RNA–Protein interactions for RNA: ENST00000530618.1

SSBP3-213, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-213ENST00000530618 TNFRSF9Q07011 255 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 ECSCRQ19T08 205 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 ANKRD55Q3KP44 614 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 NMSQ5H8A3 153 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 KHDC1LQ5JSQ8 128 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 LDLRAD2Q5SZI1 272 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 UTF1Q5T230 341 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 LYZL2Q7Z4W2 148 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 S100A7AQ86SG5 101 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 FAM223AQ8IWN6 122 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 VKORC1L1Q8N0U8 176 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 INO80EQ8NBZ0 244 aaPredicted RBP3.79□□□□□ -1.8
SSBP3-213ENST00000530618 OR52B4Q8NGK2 314 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 DTD1Q8TEA8 209 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 C5orf30Q96GV9 206 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 CXorf58Q96LI9 332 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 SLC25A31Q9H0C2 315 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 C16orf95Q9H693 158 aa3.79□□□□□ -1.8
SSBP3-213ENST00000530618 PAIP2BQ9ULR5 123 aaKnown RBP3.79□□□□□ -1.8
SSBP3-213ENST00000530618 STRAPQ9Y3F4 350 aaKnown RBP3.79□□□□□ -1.8
SSBP3-213ENST00000530618 IGHV7-81A0A0B4J1V7 117 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 CLPSL1A2RUU4 121 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 MSGN1A6NI15 193 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 DBX1A6NMT0 343 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 SRRM4A7MD48 611 aaKnown RBP3.78□□□□□ -1.8
SSBP3-213ENST00000530618 NPIPB5A8MRT5 1133 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 E5RGE8 158 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 INS-IGF2F8WCM5 200 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 ATP6V0E1O15342 81 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 SYNGR2O43760 224 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 CHST1O43916 411 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 ADAP1O75689 374 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 IGKV1-5P01602 117 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 IGLV2-23P01705 113 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 IFNA4P05014 189 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 CRYGBP07316 175 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 ELANEP08246 267 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 OR13C7P0DN81 318 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 NPY1RP25929 384 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 PAX6P26367 422 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 CNTFRP26992 372 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 PSMB6P28072 239 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 CAV2P51636 162 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 CRIP2P52943 208 aaPredicted RBP3.78□□□□□ -1.8
SSBP3-213ENST00000530618 PROK1P58294 105 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 BAXQ07812 192 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 FOXE3Q13461 319 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 RAB31Q13636 194 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 SLC25A24Q6NUK1 477 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 AKAP14Q86UN6 197 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 Q8N2B8 174 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 STPG2Q8N412 459 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 ZBTB8BQ8NAP8 495 aaPredicted RBP3.78□□□□□ -1.8
SSBP3-213ENST00000530618 SLC24A4Q8NFF2 622 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 OR10P1Q8NGE3 313 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 OR1P1Q8NH06 330 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 FAM110DQ8TAY7 271 aaPredicted RBP3.78□□□□□ -1.8
SSBP3-213ENST00000530618 PIFOQ8TCI5 191 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 RNASEH2CQ8TDP1 164 aaKnown RBP3.78□□□□□ -1.8
SSBP3-213ENST00000530618 EEF1AKMT3Q96AZ1 226 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 PINX1Q96BK5 328 aaKnown RBP3.78□□□□□ -1.8
SSBP3-213ENST00000530618 GPR146Q96CH1 333 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 USMG5Q96IX5 58 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 ZNF436Q9C0F3 470 aaPredicted RBP3.78□□□□□ -1.8
SSBP3-213ENST00000530618 NDUFA4L2Q9NRX3 87 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 PLSCR3Q9NRY6 295 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 PSENENQ9NZ42 101 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 HSPB7Q9UBY9 170 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 PFDN2Q9UHV9 154 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 RNF24Q9Y225 148 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 NSG2Q9Y328 171 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 LSM5Q9Y4Y9 91 aaKnown RBP3.78□□□□□ -1.8
SSBP3-213ENST00000530618 RNF114Q9Y508 228 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 WSB1Q9Y6I7 421 aa3.78□□□□□ -1.8
SSBP3-213ENST00000530618 TRBV7-1A0A0A6YYK4 115 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 A0A0B4J293 547 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 TEX50A0A1B0GTY4 177 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 HMX3A6NHT5 357 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 NUDT19A8MXV4 375 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 K7EPK0 472 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 CCSO14618 274 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 SSSCA1O60232 199 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 PFDN1O60925 122 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 TSC22D2O75157 780 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 FBXO24O75426 580 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 CCNKO75909 580 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 DFFBO76075 338 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 BRI3O95415 125 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 TSPAN15O95858 294 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 IGKV1-39P01597 117 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 IGKV1D-39P04432 117 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 P0C879 139 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 PF4V1P10720 104 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 SLC25A4P12235 298 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 BMI1P35226 326 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 OPRK1P41145 380 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 NPBWR1P48145 328 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 AP2S1P53680 142 aaPredicted RBP3.77□□□□□ -1.81
SSBP3-213ENST00000530618 LINC00205P59089 165 aa3.77□□□□□ -1.81
SSBP3-213ENST00000530618 TPPP2P59282 170 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms