RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 TEX48A0A1B0GUV7 120 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 DNASE2O00115 360 aaPredicted RBP5.78□□□□□ -1.48
CD44-232ENST00000531118 RAB27BO00194 218 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 DIRAS3O95661 229 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 MYL12AP19105 171 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 OR2B8PP59922 312 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 RPL30P62888 115 aaKnown RBP5.78□□□□□ -1.48
CD44-232ENST00000531118 RCN1Q15293 331 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 Q56UQ5 140 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 CT83Q5H943 113 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 LCE4AQ5TA78 99 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 SERTAD4-AS1Q5TG53 156 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 LYSMD2Q8IV50 215 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 GDPD1Q8N9F7 314 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 UBAC2Q8NBM4 344 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 ST8SIA2Q92186 375 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 OR10C1Q96KK4 312 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 C17orf77Q96MU5 243 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 KRTAP1-5Q9BYS1 174 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 LPAR5Q9H1C0 372 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 MRPS18AQ9NVS2 196 aaKnown RBP5.78□□□□□ -1.48
CD44-232ENST00000531118 PRELID3BQ9Y3B1 194 aa5.78□□□□□ -1.48
CD44-232ENST00000531118 TMEM189A5PLL7 270 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 ST8SIA3O43173 380 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 CD5P06127 495 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 EIF4EP06730 217 aaKnown RBP5.77□□□□□ -1.49
CD44-232ENST00000531118 FCGR3AP08637 254 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 CD36P16671 472 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 DCKP27707 260 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 ETV1P50549 477 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 EMP1P54849 157 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 QRFPP83859 136 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 RELQ04864 619 aaPredicted RBP5.77□□□□□ -1.49
CD44-232ENST00000531118 TIMM50Q3ZCQ8 353 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 FAM222AQ5U5X8 452 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 UBE2UQ5VVX9 321 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 H1FOOQ8IZA3 346 aaPredicted RBP5.77□□□□□ -1.49
CD44-232ENST00000531118 C8orf59Q8N0T1 100 aaPredicted RBP5.77□□□□□ -1.49
CD44-232ENST00000531118 MAFIPQ8WZ33 124 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 DGCR14Q96DF8 476 aaKnown RBP5.77□□□□□ -1.49
CD44-232ENST00000531118 ARHGAP5-AS1Q96IT6 56 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 SRSF8Q9BRL6 282 aaKnown RBP5.77□□□□□ -1.49
CD44-232ENST00000531118 GINS4Q9BRT9 223 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 NIPSNAP3BQ9BS92 247 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 PECRQ9BY49 303 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 FGF20Q9NP95 211 aaPredicted RBP5.77□□□□□ -1.49
CD44-232ENST00000531118 BET1LQ9NYM9 111 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 PTTG2Q9NZH5 202 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 DKK2Q9UBU2 259 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 RABAC1Q9UI14 185 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 HSF4Q9ULV5 492 aa5.77□□□□□ -1.49
CD44-232ENST00000531118 TRAV14DV4A0A0A6YYC5 116 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 EFCAB10A6NFE3 127 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 KRTAP29-1A8MX34 341 aaPredicted RBP5.76□□□□□ -1.49
CD44-232ENST00000531118 K7EIM0 57 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 CYB5BO43169 146 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 YIF1AO95070 293 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 SMR3BP02814 79 aaPredicted RBP5.76□□□□□ -1.49
CD44-232ENST00000531118 ZNF688P0C7X2 276 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 FGF9P31371 208 aaPredicted RBP5.76□□□□□ -1.49
CD44-232ENST00000531118 SCAND1P57086 179 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 OXA1LQ15070 435 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 TTC32Q5I0X7 151 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 ACTL10Q5JWF8 245 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 C1orf100Q5SVJ3 147 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 SCARB1Q8WTV0 552 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 TCTEX1D2Q8WW35 142 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 ZNF503Q96F45 646 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 TMEM80Q96HE8 168 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 GRAMD2BQ96HH9 432 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 NEU1Q99519 415 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 URM1Q9BTM9 101 aaKnown RBP5.76□□□□□ -1.49
CD44-232ENST00000531118 VCX3BQ9H321 246 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 VSIRQ9H7M9 311 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 BABAM2Q9NXR7 383 aa5.76□□□□□ -1.49
CD44-232ENST00000531118 RBMX2Q9Y388 322 aaKnown RBP5.76□□□□□ -1.49
CD44-232ENST00000531118 IGHV3-66A0A0C4DH42 116 aa5.75□□□□□ -1.49
CD44-232ENST00000531118 PNMA8CA0A1B0GUJ8 204 aa5.75□□□□□ -1.49
CD44-232ENST00000531118 K7EQG2 157 aa5.75□□□□□ -1.49
CD44-232ENST00000531118 CASQ2O14958 399 aaPredicted RBP5.75□□□□□ -1.49
CD44-232ENST00000531118 WBP4O75554 376 aaKnown RBP5.75□□□□□ -1.49
CD44-232ENST00000531118 CDK1P06493 297 aa5.75□□□□□ -1.49
CD44-232ENST00000531118 CTSGP08311 255 aa5.75□□□□□ -1.49
CD44-232ENST00000531118 MAPK3P27361 379 aaPredicted RBP5.75□□□□□ -1.49
CD44-232ENST00000531118 FUSP35637 526 aaKnown RBP eCLIP5.75□□□□□ -1.49
CD44-232ENST00000531118 TMEM50BP56557 158 aa5.75□□□□□ -1.49
CD44-232ENST00000531118 TAS2R43P59537 309 aa5.75□□□□□ -1.49
CD44-232ENST00000531118 RBM48Q5RL73 367 aaKnown RBP5.75□□□□□ -1.49
CD44-232ENST00000531118 OGFRL1Q5TC84 451 aaPredicted RBP5.75□□□□□ -1.49
CD44-232ENST00000531118 SLC25A24Q6NUK1 477 aa5.75□□□□□ -1.49
CD44-232ENST00000531118 ZNF773Q6PK81 442 aa5.75□□□□□ -1.49
CD44-232ENST00000531118 ZNF705AQ6ZN79 300 aaPredicted RBP5.75□□□□□ -1.49
CD44-232ENST00000531118 FAM89BQ8N5H3 189 aa5.75□□□□□ -1.49
CD44-232ENST00000531118 STXBP6Q8NFX7 210 aa5.75□□□□□ -1.49
CD44-232ENST00000531118 APH1BQ8WW43 257 aa5.75□□□□□ -1.49
CD44-232ENST00000531118 GINS3Q9BRX5 216 aa5.75□□□□□ -1.49
CD44-232ENST00000531118 C1QTNF4Q9BXJ3 329 aa5.75□□□□□ -1.49
CD44-232ENST00000531118 QTRT1Q9BXR0 403 aaKnown RBP5.75□□□□□ -1.49
CD44-232ENST00000531118 XCL2Q9UBD3 114 aa5.75□□□□□ -1.49
CD44-232ENST00000531118 DIMT1Q9UNQ2 313 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms