RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 P0C879 139 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 CGB3P0DN86 165 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 CGB7P0DN87 165 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 SELLP14151 372 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 MUC1P15941 1255 aaPredicted RBP5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 CNTFRP26992 372 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 MYCNOSP40205 109 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 VDAC2P45880 294 aaPredicted RBP5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 CAV2P51636 162 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 LINC00205P59089 165 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 ERVFRD-1P60508 538 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 PAX5Q02548 391 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 CLINT1Q14677 625 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 MSMO1Q15800 293 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 LTC4SQ16873 150 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 OR2B11Q5JQS5 317 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 C10orf91Q5T1B1 145 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 C11orf42Q8N5U0 333 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 HSD17B11Q8NBQ5 300 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 LY6G5BQ8NDX9 201 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 LYPD6BQ8NI32 183 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 RNASE11Q8TAA1 199 aaKnown RBP5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 ABHD14AQ9BUJ0 271 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 SCRT1Q9BWW7 348 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 FAM234AQ9H0X4 552 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 TREM1Q9NP99 234 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 PARP11Q9NR21 331 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 LIN7CQ9NUP9 197 aaKnown RBP5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 RNF7Q9UBF6 113 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 PSG11Q9UQ72 335 aa5.69□□□□□ -1.5
CTNNA1-227ENST00000521387 RNF213Q63HN8 5207 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 PIGBOS1A0A0B4J2F0 54 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 A6NDX4 124 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 C9JQL5 133 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 DNASE2O00115 360 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 F2RL2O00254 374 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 SPINT2O43291 252 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 TXNL1O43396 289 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 SYNGR2O43760 224 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 PROP1O75360 226 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 IAPPP10997 89 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 ADCYAP1P18509 176 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 GZMHP20718 246 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 ATP6V0CP27449 155 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 CAMLGP49069 296 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 RAB13P51153 203 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 RPL23AP62750 156 aaKnown RBP5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 HTD2P86397 168 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 DEFA5Q01523 94 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 ARL16Q0P5N6 197 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 TMEM267Q0VDI3 215 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 ZNF816Q0VGE8 651 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 GUCA2BQ16661 112 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 C17orf58Q2M2W7 97 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 Q3ZCU0 254 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 MORN2Q502X0 79 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 KHDC1LQ5JSQ8 128 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 UTF1Q5T230 341 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 C9orf66Q5T8R8 295 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 TRAT1Q6PIZ9 186 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 TMEM182Q6ZP80 229 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 CENPVQ7Z7K6 275 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 HAPLN4Q86UW8 402 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 TMEM219Q86XT9 240 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 MAPKAPK5-AS1Q8N8E1 139 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 ZNRF1Q8ND25 227 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 NARS2Q96I59 477 aaKnown RBP5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 GAFA1Q96PS6 74 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 RAB40CQ96S21 281 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 TSNAXQ99598 290 aaKnown RBP5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 C19orf12Q9NSK7 152 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 FAM212BQ9NTI7 297 aaPredicted RBP5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 PSENENQ9NZ42 101 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 STRAPQ9Y3F4 350 aaKnown RBP5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 TNCP24821 2201 aa5.68□□□□□ -1.5
CTNNA1-227ENST00000521387 LINC00473A8K010 186 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 H3BP45 60 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 RAB29O14966 203 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 AGPAT2O15120 278 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 SLC31A2O15432 143 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 YPEL1O60688 119 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 ATG12O94817 140 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 S1PR2O95136 353 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 LY86O95711 162 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 GYPAP02724 150 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 CD5P06127 495 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 TNFSF4P23510 183 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 G6PCP35575 357 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 SNCAP37840 140 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 FHITP49789 147 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 UBE2E1P51965 193 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 F2RL1P55085 397 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 EDDM3BP56851 147 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 BAXQ07812 192 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 CATR1Q13166 79 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 ZNF273Q14593 569 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 NCR3LG1Q68D85 454 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 STUMQ69YW2 141 aa5.67□□□□□ -1.5
CTNNA1-227ENST00000521387 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms