RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 FKBP11Q9NYL4 201 aa14.6□□□□□ -0.07
PABPC1-215ENST00000520804 TP53TG1Q9Y2A0 90 aa14.6□□□□□ -0.07
PABPC1-215ENST00000520804 DBX1A6NMT0 343 aa14.59□□□□□ -0.07
PABPC1-215ENST00000520804 HLA-DMAP28067 261 aa14.59□□□□□ -0.07
PABPC1-215ENST00000520804 PHLDA2Q53GA4 152 aa14.59□□□□□ -0.07
PABPC1-215ENST00000520804 Q6ZWC4 215 aa14.59□□□□□ -0.07
PABPC1-215ENST00000520804 WFDC3Q8IUB2 231 aa14.59□□□□□ -0.07
PABPC1-215ENST00000520804 UBAC2Q8NBM4 344 aa14.59□□□□□ -0.07
PABPC1-215ENST00000520804 GPX8Q8TED1 209 aa14.59□□□□□ -0.07
PABPC1-215ENST00000520804 TSC22D3Q99576 134 aa14.59□□□□□ -0.07
PABPC1-215ENST00000520804 FAM212BQ9NTI7 297 aaPredicted RBP14.59□□□□□ -0.07
PABPC1-215ENST00000520804 TMEM14BQ9NUH8 114 aa14.59□□□□□ -0.07
PABPC1-215ENST00000520804 IGHV3OR16-8A0A075B7F1 116 aa14.58□□□□□ -0.08
PABPC1-215ENST00000520804 C15orf61A6NNL5 157 aa14.58□□□□□ -0.08
PABPC1-215ENST00000520804 EIF4EP06730 217 aaKnown RBP14.58□□□□□ -0.08
PABPC1-215ENST00000520804 ODF3L2Q3SX64 289 aa14.58□□□□□ -0.08
PABPC1-215ENST00000520804 Q56UQ5 140 aa14.58□□□□□ -0.08
PABPC1-215ENST00000520804 LPCAT3Q6P1A2 487 aa14.58□□□□□ -0.08
PABPC1-215ENST00000520804 OR1P1Q8NH06 330 aa14.58□□□□□ -0.08
PABPC1-215ENST00000520804 SLC25A46Q96AG3 418 aa14.58□□□□□ -0.08
PABPC1-215ENST00000520804 OR4C46A6NHA9 309 aa14.57□□□□□ -0.08
PABPC1-215ENST00000520804 C15orf62A8K5M9 175 aa14.57□□□□□ -0.08
PABPC1-215ENST00000520804 UBE2CO00762 179 aa14.57□□□□□ -0.08
PABPC1-215ENST00000520804 SPRY2O43597 315 aa14.57□□□□□ -0.08
PABPC1-215ENST00000520804 ZNF207O43670 478 aaKnown RBP14.57□□□□□ -0.08
PABPC1-215ENST00000520804 CTSGP08311 255 aa14.57□□□□□ -0.08
PABPC1-215ENST00000520804 S100GP29377 79 aa14.57□□□□□ -0.08
PABPC1-215ENST00000520804 BMI1P35226 326 aa14.57□□□□□ -0.08
PABPC1-215ENST00000520804 TSPAN5P62079 268 aa14.57□□□□□ -0.08
PABPC1-215ENST00000520804 TBC1D26Q86UD7 250 aa14.57□□□□□ -0.08
PABPC1-215ENST00000520804 ZNF414Q96IQ9 312 aa14.57□□□□□ -0.08
PABPC1-215ENST00000520804 VCX3AQ9NNX9 186 aa14.57□□□□□ -0.08
PABPC1-215ENST00000520804 A0A087WXM4 84 aa14.56□□□□□ -0.08
PABPC1-215ENST00000520804 KIR2DL5BA0A0G2JN68 375 aa14.56□□□□□ -0.08
PABPC1-215ENST00000520804 KIR2DL5BA0A0G2JPC4 375 aa14.56□□□□□ -0.08
PABPC1-215ENST00000520804 A0A0J9YWU9 116 aa14.56□□□□□ -0.08
PABPC1-215ENST00000520804 TNFRSF9Q07011 255 aa14.56□□□□□ -0.08
PABPC1-215ENST00000520804 DEFB135Q30KP9 77 aa14.56□□□□□ -0.08
PABPC1-215ENST00000520804 KIR2DL5AQ8N109 375 aa14.56□□□□□ -0.08
PABPC1-215ENST00000520804 KIR2DL5BQ8NHK3 375 aa14.56□□□□□ -0.08
PABPC1-215ENST00000520804 CMTM3Q96MX0 182 aa14.56□□□□□ -0.08
PABPC1-215ENST00000520804 SCPEP1Q9HB40 452 aa14.56□□□□□ -0.08
PABPC1-215ENST00000520804 COMMD3Q9UBI1 195 aa14.56□□□□□ -0.08
PABPC1-215ENST00000520804 SMPXQ9UHP9 88 aa14.56□□□□□ -0.08
PABPC1-215ENST00000520804 APOA1P02647 267 aa14.55□□□□□ -0.08
PABPC1-215ENST00000520804 CTSDP07339 412 aaPredicted RBP14.55□□□□□ -0.08
PABPC1-215ENST00000520804 RELQ04864 619 aaPredicted RBP14.55□□□□□ -0.08
PABPC1-215ENST00000520804 LYG2Q86SG7 212 aa14.55□□□□□ -0.08
PABPC1-215ENST00000520804 SEC22AQ96IW7 307 aa14.55□□□□□ -0.08
PABPC1-215ENST00000520804 SMIM31A0A1B0GVY4 71 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 CXorf65A6NEN9 183 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 I3L2K1 104 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 NUPL2O15504 423 aaKnown RBP14.54□□□□□ -0.08
PABPC1-215ENST00000520804 IGKV1-39P01597 117 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 IGKV1D-39P04432 117 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 FCGR2BP31994 310 aaPredicted RBP14.54□□□□□ -0.08
PABPC1-215ENST00000520804 RCVRNP35243 200 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 UCP3P55916 312 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 EWSR1Q01844 656 aaKnown RBP eCLIP14.54□□□□□ -0.08
PABPC1-215ENST00000520804 PMS2P11Q13670 270 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 H2BFWTQ7Z2G1 175 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 SNX29P2Q8IUI4 249 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 STPG3Q8N7X2 389 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 ZNF114Q8NC26 417 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 OR4A16Q8NH70 328 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 LINC00476Q8WZB0 136 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 RNF183Q96D59 192 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 MISP3Q96FF7 219 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 RNF2Q99496 336 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 TXN2Q99757 166 aa14.54□□□□□ -0.08
PABPC1-215ENST00000520804 IGHV7-4-1A0A0J9YVY3 117 aa14.53□□□□□ -0.08
PABPC1-215ENST00000520804 CHEK1O14757 476 aa14.53□□□□□ -0.08
PABPC1-215ENST00000520804 MFAP4P55083 255 aa14.53□□□□□ -0.08
PABPC1-215ENST00000520804 NCS1P62166 190 aa14.53□□□□□ -0.08
PABPC1-215ENST00000520804 PRCDQ00LT1 54 aa14.53□□□□□ -0.08
PABPC1-215ENST00000520804 MRGPRFQ96AM1 343 aa14.53□□□□□ -0.08
PABPC1-215ENST00000520804 GALNT14Q96FL9 552 aa14.53□□□□□ -0.08
PABPC1-215ENST00000520804 OR10C1Q96KK4 312 aa14.53□□□□□ -0.08
PABPC1-215ENST00000520804 RHPN1-AS1Q9BWJ2 59 aa14.53□□□□□ -0.08
PABPC1-215ENST00000520804 NUPR2A6NF83 97 aa14.52□□□□□ -0.09
PABPC1-215ENST00000520804 YIF1AO95070 293 aa14.52□□□□□ -0.09
PABPC1-215ENST00000520804 TNFAIP8O95379 198 aa14.52□□□□□ -0.09
PABPC1-215ENST00000520804 MT-CO2P00403 227 aa14.52□□□□□ -0.09
PABPC1-215ENST00000520804 RPL35AP18077 110 aaKnown RBP14.52□□□□□ -0.09
PABPC1-215ENST00000520804 TMEM116Q8NCL8 245 aa14.52□□□□□ -0.09
PABPC1-215ENST00000520804 NXF2Q9GZY0 626 aaKnown RBP14.52□□□□□ -0.09
PABPC1-215ENST00000520804 MAP6D1Q9H9H5 199 aa14.52□□□□□ -0.09
PABPC1-215ENST00000520804 ATF4P18848 351 aaPredicted RBP14.51□□□□□ -0.09
PABPC1-215ENST00000520804 ELK1P19419 428 aa14.51□□□□□ -0.09
PABPC1-215ENST00000520804 HSPE1P61604 102 aaKnown RBP14.51□□□□□ -0.09
PABPC1-215ENST00000520804 FUNDC2Q9BWH2 189 aa14.51□□□□□ -0.09
PABPC1-215ENST00000520804 IGHV3-49A0A0A0MS15 119 aa14.5□□□□□ -0.09
PABPC1-215ENST00000520804 HPGDSO60760 199 aa14.5□□□□□ -0.09
PABPC1-215ENST00000520804 IGHV3-48P01763 117 aa14.5□□□□□ -0.09
PABPC1-215ENST00000520804 VBP1P61758 197 aa14.5□□□□□ -0.09
PABPC1-215ENST00000520804 ERHP84090 104 aaKnown RBP14.5□□□□□ -0.09
PABPC1-215ENST00000520804 CEMP1Q6PRD7 247 aaPredicted RBP14.5□□□□□ -0.09
PABPC1-215ENST00000520804 APRG1Q8IVJ8 170 aa14.5□□□□□ -0.09
PABPC1-215ENST00000520804 PINX1Q96BK5 328 aaKnown RBP14.5□□□□□ -0.09
PABPC1-215ENST00000520804 C6orf62Q9GZU0 229 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms