RNA–Protein interactions for RNA: ENST00000523613.5

HMBOX1-210, Transcript of homeobox containing 1, humanhuman

TSL 1 (best) BASIC

Gene HMBOX1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-210ENST00000523613 JTBO76095 146 aa11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 RNASE2P10153 161 aaKnown RBP11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 ARL16Q0P5N6 197 aa11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 ZNF266Q14584 549 aa11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 BSXQ3C1V8 233 aa11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 RPL7L1Q6DKI1 246 aaKnown RBP11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 TEX261Q6UWH6 196 aa11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 ZNF48Q96MX3 618 aaPredicted RBP11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 ATP5SQ99766 215 aa11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 PRDM13Q9H4Q3 707 aa11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 WFDC1Q9HC57 220 aa11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 PMS2P5A8MQ11 134 aa11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 REG1AP05451 166 aa11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 APELAP0DMC3 54 aa11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 TPT1P13693 172 aaKnown RBP11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 AREGP15514 252 aa11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 FLNAP21333 2647 aaKnown RBP11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 ATP6V1FQ16864 119 aa11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 STOML3Q8TAV4 291 aa11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 TMEM170AQ8WVE7 144 aa11.94□□□□□ -0.5
HMBOX1-210ENST00000523613 LY6G6DO95868 133 aa11.93□□□□□ -0.5
HMBOX1-210ENST00000523613 CFDP00746 253 aaPredicted RBP11.93□□□□□ -0.5
HMBOX1-210ENST00000523613 CD99P14209 185 aa11.93□□□□□ -0.5
HMBOX1-210ENST00000523613 SCGB2A2Q13296 93 aa11.93□□□□□ -0.5
HMBOX1-210ENST00000523613 TUSC1Q2TAM9 212 aa11.93□□□□□ -0.5
HMBOX1-210ENST00000523613 ZNF767PQ75MW2 155 aa11.93□□□□□ -0.5
HMBOX1-210ENST00000523613 ST8SIA2Q92186 375 aa11.93□□□□□ -0.5
HMBOX1-210ENST00000523613 SMR3AQ99954 134 aa11.93□□□□□ -0.5
HMBOX1-210ENST00000523613 HSPB9Q9BQS6 159 aa11.93□□□□□ -0.5
HMBOX1-210ENST00000523613 FAM103A1Q9BTL3 118 aaKnown RBP11.93□□□□□ -0.5
HMBOX1-210ENST00000523613 CSPG4Q6UVK1 2322 aa11.93□□□□□ -0.5
HMBOX1-210ENST00000523613 CSMD1Q96PZ7 3565 aa11.92□□□□□ -0.5
HMBOX1-210ENST00000523613 IFNA5P01569 189 aa11.92□□□□□ -0.5
HMBOX1-210ENST00000523613 FOSL1P15407 271 aa11.92□□□□□ -0.5
HMBOX1-210ENST00000523613 NDPQ00604 133 aa11.92□□□□□ -0.5
HMBOX1-210ENST00000523613 SLC25A24Q6NUK1 477 aa11.92□□□□□ -0.5
HMBOX1-210ENST00000523613 BAP18Q8IXM2 172 aa11.92□□□□□ -0.5
HMBOX1-210ENST00000523613 SIGLECL1Q8N7X8 197 aa11.92□□□□□ -0.5
HMBOX1-210ENST00000523613 UBAC2Q8NBM4 344 aa11.92□□□□□ -0.5
HMBOX1-210ENST00000523613 ZNF114Q8NC26 417 aa11.92□□□□□ -0.5
HMBOX1-210ENST00000523613 ZNF680Q8NEM1 530 aa11.92□□□□□ -0.5
HMBOX1-210ENST00000523613 P2RX4Q99571 388 aa11.92□□□□□ -0.5
HMBOX1-210ENST00000523613 TMEM147Q9BVK8 224 aa11.92□□□□□ -0.5
HMBOX1-210ENST00000523613 PARP11Q9NR21 331 aa11.92□□□□□ -0.5
HMBOX1-210ENST00000523613 TNFRSF19Q9NS68 423 aa11.92□□□□□ -0.5
HMBOX1-210ENST00000523613 VPREB3Q9UKI3 123 aa11.92□□□□□ -0.5
HMBOX1-210ENST00000523613 MYO9AB2RTY4 2548 aa11.92□□□□□ -0.5
HMBOX1-210ENST00000523613 SH2D7A6NKC9 451 aaPredicted RBP11.91□□□□□ -0.5
HMBOX1-210ENST00000523613 HOXA3O43365 443 aaPredicted RBP11.91□□□□□ -0.5
HMBOX1-210ENST00000523613 IFNA7P01567 189 aa11.91□□□□□ -0.5
HMBOX1-210ENST00000523613 AMY1AP04745 511 aa11.91□□□□□ -0.5
HMBOX1-210ENST00000523613 C9orf152Q5JTZ5 239 aa11.91□□□□□ -0.5
HMBOX1-210ENST00000523613 RBMS3Q6XE24 437 aaKnown RBP11.91□□□□□ -0.5
HMBOX1-210ENST00000523613 GGACTQ9BVM4 153 aa11.91□□□□□ -0.5
HMBOX1-210ENST00000523613 TMUB1Q9BVT8 246 aa11.91□□□□□ -0.5
HMBOX1-210ENST00000523613 UQCC1Q9NVA1 299 aa11.91□□□□□ -0.5
HMBOX1-210ENST00000523613 NOTCH2Q04721 2471 aa11.91□□□□□ -0.5
HMBOX1-210ENST00000523613 ZANQ9Y493 2812 aa11.91□□□□□ -0.5
HMBOX1-210ENST00000523613 DLK1P80370 383 aa11.91□□□□□ -0.5
HMBOX1-210ENST00000523613 OR1P1Q8NH06 330 aa11.91□□□□□ -0.5
HMBOX1-210ENST00000523613 RNASEH2CQ8TDP1 164 aaKnown RBP11.91□□□□□ -0.5
HMBOX1-210ENST00000523613 F11RQ9Y624 299 aaKnown RBP11.91□□□□□ -0.5
HMBOX1-210ENST00000523613 PLXNB1O43157 2135 aa11.9□□□□□ -0.5
HMBOX1-210ENST00000523613 PRSS46E5RG02 174 aa11.9□□□□□ -0.5
HMBOX1-210ENST00000523613 ATP6V0E1O15342 81 aa11.9□□□□□ -0.5
HMBOX1-210ENST00000523613 EGR2P11161 476 aaPredicted RBP11.9□□□□□ -0.5
HMBOX1-210ENST00000523613 DEFA4P12838 97 aa11.9□□□□□ -0.5
HMBOX1-210ENST00000523613 SGMS2Q8NHU3 365 aa11.9□□□□□ -0.5
HMBOX1-210ENST00000523613 SCGB1C1Q8TD33 95 aa11.9□□□□□ -0.5
HMBOX1-210ENST00000523613 PHYHIPLQ96FC7 376 aa11.9□□□□□ -0.5
HMBOX1-210ENST00000523613 FBXO7Q9Y3I1 522 aa11.9□□□□□ -0.5
HMBOX1-210ENST00000523613 UBE2L5PA0A1B0GUS4 154 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 SMCO3A2RU48 225 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 NPIPB5A8MRT5 1133 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 CORTO00230 105 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 CTRB1P17538 263 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 EXOSC2Q13868 293 aaKnown RBP11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 CTRB2Q6GPI1 263 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 EIF5AL1Q6IS14 154 aaKnown RBP11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 UNQ5815/PRO19632Q6UWF5 114 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 TTC9CQ8N5M4 171 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 HSD17B11Q8NBQ5 300 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 LFNGQ8NES3 379 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 OR1L6Q8NGR2 347 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 WNT10AQ9GZT5 417 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 ARV1Q9H2C2 271 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 TEX15Q9BXT5 2789 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 CYB5BO43169 146 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 CRYGCP07315 174 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 NDUFA5Q16718 116 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 ECSCRQ19T08 205 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 VWC2Q2TAL6 325 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 ASPHD1Q5U4P2 390 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 ALKAL2Q6UX46 152 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 SLC35E3Q7Z769 313 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 TMEM86BQ8N661 226 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 MISP3Q96FF7 219 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 TMEM68Q96MH6 324 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 GINS3Q9BRX5 216 aa11.89□□□□□ -0.51
HMBOX1-210ENST00000523613 PARD6GQ9BYG4 376 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms