RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 SELENOKQ9Y6D0 94 aa12.95□□□□□ -0.34
PPFIA1-222ENST00000532504 NTF3P20783 257 aa12.95□□□□□ -0.34
PPFIA1-222ENST00000532504 ZNF329Q86UD4 541 aa12.95□□□□□ -0.34
PPFIA1-222ENST00000532504 CHAC2Q8WUX2 184 aa12.95□□□□□ -0.34
PPFIA1-222ENST00000532504 SLC35B3Q9H1N7 401 aa12.95□□□□□ -0.34
PPFIA1-222ENST00000532504 TLN1Q9Y490 2541 aaKnown RBP12.94□□□□□ -0.34
PPFIA1-222ENST00000532504 PGPA6NDG6 321 aa12.94□□□□□ -0.34
PPFIA1-222ENST00000532504 HELTA6NFD8 242 aa12.94□□□□□ -0.34
PPFIA1-222ENST00000532504 AMY1AP04745 511 aa12.94□□□□□ -0.34
PPFIA1-222ENST00000532504 RPL30P62888 115 aaKnown RBP12.94□□□□□ -0.34
PPFIA1-222ENST00000532504 RNF138Q8WVD3 245 aa12.94□□□□□ -0.34
PPFIA1-222ENST00000532504 TRAF4Q9BUZ4 470 aaPredicted RBP12.94□□□□□ -0.34
PPFIA1-222ENST00000532504 MINOS1Q5TGZ0 78 aa12.94□□□□□ -0.34
PPFIA1-222ENST00000532504 TMEM88Q6PEY1 159 aa12.94□□□□□ -0.34
PPFIA1-222ENST00000532504 MINOS1-NBL1R4GNA1 71 aa12.94□□□□□ -0.34
PPFIA1-222ENST00000532504 MPTX1A8MV57 137 aa12.94□□□□□ -0.34
PPFIA1-222ENST00000532504 RSPO1Q2MKA7 263 aaPredicted RBP12.94□□□□□ -0.34
PPFIA1-222ENST00000532504 GALNT14Q96FL9 552 aa12.94□□□□□ -0.34
PPFIA1-222ENST00000532504 RPL7P18124 248 aaKnown RBP12.94□□□□□ -0.34
PPFIA1-222ENST00000532504 C9orf62Q8N4C0 152 aa12.94□□□□□ -0.34
PPFIA1-222ENST00000532504 C5orf17Q8NAS9 161 aa12.94□□□□□ -0.34
PPFIA1-222ENST00000532504 LINC00205P59089 165 aa12.93□□□□□ -0.34
PPFIA1-222ENST00000532504 SERF2P84101 59 aa12.93□□□□□ -0.34
PPFIA1-222ENST00000532504 USF2Q15853 346 aaPredicted RBP12.93□□□□□ -0.34
PPFIA1-222ENST00000532504 BUB1B-PAK6H3BSN5 160 aa12.93□□□□□ -0.34
PPFIA1-222ENST00000532504 S100A8P05109 93 aa12.93□□□□□ -0.34
PPFIA1-222ENST00000532504 PRTN3P24158 256 aa12.93□□□□□ -0.34
PPFIA1-222ENST00000532504 OR51G1Q8NGK1 321 aa12.93□□□□□ -0.34
PPFIA1-222ENST00000532504 CD8AP01732 235 aa12.93□□□□□ -0.34
PPFIA1-222ENST00000532504 P01737 135 aa12.93□□□□□ -0.34
PPFIA1-222ENST00000532504 SEC11BP0C7V7 166 aa12.93□□□□□ -0.34
PPFIA1-222ENST00000532504 WDR86Q86TI4 376 aa12.93□□□□□ -0.34
PPFIA1-222ENST00000532504 SGK494Q96LW2 274 aa12.93□□□□□ -0.34
PPFIA1-222ENST00000532504 TXN2Q99757 166 aa12.93□□□□□ -0.34
PPFIA1-222ENST00000532504 NABP2Q9BQ15 211 aa12.93□□□□□ -0.34
PPFIA1-222ENST00000532504 PSMB11A5LHX3 300 aa12.93□□□□□ -0.34
PPFIA1-222ENST00000532504 DDB2Q92466 427 aa12.93□□□□□ -0.34
PPFIA1-222ENST00000532504 TRAV41A0A0B4J266 112 aa12.92□□□□□ -0.34
PPFIA1-222ENST00000532504 SNRPD3P62318 126 aaKnown RBP12.92□□□□□ -0.34
PPFIA1-222ENST00000532504 RAX2Q96IS3 184 aa12.92□□□□□ -0.34
PPFIA1-222ENST00000532504 IGLV3-9A0A075B6K5 115 aa12.92□□□□□ -0.34
PPFIA1-222ENST00000532504 CXCL2P19875 107 aa12.92□□□□□ -0.34
PPFIA1-222ENST00000532504 AGAP20933 346 aa12.92□□□□□ -0.34
PPFIA1-222ENST00000532504 VAX2Q9UIW0 290 aa12.92□□□□□ -0.34
PPFIA1-222ENST00000532504 GATA2P23769 480 aaPredicted RBP12.92□□□□□ -0.34
PPFIA1-222ENST00000532504 KLF2Q9Y5W3 355 aaPredicted RBP12.92□□□□□ -0.34
PPFIA1-222ENST00000532504 NAPSAO96009 420 aa12.92□□□□□ -0.34
PPFIA1-222ENST00000532504 CLLU1Q5K131 121 aa12.92□□□□□ -0.34
PPFIA1-222ENST00000532504 TEX45Q8NA69 505 aa12.92□□□□□ -0.34
PPFIA1-222ENST00000532504 SIAH2O43255 324 aa12.92□□□□□ -0.34
PPFIA1-222ENST00000532504 LHFPL4Q7Z7J7 247 aa12.92□□□□□ -0.34
PPFIA1-222ENST00000532504 C3orf56Q8N813 242 aa12.92□□□□□ -0.34
PPFIA1-222ENST00000532504 OR10W1Q8NGF6 305 aa12.92□□□□□ -0.34
PPFIA1-222ENST00000532504 DNAH12Q6ZR08 3092 aa12.91□□□□□ -0.34
PPFIA1-222ENST00000532504 IGFBP2P18065 325 aa12.91□□□□□ -0.34
PPFIA1-222ENST00000532504 Q5BKY6 102 aa12.91□□□□□ -0.34
PPFIA1-222ENST00000532504 OR9G9P0C7N8 305 aa12.91□□□□□ -0.34
PPFIA1-222ENST00000532504 HIST1H1AQ02539 215 aaPredicted RBP12.91□□□□□ -0.34
PPFIA1-222ENST00000532504 CHD8Q9HCK8 2581 aa12.91□□□□□ -0.34
PPFIA1-222ENST00000532504 CFDP00746 253 aaPredicted RBP12.91□□□□□ -0.34
PPFIA1-222ENST00000532504 GATA4P43694 442 aa12.91□□□□□ -0.34
PPFIA1-222ENST00000532504 RRN3P1Q2M238 152 aa12.91□□□□□ -0.34
PPFIA1-222ENST00000532504 SLC25A48Q6ZT89 311 aaKnown RBP12.91□□□□□ -0.34
PPFIA1-222ENST00000532504 LINC00305Q7Z4B0 112 aa12.91□□□□□ -0.34
PPFIA1-222ENST00000532504 C8orf88P0DMB2 117 aa12.91□□□□□ -0.34
PPFIA1-222ENST00000532504 DEFB113Q30KQ7 82 aa12.91□□□□□ -0.34
PPFIA1-222ENST00000532504 CYP2G1PQ6ZSU1 146 aa12.91□□□□□ -0.34
PPFIA1-222ENST00000532504 ZNF345Q14585 488 aa12.9□□□□□ -0.34
PPFIA1-222ENST00000532504 IGSF23A1L1A6 192 aa12.9□□□□□ -0.34
PPFIA1-222ENST00000532504 C15orf61A6NNL5 157 aa12.9□□□□□ -0.34
PPFIA1-222ENST00000532504 MGPP08493 103 aa12.9□□□□□ -0.34
PPFIA1-222ENST00000532504 DLK1P80370 383 aa12.9□□□□□ -0.34
PPFIA1-222ENST00000532504 AANATQ16613 207 aa12.9□□□□□ -0.34
PPFIA1-222ENST00000532504 LDLRAD4O15165 306 aa12.9□□□□□ -0.34
PPFIA1-222ENST00000532504 PDZD11Q5EBL8 140 aa12.9□□□□□ -0.34
PPFIA1-222ENST00000532504 Q8TCH9 128 aa12.9□□□□□ -0.34
PPFIA1-222ENST00000532504 SH3BGRL3Q9H299 93 aa12.9□□□□□ -0.34
PPFIA1-222ENST00000532504 OR51M1Q9H341 326 aa12.9□□□□□ -0.34
PPFIA1-222ENST00000532504 KLF17Q5JT82 389 aaPredicted RBP12.9□□□□□ -0.35
PPFIA1-222ENST00000532504 RAB24Q969Q5 203 aa12.9□□□□□ -0.35
PPFIA1-222ENST00000532504 YLPM1P49750 1951 aaKnown RBP12.89□□□□□ -0.35
PPFIA1-222ENST00000532504 SCGB1D1O95968 90 aa12.89□□□□□ -0.35
PPFIA1-222ENST00000532504 PPP1R2P9O14990 202 aa12.89□□□□□ -0.35
PPFIA1-222ENST00000532504 GATA3P23771 443 aa12.89□□□□□ -0.35
PPFIA1-222ENST00000532504 PQLC2Q6ZP29 291 aa12.89□□□□□ -0.35
PPFIA1-222ENST00000532504 SONP18583 2426 aaKnown RBP12.89□□□□□ -0.35
PPFIA1-222ENST00000532504 NAT8BQ9UHF3 227 aa12.89□□□□□ -0.35
PPFIA1-222ENST00000532504 TMEM131Q92545 1883 aa12.89□□□□□ -0.35
PPFIA1-222ENST00000532504 IGHV2-70DA0A0C4DH43 119 aa12.89□□□□□ -0.35
PPFIA1-222ENST00000532504 MAS1LP35410 378 aa12.89□□□□□ -0.35
PPFIA1-222ENST00000532504 PEMTQ9UBM1 199 aa12.89□□□□□ -0.35
PPFIA1-222ENST00000532504 PLCE1Q9P212 2302 aa12.88□□□□□ -0.35
PPFIA1-222ENST00000532504 OOSP1A8MZH6 123 aa12.88□□□□□ -0.35
PPFIA1-222ENST00000532504 ATP5IP56385 69 aaPredicted RBP12.88□□□□□ -0.35
PPFIA1-222ENST00000532504 BSXQ3C1V8 233 aa12.88□□□□□ -0.35
PPFIA1-222ENST00000532504 ARL14EPLP0DKL9 152 aa12.88□□□□□ -0.35
PPFIA1-222ENST00000532504 C2orf68Q2NKX9 166 aa12.88□□□□□ -0.35
PPFIA1-222ENST00000532504 SHANK1Q9Y566 2161 aa12.88□□□□□ -0.35
PPFIA1-222ENST00000532504 RAB19A4D1S5 217 aa12.88□□□□□ -0.35
PPFIA1-222ENST00000532504 RBFOX2O43251 390 aaKnown RBP eCLIP12.88□□□□□ -0.354e-8■■■■■ 124.9
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms