RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 SRSF1Q07955 248 aaKnown RBP eCLIP14.86□□□□□ -0.03
TRAPPC9-210ENST00000521667 RAB31Q13636 194 aa14.86□□□□□ -0.03
TRAPPC9-210ENST00000521667 SMUG1Q53HV7 270 aa14.86□□□□□ -0.03
TRAPPC9-210ENST00000521667 GCSAMLQ5JQS6 135 aa14.86□□□□□ -0.03
TRAPPC9-210ENST00000521667 MIC13Q5XKP0 118 aa14.86□□□□□ -0.03
TRAPPC9-210ENST00000521667 HCP5Q6MZN7 132 aa14.86□□□□□ -0.03
TRAPPC9-210ENST00000521667 MMD2Q8IY49 270 aa14.86□□□□□ -0.03
TRAPPC9-210ENST00000521667 CYB561D1Q8N8Q1 229 aa14.86□□□□□ -0.03
TRAPPC9-210ENST00000521667 ODF3BA8MYP8 253 aa14.85□□□□□ -0.03
TRAPPC9-210ENST00000521667 CNTFRP26992 372 aa14.85□□□□□ -0.03
TRAPPC9-210ENST00000521667 CEBPGP53567 150 aa14.85□□□□□ -0.03
TRAPPC9-210ENST00000521667 KLRD1Q13241 179 aa14.85□□□□□ -0.03
TRAPPC9-210ENST00000521667 PRSS8Q16651 343 aa14.85□□□□□ -0.03
TRAPPC9-210ENST00000521667 RBMS3Q6XE24 437 aaKnown RBP14.85□□□□□ -0.03
TRAPPC9-210ENST00000521667 VAX2Q9UIW0 290 aa14.85□□□□□ -0.03
TRAPPC9-210ENST00000521667 CHD6Q8TD26 2715 aa14.85□□□□□ -0.03
TRAPPC9-210ENST00000521667 DEFA4P12838 97 aa14.85□□□□□ -0.03
TRAPPC9-210ENST00000521667 CEACAM3P40198 252 aa14.85□□□□□ -0.03
TRAPPC9-210ENST00000521667 AWAT1Q58HT5 328 aa14.85□□□□□ -0.03
TRAPPC9-210ENST00000521667 SSMEM1Q8WWF3 244 aa14.85□□□□□ -0.03
TRAPPC9-210ENST00000521667 RNF5Q99942 180 aa14.85□□□□□ -0.03
TRAPPC9-210ENST00000521667 SIGLEC9Q9Y336 463 aa14.85□□□□□ -0.03
TRAPPC9-210ENST00000521667 M0R036 132 aa14.84□□□□□ -0.03
TRAPPC9-210ENST00000521667 CD69Q07108 199 aa14.84□□□□□ -0.03
TRAPPC9-210ENST00000521667 AKIRIN2Q53H80 203 aa14.84□□□□□ -0.03
TRAPPC9-210ENST00000521667 TMEM144Q7Z5S9 345 aa14.84□□□□□ -0.03
TRAPPC9-210ENST00000521667 P2RX4Q99571 388 aa14.84□□□□□ -0.03
TRAPPC9-210ENST00000521667 TMPRSS5Q9H3S3 457 aa14.84□□□□□ -0.03
TRAPPC9-210ENST00000521667 SPTAN1Q13813 2472 aaKnown RBP14.84□□□□□ -0.03
TRAPPC9-210ENST00000521667 A0A1W2PPV4 95 aa14.83□□□□□ -0.03
TRAPPC9-210ENST00000521667 TIMM23O14925 209 aa14.83□□□□□ -0.03
TRAPPC9-210ENST00000521667 MAS1LP35410 378 aa14.83□□□□□ -0.03
TRAPPC9-210ENST00000521667 RPL29P47914 159 aaKnown RBP14.83□□□□□ -0.03
TRAPPC9-210ENST00000521667 SUB1P53999 127 aaKnown RBP eCLIP14.83□□□□□ -0.03
TRAPPC9-210ENST00000521667 B2MP61769 119 aa14.83□□□□□ -0.03
TRAPPC9-210ENST00000521667 VMO1Q7Z5L0 202 aa14.83□□□□□ -0.03
TRAPPC9-210ENST00000521667 BPESC1Q9GZL8 116 aa14.83□□□□□ -0.03
TRAPPC9-210ENST00000521667 METTL1Q9UBP6 276 aaKnown RBP14.83□□□□□ -0.03
TRAPPC9-210ENST00000521667 PUS1Q9Y606 427 aaKnown RBP eCLIP14.83□□□□□ -0.03
TRAPPC9-210ENST00000521667 ACTL6BO94805 426 aa14.83□□□□□ -0.04
TRAPPC9-210ENST00000521667 GPX4P36969 197 aaPredicted RBP14.83□□□□□ -0.04
TRAPPC9-210ENST00000521667 GAMTQ14353 236 aa14.83□□□□□ -0.04
TRAPPC9-210ENST00000521667 TNXAQ16473 311 aa14.83□□□□□ -0.04
TRAPPC9-210ENST00000521667 STPG3Q8N7X2 389 aa14.83□□□□□ -0.04
TRAPPC9-210ENST00000521667 IGFBPL1Q8WX77 278 aa14.83□□□□□ -0.04
TRAPPC9-210ENST00000521667 CACNG8Q8WXS5 425 aa14.83□□□□□ -0.04
TRAPPC9-210ENST00000521667 C20orf24Q9BUV8 137 aa14.83□□□□□ -0.04
TRAPPC9-210ENST00000521667 RPS10P5Q9NQ39 176 aa14.83□□□□□ -0.04
TRAPPC9-210ENST00000521667 C7orf77A4D0Y5 90 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 IGHV4-39P01824 125 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 SNRNP70P08621 437 aaKnown RBP14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 TAGLN2P37802 199 aaKnown RBP14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 RPL27AP46776 148 aaKnown RBP14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 LCN2P80188 198 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 PPP1R27Q86WC6 154 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 MRPL41Q8IXM3 137 aaKnown RBP14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 RNASEH2CQ8TDP1 164 aaKnown RBP14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 MANBALQ9NQG1 85 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 HILPDAQ9Y5L2 63 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 VENTXO95231 258 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 PSMB3P49720 205 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 PRR20EP86478 221 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 PRR20CP86479 221 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 PRR20DP86480 221 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 PRR20BP86481 221 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 PRR20AP86496 221 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 PAX2Q02962 417 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 RHEBQ15382 184 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 MLANAQ16655 118 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 TMEM249Q2WGJ8 235 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 SLC16A13Q7RTY0 426 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 SLC35E3Q7Z769 313 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 LHFPL4Q7Z7J7 247 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 IQCF2Q8IXL9 164 aa14.82□□□□□ -0.04
TRAPPC9-210ENST00000521667 TNCP24821 2201 aa14.81□□□□□ -0.04
TRAPPC9-210ENST00000521667 IGLC7A0M8Q6 106 aa14.81□□□□□ -0.04
TRAPPC9-210ENST00000521667 H3BQ15 152 aa14.81□□□□□ -0.04
TRAPPC9-210ENST00000521667 COMPP49747 757 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC9-210ENST00000521667 LMO4P61968 165 aa14.81□□□□□ -0.04
TRAPPC9-210ENST00000521667 MEF2BQ02080 365 aaPredicted RBP14.81□□□□□ -0.04
TRAPPC9-210ENST00000521667 CFHR4Q92496 578 aa14.81□□□□□ -0.04
TRAPPC9-210ENST00000521667 SMCO4Q9NRQ5 59 aa14.81□□□□□ -0.04
TRAPPC9-210ENST00000521667 IGHV2-70DA0A0C4DH43 119 aa14.8□□□□□ -0.04
TRAPPC9-210ENST00000521667 A0A1W2PRD5 423 aa14.8□□□□□ -0.04
TRAPPC9-210ENST00000521667 A0A1W2PRF3 423 aa14.8□□□□□ -0.04
TRAPPC9-210ENST00000521667 A0A1W2PRM7 423 aa14.8□□□□□ -0.04
TRAPPC9-210ENST00000521667 AKR1C3P42330 323 aa14.8□□□□□ -0.04
TRAPPC9-210ENST00000521667 PDLIM4P50479 330 aa14.8□□□□□ -0.04
TRAPPC9-210ENST00000521667 HABP2Q14520 560 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC9-210ENST00000521667 FAM90A2PQ658T7 463 aa14.8□□□□□ -0.04
TRAPPC9-210ENST00000521667 SLC35E1Q96K37 410 aa14.8□□□□□ -0.04
TRAPPC9-210ENST00000521667 SIRPDQ9H106 197 aa14.8□□□□□ -0.04
TRAPPC9-210ENST00000521667 FBXL15Q9H469 300 aa14.8□□□□□ -0.04
TRAPPC9-210ENST00000521667 SLC45A2Q9UMX9 530 aa14.8□□□□□ -0.04
TRAPPC9-210ENST00000521667 KLF2Q9Y5W3 355 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC9-210ENST00000521667 IGKV1OR2-108A0A075B7D4 117 aa14.8□□□□□ -0.04
TRAPPC9-210ENST00000521667 HOXB4P17483 251 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC9-210ENST00000521667 CCL19Q99731 98 aa14.8□□□□□ -0.04
TRAPPC9-210ENST00000521667 NIPSNAP3BQ9BS92 247 aa14.8□□□□□ -0.04
TRAPPC9-210ENST00000521667 REG1AP05451 166 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms