RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 CGB1A6NKQ9 187 aa11.48□□□□□ -0.57
TTC39A-216ENST00000530004 ACTL6BO94805 426 aa11.48□□□□□ -0.57
TTC39A-216ENST00000530004 SCAF4O95104 1147 aaKnown RBP11.48□□□□□ -0.57
TTC39A-216ENST00000530004 SEC11BP0C7V7 166 aa11.48□□□□□ -0.57
TTC39A-216ENST00000530004 SPP1P10451 314 aa11.48□□□□□ -0.57
TTC39A-216ENST00000530004 ATP6V0CP27449 155 aa11.48□□□□□ -0.57
TTC39A-216ENST00000530004 CHRNA7P36544 502 aa11.48□□□□□ -0.57
TTC39A-216ENST00000530004 RAB11AP62491 216 aa11.48□□□□□ -0.57
TTC39A-216ENST00000530004 TNXAQ16473 311 aa11.48□□□□□ -0.57
TTC39A-216ENST00000530004 ATP6V1FQ16864 119 aa11.48□□□□□ -0.57
TTC39A-216ENST00000530004 TUSC1Q2TAM9 212 aa11.48□□□□□ -0.57
TTC39A-216ENST00000530004 ETV3LQ6ZN32 361 aa11.48□□□□□ -0.57
TTC39A-216ENST00000530004 RNF141Q8WVD5 230 aa11.48□□□□□ -0.57
TTC39A-216ENST00000530004 UBE2L5PA0A1B0GUS4 154 aa11.47□□□□□ -0.57
TTC39A-216ENST00000530004 MDFIC2A0A1B0GVS7 189 aa11.47□□□□□ -0.57
TTC39A-216ENST00000530004 NBR2O15453 112 aa11.47□□□□□ -0.57
TTC39A-216ENST00000530004 CRLF1O75462 422 aa11.47□□□□□ -0.57
TTC39A-216ENST00000530004 CA2P00918 260 aa11.47□□□□□ -0.57
TTC39A-216ENST00000530004 IFNA4P05014 189 aa11.47□□□□□ -0.57
TTC39A-216ENST00000530004 GNB1P62873 340 aa11.47□□□□□ -0.57
TTC39A-216ENST00000530004 RUNX1Q01196 453 aa11.47□□□□□ -0.57
TTC39A-216ENST00000530004 NPBQ8NG41 125 aa11.47□□□□□ -0.57
TTC39A-216ENST00000530004 SCGB1C1Q8TD33 95 aa11.47□□□□□ -0.57
TTC39A-216ENST00000530004 CXorf58Q96LI9 332 aa11.47□□□□□ -0.57
TTC39A-216ENST00000530004 ZNF48Q96MX3 618 aaPredicted RBP11.47□□□□□ -0.57
TTC39A-216ENST00000530004 TMEM147Q9BVK8 224 aa11.47□□□□□ -0.57
TTC39A-216ENST00000530004 PLA2G2EQ9NZK7 142 aa11.47□□□□□ -0.57
TTC39A-216ENST00000530004 KIAA1456Q9P272 454 aa11.47□□□□□ -0.57
TTC39A-216ENST00000530004 A0A1B0GW64 132 aa11.46□□□□□ -0.57
TTC39A-216ENST00000530004 LINC00862A6NCI5 91 aa11.46□□□□□ -0.57
TTC39A-216ENST00000530004 NDUFA3O95167 84 aa11.46□□□□□ -0.57
TTC39A-216ENST00000530004 FAM157CP0CG43 387 aa11.46□□□□□ -0.57
TTC39A-216ENST00000530004 BRS3P32247 399 aa11.46□□□□□ -0.57
TTC39A-216ENST00000530004 MAS1LP35410 378 aa11.46□□□□□ -0.57
TTC39A-216ENST00000530004 RPL27AP46776 148 aaKnown RBP11.46□□□□□ -0.57
TTC39A-216ENST00000530004 COMPP49747 757 aaPredicted RBP11.46□□□□□ -0.57
TTC39A-216ENST00000530004 SULT1A2P50226 295 aa11.46□□□□□ -0.57
TTC39A-216ENST00000530004 ERHP84090 104 aaKnown RBP11.46□□□□□ -0.57
TTC39A-216ENST00000530004 SCGB2A2Q13296 93 aa11.46□□□□□ -0.57
TTC39A-216ENST00000530004 EBI3Q14213 229 aa11.46□□□□□ -0.57
TTC39A-216ENST00000530004 LRRC20Q8TCA0 184 aa11.46□□□□□ -0.57
TTC39A-216ENST00000530004 PRDM13Q9H4Q3 707 aa11.46□□□□□ -0.57
TTC39A-216ENST00000530004 UQCC1Q9NVA1 299 aa11.46□□□□□ -0.57
TTC39A-216ENST00000530004 RFNGQ9Y644 331 aa11.46□□□□□ -0.57
TTC39A-216ENST00000530004 INS-IGF2F8WCM5 200 aa11.46□□□□□ -0.58
TTC39A-216ENST00000530004 FCN1O00602 326 aa11.46□□□□□ -0.58
TTC39A-216ENST00000530004 FGF16O43320 207 aa11.46□□□□□ -0.58
TTC39A-216ENST00000530004 FAM106CPP0CH98 169 aa11.46□□□□□ -0.58
TTC39A-216ENST00000530004 TMEM11P17152 192 aa11.46□□□□□ -0.58
TTC39A-216ENST00000530004 LRRC75BQ2VPJ9 315 aa11.46□□□□□ -0.58
TTC39A-216ENST00000530004 Q8N6K4 173 aa11.46□□□□□ -0.58
TTC39A-216ENST00000530004 GNPNAT1Q96EK6 184 aaPredicted RBP11.46□□□□□ -0.58
TTC39A-216ENST00000530004 WDR61Q9GZS3 305 aaKnown RBP11.46□□□□□ -0.58
TTC39A-216ENST00000530004 FN1P02751 2386 aaKnown RBP11.46□□□□□ -0.58
TTC39A-216ENST00000530004 ZNF705EA8MWA4 302 aaPredicted RBP11.45□□□□□ -0.58
TTC39A-216ENST00000530004 PRSS46E5RG02 174 aa11.45□□□□□ -0.58
TTC39A-216ENST00000530004 SNCAP37840 140 aa11.45□□□□□ -0.58
TTC39A-216ENST00000530004 WT1-ASQ06250 92 aa11.45□□□□□ -0.58
TTC39A-216ENST00000530004 VWC2Q2TAL6 325 aa11.45□□□□□ -0.58
TTC39A-216ENST00000530004 BSXQ3C1V8 233 aa11.45□□□□□ -0.58
TTC39A-216ENST00000530004 TMEM182Q6ZP80 229 aaPredicted RBP11.45□□□□□ -0.58
TTC39A-216ENST00000530004 OR2G3Q8NGZ4 309 aa11.45□□□□□ -0.58
TTC39A-216ENST00000530004 PARD6GQ9BYG4 376 aaPredicted RBP11.45□□□□□ -0.58
TTC39A-216ENST00000530004 TNCP24821 2201 aa11.44□□□□□ -0.58
TTC39A-216ENST00000530004 NCBP2LA6PVI3 153 aaKnown RBP11.44□□□□□ -0.58
TTC39A-216ENST00000530004 OR13C7P0DN81 318 aa11.44□□□□□ -0.58
TTC39A-216ENST00000530004 RNASE2P10153 161 aaKnown RBP11.44□□□□□ -0.58
TTC39A-216ENST00000530004 ATP5IP56385 69 aaPredicted RBP11.44□□□□□ -0.58
TTC39A-216ENST00000530004 SSBP2P81877 361 aaPredicted RBP11.44□□□□□ -0.58
TTC39A-216ENST00000530004 AANATQ16613 207 aa11.44□□□□□ -0.58
TTC39A-216ENST00000530004 C5orf64Q2M2E5 130 aa11.44□□□□□ -0.58
TTC39A-216ENST00000530004 C2orf83Q53S99 150 aa11.44□□□□□ -0.58
TTC39A-216ENST00000530004 Q6YL49 198 aa11.44□□□□□ -0.58
TTC39A-216ENST00000530004 SIGLECL1Q8N7X8 197 aa11.44□□□□□ -0.58
TTC39A-216ENST00000530004 TAF15Q92804 592 aaKnown RBP eCLIP11.44□□□□□ -0.58
TTC39A-216ENST00000530004 SSX3Q99909 188 aa11.44□□□□□ -0.58
TTC39A-216ENST00000530004 RSG1Q9BU20 258 aa11.44□□□□□ -0.58
TTC39A-216ENST00000530004 MTORP42345 2549 aa11.44□□□□□ -0.58
TTC39A-216ENST00000530004 COMMD7Q86VX2 200 aa11.44□□□□□ -0.58
TTC39A-216ENST00000530004 GGACTQ9BVM4 153 aa11.44□□□□□ -0.58
TTC39A-216ENST00000530004 ANK3Q12955 4377 aaKnown RBP11.43□□□□□ -0.58
TTC39A-216ENST00000530004 IGLC7A0M8Q6 106 aa11.43□□□□□ -0.58
TTC39A-216ENST00000530004 SMCO3A2RU48 225 aa11.43□□□□□ -0.58
TTC39A-216ENST00000530004 CNIH1O95406 144 aa11.43□□□□□ -0.58
TTC39A-216ENST00000530004 REG1AP05451 166 aa11.43□□□□□ -0.58
TTC39A-216ENST00000530004 FGF7P21781 194 aa11.43□□□□□ -0.58
TTC39A-216ENST00000530004 IER3P46695 156 aa11.43□□□□□ -0.58
TTC39A-216ENST00000530004 DLK1P80370 383 aa11.43□□□□□ -0.58
TTC39A-216ENST00000530004 MRPL41Q8IXM3 137 aaKnown RBP11.43□□□□□ -0.58
TTC39A-216ENST00000530004 PIFOQ8TCI5 191 aa11.43□□□□□ -0.58
TTC39A-216ENST00000530004 SRSF12Q8WXF0 261 aaKnown RBP11.43□□□□□ -0.58
TTC39A-216ENST00000530004 PFDN2Q9UHV9 154 aa11.43□□□□□ -0.58
TTC39A-216ENST00000530004 TEX22C9J3V5 150 aa11.42□□□□□ -0.58
TTC39A-216ENST00000530004 TEX46H3BTG2 121 aa11.42□□□□□ -0.58
TTC39A-216ENST00000530004 PRH1P02810 166 aa11.42□□□□□ -0.58
TTC39A-216ENST00000530004 APELAP0DMC3 54 aa11.42□□□□□ -0.58
TTC39A-216ENST00000530004 RBMS3Q6XE24 437 aaKnown RBP11.42□□□□□ -0.58
TTC39A-216ENST00000530004 SAT2Q96F10 170 aaPredicted RBP11.42□□□□□ -0.58
TTC39A-216ENST00000530004 P2RX4Q99571 388 aa11.42□□□□□ -0.58
TTC39A-216ENST00000530004 C1RLQ9NZP8 487 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms