RNA–Protein interactions for RNA: ENST00000520126.1

CLK4-204, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 1,316 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-204ENST00000520126 PPP1R1AQ13522 171 aa13.28□□□□□ -0.28
CLK4-204ENST00000520126 LYZL2Q7Z4W2 148 aa13.28□□□□□ -0.28
CLK4-204ENST00000520126 FAM219AQ8IW50 185 aa13.28□□□□□ -0.28
CLK4-204ENST00000520126 DCUN1D4Q92564 292 aa13.28□□□□□ -0.28
CLK4-204ENST00000520126 FANCD2OSQ96PS1 177 aa13.28□□□□□ -0.28
CLK4-204ENST00000520126 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.28□□□□□ -0.28
CLK4-204ENST00000520126 THYN1Q9P016 225 aa13.28□□□□□ -0.28
CLK4-204ENST00000520126 TMEM56-RWDD3S4R434 201 aa13.28□□□□□ -0.28
CLK4-204ENST00000520126 MGAM2Q2M2H8 2515 aa13.27□□□□□ -0.29
CLK4-204ENST00000520126 TRBV9A0A0B4J1U6 114 aa13.27□□□□□ -0.29
CLK4-204ENST00000520126 BRI3O95415 125 aa13.27□□□□□ -0.29
CLK4-204ENST00000520126 SFT2D2O95562 160 aa13.27□□□□□ -0.29
CLK4-204ENST00000520126 TRBV12-3P01733 135 aa13.27□□□□□ -0.29
CLK4-204ENST00000520126 SRPXP78539 464 aa13.27□□□□□ -0.29
CLK4-204ENST00000520126 PRCDQ00LT1 54 aa13.27□□□□□ -0.29
CLK4-204ENST00000520126 C4orf46Q504U0 113 aa13.27□□□□□ -0.29
CLK4-204ENST00000520126 Q6ZRM9 215 aa13.27□□□□□ -0.29
CLK4-204ENST00000520126 DLX4Q92988 240 aaPredicted RBP13.27□□□□□ -0.29
CLK4-204ENST00000520126 EEF1AKMT3Q96AZ1 226 aa13.27□□□□□ -0.29
CLK4-204ENST00000520126 SEC14L6B5MCN3 397 aa13.26□□□□□ -0.29
CLK4-204ENST00000520126 OVOL1O14753 267 aa13.26□□□□□ -0.29
CLK4-204ENST00000520126 P0C879 139 aa13.26□□□□□ -0.29
CLK4-204ENST00000520126 ANXA7P20073 488 aaKnown RBP13.26□□□□□ -0.29
CLK4-204ENST00000520126 BTCP35070 178 aa13.26□□□□□ -0.29
CLK4-204ENST00000520126 SNCAP37840 140 aa13.26□□□□□ -0.29
CLK4-204ENST00000520126 DEFA6Q01524 100 aa13.26□□□□□ -0.29
CLK4-204ENST00000520126 FHL3Q13643 280 aa13.26□□□□□ -0.29
CLK4-204ENST00000520126 RPEL1Q2QD12 228 aa13.26□□□□□ -0.29
CLK4-204ENST00000520126 ANKRD55Q3KP44 614 aa13.26□□□□□ -0.29
CLK4-204ENST00000520126 MZT2BQ6NZ67 158 aa13.26□□□□□ -0.29
CLK4-204ENST00000520126 ZNF343Q6P1L6 599 aa13.26□□□□□ -0.29
CLK4-204ENST00000520126 CLEC19AQ6UXS0 136 aa13.26□□□□□ -0.29
CLK4-204ENST00000520126 ZNF429Q86V71 674 aa13.26□□□□□ -0.29
CLK4-204ENST00000520126 IL22RA2Q969J5 263 aa13.26□□□□□ -0.29
CLK4-204ENST00000520126 MISP3Q96FF7 219 aa13.26□□□□□ -0.29
CLK4-204ENST00000520126 MCRIP2Q9BUT9 160 aaKnown RBP13.26□□□□□ -0.29
CLK4-204ENST00000520126 F11RQ9Y624 299 aaKnown RBP13.26□□□□□ -0.29
CLK4-204ENST00000520126 IGLV11-55A0A075B6I3 123 aa13.25□□□□□ -0.29
CLK4-204ENST00000520126 TRAV6A0A075B6T7 132 aa13.25□□□□□ -0.29
CLK4-204ENST00000520126 A0A0B4J2A0 478 aa13.25□□□□□ -0.29
CLK4-204ENST00000520126 FAM240BA0A1B0GVZ2 78 aa13.25□□□□□ -0.29
CLK4-204ENST00000520126 CEBPZOSA8MTT3 80 aa13.25□□□□□ -0.29
CLK4-204ENST00000520126 PPP5D1E7EU14 171 aa13.25□□□□□ -0.29
CLK4-204ENST00000520126 DUS4LO95620 317 aaKnown RBP13.25□□□□□ -0.29
CLK4-204ENST00000520126 HLA-AP01891 365 aaKnown RBP13.25□□□□□ -0.29
CLK4-204ENST00000520126 HOXB5P09067 269 aa13.25□□□□□ -0.29
CLK4-204ENST00000520126 SULT1A3P0DMM9 295 aa13.25□□□□□ -0.29
CLK4-204ENST00000520126 SULT1A4P0DMN0 295 aa13.25□□□□□ -0.29
CLK4-204ENST00000520126 ZP3P21754 424 aa13.25□□□□□ -0.29
CLK4-204ENST00000520126 HOXD3P31249 432 aaPredicted RBP13.25□□□□□ -0.29
CLK4-204ENST00000520126 NBEAL1Q6ZS30 2694 aa13.25□□□□□ -0.29
CLK4-204ENST00000520126 ZC4H2Q9NQZ6 224 aa13.25□□□□□ -0.29
CLK4-204ENST00000520126 SHPKQ9UHJ6 478 aa13.25□□□□□ -0.29
CLK4-204ENST00000520126 MFSD2BA6NFX1 497 aa13.24□□□□□ -0.29
CLK4-204ENST00000520126 PRB2P02812 416 aaPredicted RBP13.24□□□□□ -0.29
CLK4-204ENST00000520126 OR4E1P0C645 316 aa13.24□□□□□ -0.29
CLK4-204ENST00000520126 SAMD5Q5TGI4 173 aa13.24□□□□□ -0.29
CLK4-204ENST00000520126 OR2C3Q8N628 320 aa13.24□□□□□ -0.29
CLK4-204ENST00000520126 OR1S1Q8NH92 325 aa13.24□□□□□ -0.29
CLK4-204ENST00000520126 PINX1Q96BK5 328 aaKnown RBP13.24□□□□□ -0.29
CLK4-204ENST00000520126 C20orf85Q9H1P6 137 aa13.24□□□□□ -0.29
CLK4-204ENST00000520126 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.23□□□□□ -0.29
CLK4-204ENST00000520126 PIGBOS1A0A0B4J2F0 54 aa13.23□□□□□ -0.29
CLK4-204ENST00000520126 C9orf170A2RU37 121 aa13.23□□□□□ -0.29
CLK4-204ENST00000520126 SAP30O75446 220 aa13.23□□□□□ -0.29
CLK4-204ENST00000520126 UPK1BO75841 260 aa13.23□□□□□ -0.29
CLK4-204ENST00000520126 TCRBP04435 133 aa13.23□□□□□ -0.29
CLK4-204ENST00000520126 SYNJ2BPP57105 145 aa13.23□□□□□ -0.29
CLK4-204ENST00000520126 SPCS3P61009 180 aa13.23□□□□□ -0.29
CLK4-204ENST00000520126 UBE2MP61081 183 aaKnown RBP13.23□□□□□ -0.29
CLK4-204ENST00000520126 SMCO1Q147U7 214 aa13.23□□□□□ -0.29
CLK4-204ENST00000520126 UBAC2Q8NBM4 344 aa13.23□□□□□ -0.29
CLK4-204ENST00000520126 OR1L6Q8NGR2 347 aa13.23□□□□□ -0.29
CLK4-204ENST00000520126 CXorf58Q96LI9 332 aa13.23□□□□□ -0.29
CLK4-204ENST00000520126 GPR61Q9BZJ8 451 aa13.23□□□□□ -0.29
CLK4-204ENST00000520126 HEYLQ9NQ87 328 aaPredicted RBP13.23□□□□□ -0.29
CLK4-204ENST00000520126 DMRT1Q9Y5R6 373 aa13.23□□□□□ -0.29
CLK4-204ENST00000520126 CMYA5Q8N3K9 4069 aa13.23□□□□□ -0.29
CLK4-204ENST00000520126 FBN3Q75N90 2809 aa13.23□□□□□ -0.29
CLK4-204ENST00000520126 ARL3P36405 182 aa13.22□□□□□ -0.29
CLK4-204ENST00000520126 SUB1P53999 127 aaKnown RBP eCLIP13.22□□□□□ -0.29
CLK4-204ENST00000520126 MFAP2P55001 183 aa13.22□□□□□ -0.29
CLK4-204ENST00000520126 TATDN3Q17R31 274 aa13.22□□□□□ -0.29
CLK4-204ENST00000520126 C9orf66Q5T8R8 295 aa13.22□□□□□ -0.29
CLK4-204ENST00000520126 COQ8AQ8NI60 647 aa13.22□□□□□ -0.29
CLK4-204ENST00000520126 ENKURQ8TC29 256 aa13.22□□□□□ -0.29
CLK4-204ENST00000520126 NUDT15Q9NV35 164 aa13.22□□□□□ -0.29
CLK4-204ENST00000520126 TBC1D24Q9ULP9 559 aa13.22□□□□□ -0.29
CLK4-204ENST00000520126 TRBV7-1A0A0A6YYK4 115 aa13.21□□□□□ -0.29
CLK4-204ENST00000520126 OR2C1O95371 312 aa13.21□□□□□ -0.29
CLK4-204ENST00000520126 IGHV3-48P01763 117 aa13.21□□□□□ -0.29
CLK4-204ENST00000520126 CLEC3BP05452 202 aa13.21□□□□□ -0.29
CLK4-204ENST00000520126 GPR183P32249 361 aa13.21□□□□□ -0.29
CLK4-204ENST00000520126 DHRS2Q13268 280 aa13.21□□□□□ -0.29
CLK4-204ENST00000520126 BEAN1Q3B7T3 259 aa13.21□□□□□ -0.29
CLK4-204ENST00000520126 Q56UQ5 140 aa13.21□□□□□ -0.29
CLK4-204ENST00000520126 LYG2Q86SG7 212 aa13.21□□□□□ -0.29
CLK4-204ENST00000520126 UXS1Q8NBZ7 420 aa13.21□□□□□ -0.29
CLK4-204ENST00000520126 OR52B4Q8NGK2 314 aa13.21□□□□□ -0.29
CLK4-204ENST00000520126 OR1P1Q8NH06 330 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms