RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 SRSF12Q8WXF0 261 aaKnown RBP16.34■□□□□ 0.21
SMCO4-203ENST00000526869 TAF15Q92804 592 aaKnown RBP eCLIP16.34■□□□□ 0.21
SMCO4-203ENST00000526869 CREBBPQ92793 2442 aa16.34■□□□□ 0.21
SMCO4-203ENST00000526869 IGHV3OR16-10A0A075B7F0 116 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 A0A0U1RQK1 487 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 TEX22C9J3V5 150 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 TRIM77I1YAP6 450 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 FCN1O00602 326 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 ATP6V1G1O75348 118 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 MPDU1O75352 247 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 AVPP01185 164 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 FBP1P09467 338 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 OR13C7P0DN81 318 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 GNB1P62873 340 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 TUSC1Q2TAM9 212 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 FBLN7Q53RD9 439 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 FAM120AOSQ5T036 256 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 BRD3OSQ6XYD6 125 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 OR2G3Q8NGZ4 309 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 RNASEH2CQ8TDP1 164 aaKnown RBP16.33■□□□□ 0.2
SMCO4-203ENST00000526869 PCNPQ8WW12 178 aaKnown RBP16.33■□□□□ 0.2
SMCO4-203ENST00000526869 PLA2G2EQ9NZK7 142 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 WDR83OSQ9Y284 106 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 FAM96BQ9Y3D0 163 aa16.33■□□□□ 0.2
SMCO4-203ENST00000526869 FSHBP01225 129 aa16.32■□□□□ 0.2
SMCO4-203ENST00000526869 BLOC1S1P78537 153 aa16.32■□□□□ 0.2
SMCO4-203ENST00000526869 CYB5R2Q6BCY4 276 aa16.32■□□□□ 0.2
SMCO4-203ENST00000526869 ZNF562Q6V9R5 426 aa16.32■□□□□ 0.2
SMCO4-203ENST00000526869 MAPK1IP1LQ8NDC0 245 aa16.32■□□□□ 0.2
SMCO4-203ENST00000526869 PRRC2AP48634 2157 aaKnown RBP16.31■□□□□ 0.2
SMCO4-203ENST00000526869 PDZD2O15018 2839 aa16.31■□□□□ 0.2
SMCO4-203ENST00000526869 NCBP2LA6PVI3 153 aaKnown RBP16.31■□□□□ 0.2
SMCO4-203ENST00000526869 ZNF705EA8MWA4 302 aaPredicted RBP16.31■□□□□ 0.2
SMCO4-203ENST00000526869 SOX15O60248 233 aa16.31■□□□□ 0.2
SMCO4-203ENST00000526869 TSPAN9O75954 239 aa16.31■□□□□ 0.2
SMCO4-203ENST00000526869 HLA-DRB1P01911 266 aa16.31■□□□□ 0.2
SMCO4-203ENST00000526869 FGF7P21781 194 aa16.31■□□□□ 0.2
SMCO4-203ENST00000526869 GPX4P36969 197 aaPredicted RBP16.31■□□□□ 0.2
SMCO4-203ENST00000526869 SERF2P84101 59 aa16.31■□□□□ 0.2
SMCO4-203ENST00000526869 RUNX1Q01196 453 aa16.31■□□□□ 0.2
SMCO4-203ENST00000526869 DPPA3Q6W0C5 159 aa16.31■□□□□ 0.2
SMCO4-203ENST00000526869 Q8N9W7 124 aa16.31■□□□□ 0.2
SMCO4-203ENST00000526869 CACNG8Q8WXS5 425 aa16.31■□□□□ 0.2
SMCO4-203ENST00000526869 P2RX4Q99571 388 aa16.31■□□□□ 0.2
SMCO4-203ENST00000526869 PARP11Q9NR21 331 aa16.31■□□□□ 0.2
SMCO4-203ENST00000526869 CNIH1O95406 144 aa16.3■□□□□ 0.2
SMCO4-203ENST00000526869 TMEM182Q6ZP80 229 aaPredicted RBP16.3■□□□□ 0.2
SMCO4-203ENST00000526869 CXorf58Q96LI9 332 aa16.3■□□□□ 0.2
SMCO4-203ENST00000526869 NPVFQ9HCQ7 196 aa16.3■□□□□ 0.2
SMCO4-203ENST00000526869 PFDN2Q9UHV9 154 aa16.3■□□□□ 0.2
SMCO4-203ENST00000526869 FLNBO75369 2602 aaKnown RBP16.3■□□□□ 0.2
SMCO4-203ENST00000526869 FXYD3Q14802 87 aa16.29■□□□□ 0.2
SMCO4-203ENST00000526869 BTNL8Q6UX41 500 aa16.29■□□□□ 0.2
SMCO4-203ENST00000526869 WFDC11Q8NEX6 87 aa16.29■□□□□ 0.2
SMCO4-203ENST00000526869 OR1P1Q8NH06 330 aa16.29■□□□□ 0.2
SMCO4-203ENST00000526869 PIFOQ8TCI5 191 aa16.29■□□□□ 0.2
SMCO4-203ENST00000526869 NUDT19A8MXV4 375 aa16.28■□□□□ 0.2
SMCO4-203ENST00000526869 C17orf112F2Z3M2 114 aa16.28■□□□□ 0.2
SMCO4-203ENST00000526869 CORTO00230 105 aa16.28■□□□□ 0.2
SMCO4-203ENST00000526869 AREGP15514 252 aa16.28■□□□□ 0.2
SMCO4-203ENST00000526869 CD69Q07108 199 aa16.28■□□□□ 0.2
SMCO4-203ENST00000526869 ARSJQ5FYB0 599 aaPredicted RBP16.28■□□□□ 0.2
SMCO4-203ENST00000526869 AKR1C8PQ5T2L2 129 aa16.28■□□□□ 0.2
SMCO4-203ENST00000526869 TREML4Q6UXN2 200 aa16.28■□□□□ 0.2
SMCO4-203ENST00000526869 C9orf139Q6ZV77 190 aa16.28■□□□□ 0.2
SMCO4-203ENST00000526869 COMMD7Q86VX2 200 aa16.28■□□□□ 0.2
SMCO4-203ENST00000526869 OR1L6Q8NGR2 347 aa16.28■□□□□ 0.2
SMCO4-203ENST00000526869 ARPC1AQ92747 370 aa16.28■□□□□ 0.2
SMCO4-203ENST00000526869 RBM14Q96PK6 669 aaKnown RBP16.28■□□□□ 0.2
SMCO4-203ENST00000526869 RASL11BQ9BPW5 248 aa16.28■□□□□ 0.2
SMCO4-203ENST00000526869 RSG1Q9BU20 258 aa16.28■□□□□ 0.2
SMCO4-203ENST00000526869 NPCDR1Q9BY65 106 aa16.28■□□□□ 0.2
SMCO4-203ENST00000526869 KCNIP2Q9NS61 270 aa16.28■□□□□ 0.2
SMCO4-203ENST00000526869 LSM4Q9Y4Z0 139 aaKnown RBP16.28■□□□□ 0.2
SMCO4-203ENST00000526869 F11RQ9Y624 299 aaKnown RBP16.28■□□□□ 0.2
SMCO4-203ENST00000526869 CAMLGP49069 296 aa16.27■□□□□ 0.2
SMCO4-203ENST00000526869 CX3CL1P78423 397 aa16.27■□□□□ 0.2
SMCO4-203ENST00000526869 Q6ZRG5 221 aa16.27■□□□□ 0.2
SMCO4-203ENST00000526869 TEX29Q8N6K0 151 aa16.27■□□□□ 0.2
SMCO4-203ENST00000526869 ZNF709Q8N972 641 aa16.27■□□□□ 0.2
SMCO4-203ENST00000526869 SSMEM1Q8WWF3 244 aa16.27■□□□□ 0.2
SMCO4-203ENST00000526869 MOB4Q9Y3A3 225 aa16.27■□□□□ 0.2
SMCO4-203ENST00000526869 SMCO3A2RU48 225 aa16.26■□□□□ 0.19
SMCO4-203ENST00000526869 PRH1P02810 166 aa16.26■□□□□ 0.19
SMCO4-203ENST00000526869 PXDC1Q5TGL8 231 aa16.26■□□□□ 0.19
SMCO4-203ENST00000526869 SLC16A13Q7RTY0 426 aa16.26■□□□□ 0.19
SMCO4-203ENST00000526869 TMEM144Q7Z5S9 345 aa16.26■□□□□ 0.19
SMCO4-203ENST00000526869 NANPQ8TBE9 248 aa16.26■□□□□ 0.19
SMCO4-203ENST00000526869 ABHD5Q8WTS1 349 aa16.26■□□□□ 0.19
SMCO4-203ENST00000526869 SSX3Q99909 188 aa16.26■□□□□ 0.19
SMCO4-203ENST00000526869 SLC25A33Q9BSK2 321 aa16.26■□□□□ 0.19
SMCO4-203ENST00000526869 FBXO7Q9Y3I1 522 aa16.26■□□□□ 0.19
SMCO4-203ENST00000526869 ITPR2Q14571 2701 aa16.26■□□□□ 0.19
SMCO4-203ENST00000526869 ITPR3Q14573 2671 aa16.26■□□□□ 0.19
SMCO4-203ENST00000526869 IGHV7-81A0A0B4J1V7 117 aa16.25■□□□□ 0.19
SMCO4-203ENST00000526869 A6NDX4 124 aa16.25■□□□□ 0.19
SMCO4-203ENST00000526869 NPIPB5A8MRT5 1133 aa16.25■□□□□ 0.19
SMCO4-203ENST00000526869 MBP02144 154 aa16.25■□□□□ 0.19
SMCO4-203ENST00000526869 CRYGCP07315 174 aa16.25■□□□□ 0.19
SMCO4-203ENST00000526869 CTRB1P17538 263 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms