RNA–Protein interactions for RNA: ENST00000529637.5

USP48-213, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-213ENST00000529637 ABHD12Q8N2K0 398 aa11.71□□□□□ -0.54
USP48-213ENST00000529637 OR4F17Q8NGA8 305 aa11.71□□□□□ -0.54
USP48-213ENST00000529637 ST6GALNAC6Q969X2 333 aa11.71□□□□□ -0.54
USP48-213ENST00000529637 COL27A1Q8IZC6 1860 aaPredicted RBP11.71□□□□□ -0.54
USP48-213ENST00000529637 OTOGLQ3ZCN5 2332 aa11.7□□□□□ -0.54
USP48-213ENST00000529637 IGHV2-70DA0A0C4DH43 119 aa11.7□□□□□ -0.54
USP48-213ENST00000529637 AHRRA9YTQ3 701 aa11.7□□□□□ -0.54
USP48-213ENST00000529637 SPINT2O43291 252 aa11.7□□□□□ -0.54
USP48-213ENST00000529637 AARDQ4LEZ3 155 aa11.7□□□□□ -0.54
USP48-213ENST00000529637 PLA2G2CQ5R387 149 aa11.7□□□□□ -0.54
USP48-213ENST00000529637 PQLC2Q6ZP29 291 aa11.7□□□□□ -0.54
USP48-213ENST00000529637 CLCF1Q9UBD9 225 aa11.7□□□□□ -0.54
USP48-213ENST00000529637 TET2Q6N021 2002 aaPredicted RBP11.7□□□□□ -0.54
USP48-213ENST00000529637 TPRP12270 2363 aaKnown RBP11.7□□□□□ -0.54
USP48-213ENST00000529637 SPAARA0A1B0GVQ0 90 aa11.7□□□□□ -0.54
USP48-213ENST00000529637 A8MXE2 369 aa11.7□□□□□ -0.54
USP48-213ENST00000529637 FCGR3BO75015 233 aa11.7□□□□□ -0.54
USP48-213ENST00000529637 CX3CL1P78423 397 aa11.7□□□□□ -0.54
USP48-213ENST00000529637 CENPWQ5EE01 88 aa11.7□□□□□ -0.54
USP48-213ENST00000529637 BET1LQ9NYM9 111 aa11.7□□□□□ -0.54
USP48-213ENST00000529637 TRAV9-1A0A075B6T8 112 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 IGHV3OR15-7A0A075B7D8 119 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 CBY3A6NI87 242 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 RAB29O14966 203 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 IGLL1P15814 213 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 Q56UQ5 140 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 OR10J3Q5JRS4 329 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 SLC35E4Q6ICL7 350 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 SAA2-SAA4A0A096LPE2 208 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 IGHV2-26A0A0B4J1V2 119 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 CRYBB3P26998 211 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 OPRK1P41145 380 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 KIR2DL2P43627 348 aaPredicted RBP11.69□□□□□ -0.54
USP48-213ENST00000529637 GPR12P47775 334 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 SLAQ13239 276 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 SPATA12Q7Z6I5 190 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 KIR3DL3Q8N743 410 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 TCTEX1D1Q8N7M0 179 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 DEFB124Q8NES8 71 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 NEUROG1Q92886 237 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 SLC35D1Q9NTN3 355 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 CDC42EP3Q9UKI2 254 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 MMP23AO75900 390 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 ACTL6BO94805 426 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 EFNB3Q15768 340 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 EBLN2Q6P2I7 272 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 C11orf53Q8IXP5 236 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 ZBTB34Q8NCN2 500 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 OR4P4Q8NGL7 312 aa11.69□□□□□ -0.54
USP48-213ENST00000529637 TNXAQ16473 311 aa11.68□□□□□ -0.54
USP48-213ENST00000529637 MORN2Q502X0 79 aa11.68□□□□□ -0.54
USP48-213ENST00000529637 PRAMEF5Q5TYX0 476 aa11.68□□□□□ -0.54
USP48-213ENST00000529637 ZNF439Q8NDP4 499 aa11.68□□□□□ -0.54
USP48-213ENST00000529637 MRPS16Q9Y3D3 137 aaKnown RBP11.68□□□□□ -0.54
USP48-213ENST00000529637 TRAV3A0A0B4J244 114 aa11.68□□□□□ -0.54
USP48-213ENST00000529637 IGLC7A0M8Q6 106 aa11.68□□□□□ -0.54
USP48-213ENST00000529637 VAMP3Q15836 100 aa11.68□□□□□ -0.54
USP48-213ENST00000529637 DEFB109BQ30KR1 87 aa11.68□□□□□ -0.54
USP48-213ENST00000529637 STUMQ69YW2 141 aa11.68□□□□□ -0.54
USP48-213ENST00000529637 KLHDC1Q8N7A1 406 aa11.68□□□□□ -0.54
USP48-213ENST00000529637 WDR31Q8NA23 367 aa11.68□□□□□ -0.54
USP48-213ENST00000529637 FAM168AQ92567 244 aa11.68□□□□□ -0.54
USP48-213ENST00000529637 BORCS7Q96B45 105 aa11.68□□□□□ -0.54
USP48-213ENST00000529637 LOC102724200A0A096LPH7 203 aaPredicted RBP11.67□□□□□ -0.54
USP48-213ENST00000529637 TRGV10A0A0A0MS01 117 aa11.67□□□□□ -0.54
USP48-213ENST00000529637 M0R1X1 148 aa11.67□□□□□ -0.54
USP48-213ENST00000529637 PRDX2P32119 198 aa11.67□□□□□ -0.54
USP48-213ENST00000529637 NHLRC2Q8NBF2 726 aa11.67□□□□□ -0.54
USP48-213ENST00000529637 SARAFQ96BY9 339 aa11.67□□□□□ -0.54
USP48-213ENST00000529637 TAAR6Q96RI8 345 aa11.67□□□□□ -0.54
USP48-213ENST00000529637 TRBV9A0A0B4J1U6 114 aa11.67□□□□□ -0.54
USP48-213ENST00000529637 TNFSF4P23510 183 aa11.67□□□□□ -0.54
USP48-213ENST00000529637 GNG4P50150 75 aa11.67□□□□□ -0.54
USP48-213ENST00000529637 LDLRAD2Q5SZI1 272 aa11.67□□□□□ -0.54
USP48-213ENST00000529637 CHODLQ9H9P2 273 aa11.67□□□□□ -0.54
USP48-213ENST00000529637 HEYLQ9NQ87 328 aaPredicted RBP11.67□□□□□ -0.54
USP48-213ENST00000529637 TECRQ9NZ01 308 aaKnown RBP11.67□□□□□ -0.54
USP48-213ENST00000529637 PKDREJQ9NTG1 2253 aa11.67□□□□□ -0.54
USP48-213ENST00000529637 C9JCJ5 164 aa11.67□□□□□ -0.54
USP48-213ENST00000529637 C18orf32Q8TCD1 76 aa11.67□□□□□ -0.54
USP48-213ENST00000529637 TXNDC17Q9BRA2 123 aa11.67□□□□□ -0.54
USP48-213ENST00000529637 SSBP3Q9BWW4 388 aaPredicted RBP11.67□□□□□ -0.54
USP48-213ENST00000529637 HES4Q9HCC6 221 aa11.67□□□□□ -0.54
USP48-213ENST00000529637 ACACAQ13085 2346 aa11.66□□□□□ -0.54
USP48-213ENST00000529637 TRAV17A0A0B4J275 112 aa11.66□□□□□ -0.54
USP48-213ENST00000529637 HELTA6NFD8 242 aa11.66□□□□□ -0.54
USP48-213ENST00000529637 PRSS46E5RG02 174 aa11.66□□□□□ -0.54
USP48-213ENST00000529637 MIR17HGQ75NE6 70 aa11.66□□□□□ -0.54
USP48-213ENST00000529637 Q8TCH9 128 aa11.66□□□□□ -0.54
USP48-213ENST00000529637 LEAP2Q969E1 77 aa11.66□□□□□ -0.54
USP48-213ENST00000529637 SERTAD4Q9NUC0 356 aa11.66□□□□□ -0.54
USP48-213ENST00000529637 PROCRQ9UNN8 238 aa11.66□□□□□ -0.54
USP48-213ENST00000529637 IGKV3-15P01624 115 aa11.66□□□□□ -0.54
USP48-213ENST00000529637 CD177Q8N6Q3 437 aa11.66□□□□□ -0.54
USP48-213ENST00000529637 STPG3Q8N7X2 389 aa11.66□□□□□ -0.54
USP48-213ENST00000529637 OR4A16Q8NH70 328 aa11.66□□□□□ -0.54
USP48-213ENST00000529637 C11orf52Q96A22 123 aa11.66□□□□□ -0.54
USP48-213ENST00000529637 FAM122AQ96E09 287 aa11.66□□□□□ -0.54
USP48-213ENST00000529637 HINT2Q9BX68 163 aa11.66□□□□□ -0.54
USP48-213ENST00000529637 MGAQ8IWI9 3026 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms