RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 SMCO1Q147U7 214 aa9.6□□□□□ -0.87
CCS-202ENST00000525435 IZUMO4Q1ZYL8 232 aa9.6□□□□□ -0.87
CCS-202ENST00000525435 HIST2H2BDQ6DRA6 164 aa9.6□□□□□ -0.87
CCS-202ENST00000525435 ZNF343Q6P1L6 599 aa9.6□□□□□ -0.87
CCS-202ENST00000525435 C8orf86Q6ZUL3 223 aa9.6□□□□□ -0.87
CCS-202ENST00000525435 OR2C3Q8N628 320 aa9.6□□□□□ -0.87
CCS-202ENST00000525435 ZNF114Q8NC26 417 aa9.6□□□□□ -0.87
CCS-202ENST00000525435 OR10W1Q8NGF6 305 aa9.6□□□□□ -0.87
CCS-202ENST00000525435 ENKURQ8TC29 256 aa9.6□□□□□ -0.87
CCS-202ENST00000525435 CASTOR1Q8WTX7 329 aa9.6□□□□□ -0.87
CCS-202ENST00000525435 FANCD2OSQ96PS1 177 aa9.6□□□□□ -0.87
CCS-202ENST00000525435 P2RX4Q99571 388 aa9.6□□□□□ -0.87
CCS-202ENST00000525435 PLEKHA3Q9HB20 300 aa9.6□□□□□ -0.87
CCS-202ENST00000525435 PALMDQ9NP74 551 aa9.6□□□□□ -0.87
CCS-202ENST00000525435 CACNG5Q9UF02 275 aa9.6□□□□□ -0.87
CCS-202ENST00000525435 MGAM2Q2M2H8 2515 aa9.6□□□□□ -0.87
CCS-202ENST00000525435 IGLV11-55A0A075B6I3 123 aa9.59□□□□□ -0.87
CCS-202ENST00000525435 PF4P02776 101 aa9.59□□□□□ -0.87
CCS-202ENST00000525435 HSPB1P04792 205 aaKnown RBP9.59□□□□□ -0.87
CCS-202ENST00000525435 IL5P05113 134 aa9.59□□□□□ -0.87
CCS-202ENST00000525435 C18orf65Q6ZTR6 163 aa9.59□□□□□ -0.87
CCS-202ENST00000525435 OR1N2Q8NGR9 330 aa9.59□□□□□ -0.87
CCS-202ENST00000525435 OR1P1Q8NH06 330 aa9.59□□□□□ -0.87
CCS-202ENST00000525435 MITD1Q8WV92 249 aa9.59□□□□□ -0.87
CCS-202ENST00000525435 GNB4Q9HAV0 340 aa9.59□□□□□ -0.87
CCS-202ENST00000525435 RANGRFQ9HD47 186 aaPredicted RBP9.59□□□□□ -0.87
CCS-202ENST00000525435 PRR13Q9NZ81 148 aa9.59□□□□□ -0.87
CCS-202ENST00000525435 F11RQ9Y624 299 aaKnown RBP9.59□□□□□ -0.87
CCS-202ENST00000525435 TRAV6A0A075B6T7 132 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 FAM90A26D6RGX4 464 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 PITX3O75364 302 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 IFNA21P01568 189 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 SNCAP37840 140 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 SUB1P53999 127 aaKnown RBP eCLIP9.58□□□□□ -0.88
CCS-202ENST00000525435 ATP5IP56385 69 aaPredicted RBP9.58□□□□□ -0.88
CCS-202ENST00000525435 ZNF616Q08AN1 781 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 FHL3Q13643 280 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 C15orf32Q32M92 178 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 PLET1Q6UQ28 207 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 NRARPQ7Z6K4 114 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 OR11H1Q8NG94 326 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 VN1R17PQ8TDU5 208 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 DPF1Q92782 380 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 RAX2Q96IS3 184 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 CXorf58Q96LI9 332 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 ATP6V0BQ99437 205 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 ENY2Q9NPA8 101 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 FBXL7Q9UJT9 491 aa9.58□□□□□ -0.88
CCS-202ENST00000525435 TRBV7-1A0A0A6YYK4 115 aa9.57□□□□□ -0.88
CCS-202ENST00000525435 OR2J3O76001 311 aa9.57□□□□□ -0.88
CCS-202ENST00000525435 LY86O95711 162 aa9.57□□□□□ -0.88
CCS-202ENST00000525435 PRH1P02810 166 aa9.57□□□□□ -0.88
CCS-202ENST00000525435 REG1AP05451 166 aa9.57□□□□□ -0.88
CCS-202ENST00000525435 OR8U8P0C7N1 319 aa9.57□□□□□ -0.88
CCS-202ENST00000525435 PVRIGQ6DKI7 326 aa9.57□□□□□ -0.88
CCS-202ENST00000525435 SLC25A24Q6NUK1 477 aa9.57□□□□□ -0.88
CCS-202ENST00000525435 ETV3LQ6ZN32 361 aa9.57□□□□□ -0.88
CCS-202ENST00000525435 NOXA1Q86UR1 476 aa9.57□□□□□ -0.88
CCS-202ENST00000525435 LINC00482Q8N8I6 264 aa9.57□□□□□ -0.88
CCS-202ENST00000525435 ZNF431Q8TF32 576 aaPredicted RBP9.57□□□□□ -0.88
CCS-202ENST00000525435 MARVELD1Q9BSK0 173 aa9.57□□□□□ -0.88
CCS-202ENST00000525435 PEF1Q9UBV8 284 aaKnown RBP9.57□□□□□ -0.88
CCS-202ENST00000525435 HSPB7Q9UBY9 170 aa9.57□□□□□ -0.88
CCS-202ENST00000525435 NOTCH3Q9UM47 2321 aa9.57□□□□□ -0.88
CCS-202ENST00000525435 VWFP04275 2813 aa9.56□□□□□ -0.88
CCS-202ENST00000525435 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.56□□□□□ -0.88
CCS-202ENST00000525435 LINC01619G3V211 115 aa9.56□□□□□ -0.88
CCS-202ENST00000525435 PRAF2O60831 178 aa9.56□□□□□ -0.88
CCS-202ENST00000525435 MED6O75586 246 aa9.56□□□□□ -0.88
CCS-202ENST00000525435 NDUFB8O95169 186 aa9.56□□□□□ -0.88
CCS-202ENST00000525435 IGHV3-11P01762 117 aa9.56□□□□□ -0.88
CCS-202ENST00000525435 HOXB5P09067 269 aa9.56□□□□□ -0.88
CCS-202ENST00000525435 ZP3P21754 424 aa9.56□□□□□ -0.88
CCS-202ENST00000525435 TNFRSF9Q07011 255 aa9.56□□□□□ -0.88
CCS-202ENST00000525435 GGNBP1Q5YKI7 109 aa9.56□□□□□ -0.88
CCS-202ENST00000525435 OR1S1Q8NH92 325 aa9.56□□□□□ -0.88
CCS-202ENST00000525435 EEF1AKMT3Q96AZ1 226 aa9.56□□□□□ -0.88
CCS-202ENST00000525435 MCRIP2Q9BUT9 160 aaKnown RBP9.56□□□□□ -0.88
CCS-202ENST00000525435 HIPK2Q9H2X6 1198 aa9.56□□□□□ -0.88
CCS-202ENST00000525435 GPN1Q9HCN4 374 aaPredicted RBP9.56□□□□□ -0.88
CCS-202ENST00000525435 DMRT1Q9Y5R6 373 aa9.56□□□□□ -0.88
CCS-202ENST00000525435 PKD1L1Q8TDX9 2849 aa9.55□□□□□ -0.88
CCS-202ENST00000525435 SNRPGP15A8MWD9 76 aa9.55□□□□□ -0.88
CCS-202ENST00000525435 INMT-MINDY4F8WBC2 141 aa9.55□□□□□ -0.88
CCS-202ENST00000525435 CORTO00230 105 aa9.55□□□□□ -0.88
CCS-202ENST00000525435 HTR2BP41595 481 aa9.55□□□□□ -0.88
CCS-202ENST00000525435 HOXA1P49639 335 aaPredicted RBP9.55□□□□□ -0.88
CCS-202ENST00000525435 DEFB136Q30KP8 78 aa9.55□□□□□ -0.88
CCS-202ENST00000525435 BSXQ3C1V8 233 aa9.55□□□□□ -0.88
CCS-202ENST00000525435 RCC1LQ96I51 464 aaKnown RBP9.55□□□□□ -0.88
CCS-202ENST00000525435 OR5B12Q96R08 314 aa9.55□□□□□ -0.88
CCS-202ENST00000525435 HEYLQ9NQ87 328 aaPredicted RBP9.55□□□□□ -0.88
CCS-202ENST00000525435 GAR1Q9NY12 217 aaKnown RBP9.55□□□□□ -0.88
CCS-202ENST00000525435 U3KQ87 197 aa9.55□□□□□ -0.88
CCS-202ENST00000525435 CEBPZOSA8MTT3 80 aa9.54□□□□□ -0.88
CCS-202ENST00000525435 PTTG1O95997 202 aa9.54□□□□□ -0.88
CCS-202ENST00000525435 CD33P20138 364 aa9.54□□□□□ -0.88
CCS-202ENST00000525435 MFAP2P55001 183 aa9.54□□□□□ -0.88
CCS-202ENST00000525435 ID3Q02535 119 aa9.54□□□□□ -0.88
CCS-202ENST00000525435 EXOSC2Q13868 293 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms