RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 RAB1BQ9H0U4 201 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 VSIRQ9H7M9 311 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 BIN3Q9NQY0 253 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 DCAF16Q9NXF7 216 aa9.57□□□□□ -0.88
USF1-208ENST00000528768 A0A1W2PN81 502 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 COLCA2A8K830 154 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 OVOL3O00110 214 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 TSPAN9O75954 239 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 OR2C1O95371 312 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 MT-CO2P00403 227 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 MDKP21741 143 aaPredicted RBP9.56□□□□□ -0.88
USF1-208ENST00000528768 CHRNA7P36544 502 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 ERHP84090 104 aaKnown RBP9.56□□□□□ -0.88
USF1-208ENST00000528768 PRCDQ00LT1 54 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 HNF4GQ14541 408 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 ZNF726P1Q15940 193 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 TMEM249Q2WGJ8 235 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 ZNF672Q499Z4 452 aaPredicted RBP9.56□□□□□ -0.88
USF1-208ENST00000528768 TMEM177Q53S58 311 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 ACSM6Q6P461 480 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 ZCCHC24Q8N2G6 241 aaKnown RBP9.56□□□□□ -0.88
USF1-208ENST00000528768 RAB1CQ92928 201 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 FLYWCH2Q96CP2 140 aaKnown RBP9.56□□□□□ -0.88
USF1-208ENST00000528768 TIMD4Q96H15 378 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 TXNDC17Q9BRA2 123 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 C20orf24Q9BUV8 137 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 HINT2Q9BX68 163 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 COMMD5Q9GZQ3 224 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 PRR14LQ5THK1 2151 aa9.56□□□□□ -0.88
USF1-208ENST00000528768 CR1P17927 2039 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 A0A087X0M5 115 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 A0A1B0GX30 115 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 SEC14L6B5MCN3 397 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 TMEM250H0YL14 139 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 MMP23AO75900 390 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 CCL3L1P16619 93 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 CTRB1P17538 263 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 USF1P22415 310 aaPredicted RBP9.55□□□□□ -0.88
USF1-208ENST00000528768 SUB1P53999 127 aaKnown RBP eCLIP9.55□□□□□ -0.88
USF1-208ENST00000528768 FGF8P55075 233 aaPredicted RBP9.55□□□□□ -0.88
USF1-208ENST00000528768 MEF2BQ02080 365 aaPredicted RBP9.55□□□□□ -0.88
USF1-208ENST00000528768 VMA21Q3ZAQ7 101 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 TMEM155Q4W5P6 130 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 CTRB2Q6GPI1 263 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 TEPPQ6URK8 271 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 IQCF2Q8IXL9 164 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 RPP25LQ8N5L8 163 aaKnown RBP9.55□□□□□ -0.88
USF1-208ENST00000528768 OR5AN1Q8NGI8 311 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 OR4C13Q8NGP0 309 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 OR1L8Q8NGR8 309 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 HARBI1Q96MB7 349 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 TMEM204Q9BSN7 226 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 SLC25A22Q9H936 323 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 WASHC3Q9Y3C0 194 aa9.55□□□□□ -0.88
USF1-208ENST00000528768 TRAV3A0A0B4J244 114 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 ZNF727A8MUV8 499 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 H0YJW9 148 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 RRHO14718 337 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 TGOLN2O43493 480 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 RBP4P02753 201 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 CRYBA1P05813 215 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 IL6RP08887 468 aaPredicted RBP9.54□□□□□ -0.88
USF1-208ENST00000528768 SRD5A1P18405 259 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 LGALS7P47929 136 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 DSCR9P59020 149 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 RPS16P62249 146 aaKnown RBP9.54□□□□□ -0.88
USF1-208ENST00000528768 LYPD2Q6UXB3 125 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 TGIF2LXQ8IUE1 241 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 ABHD12Q8N2K0 398 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 NEUROG1Q92886 237 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 RAB24Q969Q5 203 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 HIST1H2BAQ96A08 127 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 MRPL20Q9BYC9 149 aaKnown RBP9.54□□□□□ -0.88
USF1-208ENST00000528768 CTDSP1Q9GZU7 261 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 TMEM133Q9H2Q1 129 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 MIOXQ9UGB7 285 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 NAT8Q9UHE5 227 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 AMMECR1Q9Y4X0 333 aaPredicted RBP9.54□□□□□ -0.88
USF1-208ENST00000528768 MGAM2Q2M2H8 2515 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 TANC2Q9HCD6 1990 aa9.54□□□□□ -0.88
USF1-208ENST00000528768 F6UZH7 168 aa9.53□□□□□ -0.88
USF1-208ENST00000528768 INS-IGF2F8WCM5 200 aa9.53□□□□□ -0.88
USF1-208ENST00000528768 CA2P00918 260 aa9.53□□□□□ -0.88
USF1-208ENST00000528768 S100A6P06703 90 aa9.53□□□□□ -0.88
USF1-208ENST00000528768 SAA1P0DJI8 122 aaPredicted RBP9.53□□□□□ -0.88
USF1-208ENST00000528768 IGHV1-8P0DP01 117 aa9.53□□□□□ -0.88
USF1-208ENST00000528768 RAB5AP20339 215 aa9.53□□□□□ -0.88
USF1-208ENST00000528768 MAS1LP35410 378 aa9.53□□□□□ -0.88
USF1-208ENST00000528768 AKR1C3P42330 323 aa9.53□□□□□ -0.88
USF1-208ENST00000528768 ZNF137PP52743 207 aa9.53□□□□□ -0.88
USF1-208ENST00000528768 RHOBP62745 196 aa9.53□□□□□ -0.88
USF1-208ENST00000528768 RPL8P62917 257 aaKnown RBP9.53□□□□□ -0.88
USF1-208ENST00000528768 C2orf83Q53S99 150 aa9.53□□□□□ -0.88
USF1-208ENST00000528768 TREML4Q6UXN2 200 aa9.53□□□□□ -0.88
USF1-208ENST00000528768 C1orf229Q6ZS94 237 aaPredicted RBP9.53□□□□□ -0.88
USF1-208ENST00000528768 OR8B3Q8NGG8 313 aa9.53□□□□□ -0.88
USF1-208ENST00000528768 TMEM167AQ8TBQ9 72 aa9.53□□□□□ -0.88
USF1-208ENST00000528768 NEU4Q8WWR8 484 aaPredicted RBP9.53□□□□□ -0.88
USF1-208ENST00000528768 MALSU1Q96EH3 234 aa9.53□□□□□ -0.88
USF1-208ENST00000528768 OR8B2Q96RD0 313 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms