RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 DIRC3C9JPN6 131 aa9.53□□□□□ -0.88
USP35-207ENST00000530546 RPL39P5Q59GN2 51 aa9.53□□□□□ -0.88
USP35-207ENST00000530546 TMEM108Q6UXF1 575 aa9.53□□□□□ -0.88
USP35-207ENST00000530546 HAPLN4Q86UW8 402 aa9.53□□□□□ -0.88
USP35-207ENST00000530546 SIGLECL1Q8N7X8 197 aa9.53□□□□□ -0.88
USP35-207ENST00000530546 TAF15Q92804 592 aaKnown RBP eCLIP9.53□□□□□ -0.88
USP35-207ENST00000530546 CCL13Q99616 98 aa9.53□□□□□ -0.88
USP35-207ENST00000530546 RNF7Q9UBF6 113 aa9.53□□□□□ -0.88
USP35-207ENST00000530546 TRAV30A0A087WSZ9 112 aa9.53□□□□□ -0.88
USP35-207ENST00000530546 M0R1X1 148 aa9.53□□□□□ -0.88
USP35-207ENST00000530546 FCGR3BO75015 233 aa9.53□□□□□ -0.88
USP35-207ENST00000530546 ADH4P08319 380 aa9.53□□□□□ -0.88
USP35-207ENST00000530546 EIF4EBP1Q13541 118 aaPredicted RBP9.53□□□□□ -0.88
USP35-207ENST00000530546 H2BFWTQ7Z2G1 175 aa9.53□□□□□ -0.88
USP35-207ENST00000530546 ZDHHC16Q969W1 377 aa9.53□□□□□ -0.88
USP35-207ENST00000530546 SEPSECSQ9HD40 501 aaKnown RBP9.53□□□□□ -0.88
USP35-207ENST00000530546 CDC42EP3Q9UKI2 254 aa9.53□□□□□ -0.88
USP35-207ENST00000530546 SPTA1P02549 2419 aa9.53□□□□□ -0.88
USP35-207ENST00000530546 TLN1Q9Y490 2541 aaKnown RBP9.53□□□□□ -0.88
USP35-207ENST00000530546 SMG1Q96Q15 3661 aaKnown RBP9.52□□□□□ -0.88
USP35-207ENST00000530546 DPRXA6NFQ7 191 aa9.52□□□□□ -0.88
USP35-207ENST00000530546 FAM90A1Q86YD7 464 aa9.52□□□□□ -0.88
USP35-207ENST00000530546 Q8N976 141 aa9.52□□□□□ -0.88
USP35-207ENST00000530546 SGMS2Q8NHU3 365 aa9.52□□□□□ -0.88
USP35-207ENST00000530546 VPS25Q9BRG1 176 aa9.52□□□□□ -0.88
USP35-207ENST00000530546 CALYQ9NYX4 217 aa9.52□□□□□ -0.88
USP35-207ENST00000530546 PPIAL4AQ9Y536 164 aa9.52□□□□□ -0.88
USP35-207ENST00000530546 PKDREJQ9NTG1 2253 aa9.52□□□□□ -0.89
USP35-207ENST00000530546 PDE6DO43924 150 aa9.52□□□□□ -0.89
USP35-207ENST00000530546 CLDN14O95500 239 aa9.52□□□□□ -0.89
USP35-207ENST00000530546 LHBP01229 141 aa9.52□□□□□ -0.89
USP35-207ENST00000530546 TNFSF4P23510 183 aa9.52□□□□□ -0.89
USP35-207ENST00000530546 CFHR2P36980 270 aa9.52□□□□□ -0.89
USP35-207ENST00000530546 HTD2P86397 168 aa9.52□□□□□ -0.89
USP35-207ENST00000530546 BSPH1Q075Z2 132 aa9.52□□□□□ -0.89
USP35-207ENST00000530546 BAGE3Q86Y29 109 aa9.52□□□□□ -0.89
USP35-207ENST00000530546 BAGE2Q86Y30 109 aa9.52□□□□□ -0.89
USP35-207ENST00000530546 FAM216BQ8N7L0 139 aa9.52□□□□□ -0.89
USP35-207ENST00000530546 TCTEX1D1Q8N7M0 179 aa9.52□□□□□ -0.89
USP35-207ENST00000530546 OR5B3Q8NH48 314 aa9.52□□□□□ -0.89
USP35-207ENST00000530546 SLC35D1Q9NTN3 355 aa9.52□□□□□ -0.89
USP35-207ENST00000530546 PTPRQQ9UMZ3 2332 aa9.52□□□□□ -0.89
USP35-207ENST00000530546 DOCK11Q5JSL3 2073 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 CBY3A6NI87 242 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 LRRC30A6NM36 301 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 PROP1O75360 226 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 ZNF134P52741 427 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 C3orf36Q3SXR2 165 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 TRAT1Q6PIZ9 186 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 VKORC1L1Q8N0U8 176 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 CSTL1Q9H114 145 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.51□□□□□ -0.89
USP35-207ENST00000530546 FBXL7Q9UJT9 491 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 UBE2L5PA0A1B0GUS4 154 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 K7ENP7 123 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 ZG16O60844 167 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 IGKV1D-33P01593 117 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 IGKV1-33P01594 117 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 PLA2G5P39877 138 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 RPL19P84098 196 aaKnown RBP9.51□□□□□ -0.89
USP35-207ENST00000530546 FFAR4Q5NUL3 377 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 SFRP2Q96HF1 295 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 OR4C12Q96R67 309 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 HSD17B10Q99714 261 aaKnown RBP9.51□□□□□ -0.89
USP35-207ENST00000530546 IL19Q9UHD0 177 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 IGF2RP11717 2491 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 ADGRG4Q8IZF6 3080 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 GPX1P07203 203 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 THBDP07204 575 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 SLC38A11Q08AI6 406 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 TCF23Q7RTU1 214 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 PNKDQ8N490 385 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 JPT1Q9UK76 154 aa9.51□□□□□ -0.89
USP35-207ENST00000530546 IGHV1-69-2A0A0G2JMI3 117 aa9.5□□□□□ -0.89
USP35-207ENST00000530546 C11orf94C9JXX5 98 aa9.5□□□□□ -0.89
USP35-207ENST00000530546 DUTP33316 252 aaKnown RBP9.5□□□□□ -0.89
USP35-207ENST00000530546 KRTDAPP60985 99 aa9.5□□□□□ -0.89
USP35-207ENST00000530546 OR5T1Q8NG75 326 aa9.5□□□□□ -0.89
USP35-207ENST00000530546 MRPL18Q9H0U6 180 aaKnown RBP9.5□□□□□ -0.89
USP35-207ENST00000530546 SLC25A22Q9H936 323 aa9.5□□□□□ -0.89
USP35-207ENST00000530546 TRBV9A0A0B4J1U6 114 aa9.5□□□□□ -0.89
USP35-207ENST00000530546 MDFIC2A0A1B0GVS7 189 aa9.5□□□□□ -0.89
USP35-207ENST00000530546 PAGE4O60829 102 aa9.5□□□□□ -0.89
USP35-207ENST00000530546 ZNF253O75346 499 aa9.5□□□□□ -0.89
USP35-207ENST00000530546 REG1AP05451 166 aa9.5□□□□□ -0.89
USP35-207ENST00000530546 TSPOP30536 169 aa9.5□□□□□ -0.89
USP35-207ENST00000530546 BMI1P35226 326 aa9.5□□□□□ -0.89
USP35-207ENST00000530546 LOXL3P58215 753 aa9.5□□□□□ -0.89
USP35-207ENST00000530546 ADIPOQQ15848 244 aa9.5□□□□□ -0.89
USP35-207ENST00000530546 UNQ5815/PRO19632Q6UWF5 114 aa9.5□□□□□ -0.89
USP35-207ENST00000530546 DSCAMO60469 2012 aa9.5□□□□□ -0.89
USP35-207ENST00000530546 SAA2-SAA4A0A096LPE2 208 aa9.49□□□□□ -0.89
USP35-207ENST00000530546 TRGV8A0A0C4DH27 118 aa9.49□□□□□ -0.89
USP35-207ENST00000530546 RAB29O14966 203 aa9.49□□□□□ -0.89
USP35-207ENST00000530546 P0C879 139 aa9.49□□□□□ -0.89
USP35-207ENST00000530546 GATA4P43694 442 aa9.49□□□□□ -0.89
USP35-207ENST00000530546 C17orf58Q2M2W7 97 aa9.49□□□□□ -0.89
USP35-207ENST00000530546 OR10G9Q8NGN4 311 aa9.49□□□□□ -0.89
USP35-207ENST00000530546 OR10G7Q8NGN6 311 aa9.49□□□□□ -0.89
USP35-207ENST00000530546 GAFA1Q96PS6 74 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms