RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 TNFAIP8O95379 198 aa11.75□□□□□ -0.53
CPSF1-205ENST00000531042 ADMP35318 185 aa11.75□□□□□ -0.53
CPSF1-205ENST00000531042 PHLDA2Q53GA4 152 aa11.75□□□□□ -0.53
CPSF1-205ENST00000531042 LPCAT3Q6P1A2 487 aa11.75□□□□□ -0.53
CPSF1-205ENST00000531042 OR5B3Q8NH48 314 aa11.75□□□□□ -0.53
CPSF1-205ENST00000531042 FAM212BQ9NTI7 297 aaPredicted RBP11.75□□□□□ -0.53
CPSF1-205ENST00000531042 TMEM14BQ9NUH8 114 aa11.75□□□□□ -0.53
CPSF1-205ENST00000531042 A6NHS1 94 aa11.74□□□□□ -0.53
CPSF1-205ENST00000531042 C15orf61A6NNL5 157 aa11.74□□□□□ -0.53
CPSF1-205ENST00000531042 K7EMT4 169 aa11.74□□□□□ -0.53
CPSF1-205ENST00000531042 TSPAN5P62079 268 aa11.74□□□□□ -0.53
CPSF1-205ENST00000531042 LAMTOR1Q6IAA8 161 aa11.74□□□□□ -0.53
CPSF1-205ENST00000531042 UBAC2Q8NBM4 344 aa11.74□□□□□ -0.53
CPSF1-205ENST00000531042 CMTM3Q96MX0 182 aa11.74□□□□□ -0.53
CPSF1-205ENST00000531042 TSC22D3Q99576 134 aa11.74□□□□□ -0.53
CPSF1-205ENST00000531042 C20orf24Q9BUV8 137 aa11.74□□□□□ -0.53
CPSF1-205ENST00000531042 COMMD3Q9UBI1 195 aa11.74□□□□□ -0.53
CPSF1-205ENST00000531042 UBQLN2Q9UHD9 624 aa11.74□□□□□ -0.53
CPSF1-205ENST00000531042 BIRC6Q9NR09 4857 aa11.74□□□□□ -0.53
CPSF1-205ENST00000531042 SMIM31A0A1B0GVY4 71 aa11.73□□□□□ -0.53
CPSF1-205ENST00000531042 APOA1P02647 267 aa11.73□□□□□ -0.53
CPSF1-205ENST00000531042 S100GP29377 79 aa11.73□□□□□ -0.53
CPSF1-205ENST00000531042 Q56UQ5 140 aa11.73□□□□□ -0.53
CPSF1-205ENST00000531042 TBC1D26Q86UD7 250 aa11.73□□□□□ -0.53
CPSF1-205ENST00000531042 OR1P1Q8NH06 330 aa11.73□□□□□ -0.53
CPSF1-205ENST00000531042 SEC22AQ96IW7 307 aa11.73□□□□□ -0.53
CPSF1-205ENST00000531042 SCPEP1Q9HB40 452 aa11.73□□□□□ -0.53
CPSF1-205ENST00000531042 IGHV3OR16-8A0A075B7F1 116 aa11.72□□□□□ -0.53
CPSF1-205ENST00000531042 C15orf62A8K5M9 175 aa11.72□□□□□ -0.53
CPSF1-205ENST00000531042 ZNF207O43670 478 aaKnown RBP11.72□□□□□ -0.53
CPSF1-205ENST00000531042 IGKV1-39P01597 117 aa11.72□□□□□ -0.53
CPSF1-205ENST00000531042 IGKV1D-39P04432 117 aa11.72□□□□□ -0.53
CPSF1-205ENST00000531042 CTSGP08311 255 aa11.72□□□□□ -0.53
CPSF1-205ENST00000531042 UCP3P55916 312 aa11.72□□□□□ -0.53
CPSF1-205ENST00000531042 NCS1P62166 190 aa11.72□□□□□ -0.53
CPSF1-205ENST00000531042 WFDC3Q8IUB2 231 aa11.72□□□□□ -0.53
CPSF1-205ENST00000531042 SNX29P2Q8IUI4 249 aa11.72□□□□□ -0.53
CPSF1-205ENST00000531042 ZNF414Q96IQ9 312 aa11.72□□□□□ -0.53
CPSF1-205ENST00000531042 TP53TG1Q9Y2A0 90 aa11.72□□□□□ -0.53
CPSF1-205ENST00000531042 ALMS1Q8TCU4 4167 aa11.72□□□□□ -0.53
CPSF1-205ENST00000531042 ELK1P19419 428 aa11.71□□□□□ -0.53
CPSF1-205ENST00000531042 RCVRNP35243 200 aa11.71□□□□□ -0.53
CPSF1-205ENST00000531042 APOC4P55056 127 aa11.71□□□□□ -0.53
CPSF1-205ENST00000531042 VBP1P61758 197 aa11.71□□□□□ -0.53
CPSF1-205ENST00000531042 ODF3L2Q3SX64 289 aa11.71□□□□□ -0.53
CPSF1-205ENST00000531042 Q6ZWC4 215 aa11.71□□□□□ -0.53
CPSF1-205ENST00000531042 H2BFWTQ7Z2G1 175 aa11.71□□□□□ -0.53
CPSF1-205ENST00000531042 OR4A16Q8NH70 328 aa11.71□□□□□ -0.53
CPSF1-205ENST00000531042 FUNDC2Q9BWH2 189 aa11.71□□□□□ -0.53
CPSF1-205ENST00000531042 MRPS26Q9BYN8 205 aaKnown RBP11.71□□□□□ -0.53
CPSF1-205ENST00000531042 OR4C46A6NHA9 309 aa11.7□□□□□ -0.54
CPSF1-205ENST00000531042 I3L2K1 104 aa11.7□□□□□ -0.54
CPSF1-205ENST00000531042 UBE2CO00762 179 aa11.7□□□□□ -0.54
CPSF1-205ENST00000531042 SPRY2O43597 315 aa11.7□□□□□ -0.54
CPSF1-205ENST00000531042 HPGDSO60760 199 aa11.7□□□□□ -0.54
CPSF1-205ENST00000531042 CTSDP07339 412 aaPredicted RBP11.7□□□□□ -0.54
CPSF1-205ENST00000531042 FCGR2BP31994 310 aaPredicted RBP11.7□□□□□ -0.54
CPSF1-205ENST00000531042 RELQ04864 619 aaPredicted RBP11.7□□□□□ -0.54
CPSF1-205ENST00000531042 ZNF114Q8NC26 417 aa11.7□□□□□ -0.54
CPSF1-205ENST00000531042 SMPXQ9UHP9 88 aa11.7□□□□□ -0.54
CPSF1-205ENST00000531042 KIR2DL5BA0A0G2JN68 375 aa11.69□□□□□ -0.54
CPSF1-205ENST00000531042 KIR2DL5BA0A0G2JPC4 375 aa11.69□□□□□ -0.54
CPSF1-205ENST00000531042 A0A0J9YWU9 116 aa11.69□□□□□ -0.54
CPSF1-205ENST00000531042 NUPL2O15504 423 aaKnown RBP11.69□□□□□ -0.54
CPSF1-205ENST00000531042 SMIM18P0DKX4 95 aa11.69□□□□□ -0.54
CPSF1-205ENST00000531042 BMI1P35226 326 aa11.69□□□□□ -0.54
CPSF1-205ENST00000531042 MFAP4P55083 255 aa11.69□□□□□ -0.54
CPSF1-205ENST00000531042 HSPE1P61604 102 aaKnown RBP11.69□□□□□ -0.54
CPSF1-205ENST00000531042 PRCDQ00LT1 54 aa11.69□□□□□ -0.54
CPSF1-205ENST00000531042 TNFRSF9Q07011 255 aa11.69□□□□□ -0.54
CPSF1-205ENST00000531042 DEFB135Q30KP9 77 aa11.69□□□□□ -0.54
CPSF1-205ENST00000531042 KIR2DL5AQ8N109 375 aa11.69□□□□□ -0.54
CPSF1-205ENST00000531042 KIR2DL5BQ8NHK3 375 aa11.69□□□□□ -0.54
CPSF1-205ENST00000531042 MRGPRFQ96AM1 343 aa11.69□□□□□ -0.54
CPSF1-205ENST00000531042 MISP3Q96FF7 219 aa11.69□□□□□ -0.54
CPSF1-205ENST00000531042 OR10C1Q96KK4 312 aa11.69□□□□□ -0.54
CPSF1-205ENST00000531042 TXN2Q99757 166 aa11.69□□□□□ -0.54
CPSF1-205ENST00000531042 IGHV7-4-1A0A0J9YVY3 117 aa11.68□□□□□ -0.54
CPSF1-205ENST00000531042 M0QYG6 137 aa11.68□□□□□ -0.54
CPSF1-205ENST00000531042 CHEK1O14757 476 aa11.68□□□□□ -0.54
CPSF1-205ENST00000531042 MT-CO2P00403 227 aa11.68□□□□□ -0.54
CPSF1-205ENST00000531042 EWSR1Q01844 656 aaKnown RBP eCLIP11.68□□□□□ -0.544e-12■■■□□ 17.6
CPSF1-205ENST00000531042 LYG2Q86SG7 212 aa11.68□□□□□ -0.54
CPSF1-205ENST00000531042 STPG3Q8N7X2 389 aa11.68□□□□□ -0.54
CPSF1-205ENST00000531042 TMEM116Q8NCL8 245 aa11.68□□□□□ -0.54
CPSF1-205ENST00000531042 GALNT14Q96FL9 552 aa11.68□□□□□ -0.54
CPSF1-205ENST00000531042 RNF2Q99496 336 aa11.68□□□□□ -0.54
CPSF1-205ENST00000531042 RHPN1-AS1Q9BWJ2 59 aa11.68□□□□□ -0.54
CPSF1-205ENST00000531042 NXF2Q9GZY0 626 aaKnown RBP11.68□□□□□ -0.54
CPSF1-205ENST00000531042 NDUFA13Q9P0J0 144 aa11.68□□□□□ -0.54
CPSF1-205ENST00000531042 YIF1AO95070 293 aa11.67□□□□□ -0.54
CPSF1-205ENST00000531042 IGHV3-48P01763 117 aa11.67□□□□□ -0.54
CPSF1-205ENST00000531042 RPL35AP18077 110 aaKnown RBP11.67□□□□□ -0.54
CPSF1-205ENST00000531042 RORCP51449 518 aa11.67□□□□□ -0.54
CPSF1-205ENST00000531042 RND3P61587 244 aa11.67□□□□□ -0.54
CPSF1-205ENST00000531042 ERHP84090 104 aaKnown RBP11.67□□□□□ -0.54
CPSF1-205ENST00000531042 RNF183Q96D59 192 aa11.67□□□□□ -0.54
CPSF1-205ENST00000531042 ZNF486Q96H40 463 aaPredicted RBP11.67□□□□□ -0.54
CPSF1-205ENST00000531042 MAP6D1Q9H9H5 199 aa11.67□□□□□ -0.54
CPSF1-205ENST00000531042 IGHV3-49A0A0A0MS15 119 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms