q01523 94 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 PJVKQ0ZLH3 352 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 TNXAQ16473 311 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 HAGHQ16775 308 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 GTSCR1Q86UQ5 136 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 RNASE11Q8TAA1 199 aaKnown RBP12□□□□□ -0.49
CHMP4A-207ENST00000533523 SEC22AQ96IW7 307 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 AIFM2Q9BRQ8 373 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 TUBA4BQ9H853 241 aa12□□□□□ -0.49
CHMP4A-207ENST00000533523 RANGRFQ9HD47 186 aaPredicted RBP12□□□□□ -0.49
CHMP4A-207ENST00000533523 A0A0G2JRQ6 117 aa11.99□□□□□ -0.49
CHMP4A-207ENST00000533523 FAM25EA8MYX2 175 aa11.99□□□□□ -0.49
CHMP4A-207ENST00000533523 SIX6O95475 246 aa11.99□□□□□ -0.49
CHMP4A-207ENST00000533523 KRASP01116 189 aa11.99□□□□□ -0.49
CHMP4A-207ENST00000533523 TRAPPC2P0DI81 140 aa11.99□□□□□ -0.49
CHMP4A-207ENST00000533523 TRAPPC2BP0DI82 140 aa11.99□□□□□ -0.49
CHMP4A-207ENST00000533523 HLA-GP17693 338 aa11.99□□□□□ -0.49
CHMP4A-207ENST00000533523 CXCL3P19876 107 aa11.99□□□□□ -0.49
CHMP4A-207ENST00000533523 SSBP2P81877 361 aaPredicted RBP11.99□□□□□ -0.49
CHMP4A-207ENST00000533523 SSX9Q7RTT3 188 aa11.99□□□□□ -0.49
CHMP4A-207ENST00000533523 CHAC2Q8WUX2 184 aa11.99□□□□□ -0.49
CHMP4A-207ENST00000533523 RRNAD1Q96FB5 475 aaKnown RBP11.99□□□□□ -0.49
CHMP4A-207ENST00000533523 RETNQ9HD89 108 aa11.99□□□□□ -0.49
CHMP4A-207ENST00000533523 TMED3Q9Y3Q3 217 aa11.99□□□□□ -0.49
CHMP4A-207ENST00000533523 ABCA13Q86UQ4 5058 aa11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 C5orf51A6NDU8 294 aa11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 MARCH11A6NNE9 402 aa11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 OR2A4O95047 310 aa11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 BRI3O95415 125 aa11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 P0C879 139 aa11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 SYNJ2BPP57105 145 aa11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 POU2AF1Q16633 256 aa11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 NMSQ5H8A3 153 aa11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 VKORC1L1Q8N0U8 176 aa11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 DMBX1Q8NFW5 382 aa11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 OR5T1Q8NG75 326 aa11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 OR9G4Q8NGQ1 327 aa11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 SRSF12Q8WXF0 261 aaKnown RBP11.98□□□□□ -0.49
CHMP4A-207ENST00000533523 LSM10Q969L4 123 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms