RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 HLA-DMAP28067 261 aa6.37□□□□□ -1.39
PABPC1-213ENST00000519848 ARL6IP1Q15041 203 aa6.37□□□□□ -1.39
PABPC1-213ENST00000519848 MLANAQ16655 118 aa6.37□□□□□ -1.39
PABPC1-213ENST00000519848 DEFB135Q30KP9 77 aa6.37□□□□□ -1.39
PABPC1-213ENST00000519848 FAM209BQ5JX69 171 aa6.37□□□□□ -1.39
PABPC1-213ENST00000519848 DHRS11Q6UWP2 260 aa6.37□□□□□ -1.39
PABPC1-213ENST00000519848 OR4D10Q8NGI6 311 aa6.37□□□□□ -1.39
PABPC1-213ENST00000519848 IL17DQ8TAD2 202 aa6.37□□□□□ -1.39
PABPC1-213ENST00000519848 GPX8Q8TED1 209 aa6.37□□□□□ -1.39
PABPC1-213ENST00000519848 LINC00476Q8WZB0 136 aa6.37□□□□□ -1.39
PABPC1-213ENST00000519848 SEC22AQ96IW7 307 aa6.37□□□□□ -1.39
PABPC1-213ENST00000519848 GGTLC1Q9BX51 225 aa6.37□□□□□ -1.39
PABPC1-213ENST00000519848 YTHDF1Q9BYJ9 559 aaKnown RBP6.37□□□□□ -1.39
PABPC1-213ENST00000519848 TMEM14BQ9NUH8 114 aa6.37□□□□□ -1.39
PABPC1-213ENST00000519848 TECRQ9NZ01 308 aaKnown RBP6.37□□□□□ -1.39
PABPC1-213ENST00000519848 COMMD9Q9P000 198 aa6.37□□□□□ -1.39
PABPC1-213ENST00000519848 F11RQ9Y624 299 aaKnown RBP6.37□□□□□ -1.39
PABPC1-213ENST00000519848 HERC2O95714 4834 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 A0A0A6YYH2 397 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 TRBV7-1A0A0A6YYK4 115 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 DPPA5A6NC42 116 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 A6NJ64 397 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 C15orf61A6NNL5 157 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 HPGDSO60760 199 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 SCGNO76038 276 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 SLC22A5O76082 557 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 CTSGP08311 255 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 ELK1P19419 428 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 F2RP25116 425 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 PTBP1P26599 531 aaKnown RBP eCLIP6.36□□□□□ -1.396e-18■□□□□ 8
PABPC1-213ENST00000519848 VBP1P61758 197 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 PMS2P11Q13670 270 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 TATDN3Q17R31 274 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 UBE2NLQ5JXB2 153 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 SLC25A42Q86VD7 318 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 APRG1Q8IVJ8 170 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 OR52B4Q8NGK2 314 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 DGCR14Q96DF8 476 aaKnown RBP6.36□□□□□ -1.39
PABPC1-213ENST00000519848 RNF2Q99496 336 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 FUNDC2Q9BWH2 189 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 HINT2Q9BX68 163 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 SLC2A8Q9NY64 477 aa6.36□□□□□ -1.39
PABPC1-213ENST00000519848 KMT2AQ03164 3969 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 CTSDP07339 412 aaPredicted RBP6.35□□□□□ -1.39
PABPC1-213ENST00000519848 TRAPPC2P0DI81 140 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 TRAPPC2BP0DI82 140 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 DEFA4P12838 97 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 RPL35AP18077 110 aaKnown RBP6.35□□□□□ -1.39
PABPC1-213ENST00000519848 TMEM69Q5SWH9 247 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 FAM90A2PQ658T7 463 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 PLET1Q6UQ28 207 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 GSG1LQ6UXU4 331 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 LYG2Q86SG7 212 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 TBC1D26Q86UD7 250 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 SNX29P2Q8IUI4 249 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 RPP25LQ8N5L8 163 aaKnown RBP6.35□□□□□ -1.39
PABPC1-213ENST00000519848 ZBTB34Q8NCN2 500 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 DMBX1Q8NFW5 382 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 SLC25A46Q96AG3 418 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 MISP3Q96FF7 219 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 TP53RKQ96S44 253 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 COMMD5Q9GZQ3 224 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 MIXL1Q9H2W2 232 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 FNDC4Q9H6D8 234 aaPredicted RBP6.35□□□□□ -1.39
PABPC1-213ENST00000519848 IFT46Q9NQC8 304 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 OR51B2Q9Y5P1 312 aa6.35□□□□□ -1.39
PABPC1-213ENST00000519848 AGRNO00468 2067 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 LOC102724200A0A096LPH7 203 aaPredicted RBP6.34□□□□□ -1.39
PABPC1-213ENST00000519848 A0A1B0GU03 582 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 CHEK1O14757 476 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 TSPAN4O14817 238 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 DEDDO75618 318 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 GIG44P09565 113 aaPredicted RBP6.34□□□□□ -1.39
PABPC1-213ENST00000519848 HIST1H1BP16401 226 aaKnown RBP6.34□□□□□ -1.39
PABPC1-213ENST00000519848 HERV-K104P61576 105 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 CATR1Q13166 79 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 CTF1Q16619 201 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 SLC25A24Q6NUK1 477 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 FAAP20Q6NZ36 180 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 LHFPL1Q86WI0 220 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 OR2C3Q8N628 320 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 UBAC2Q8NBM4 344 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 OR1L6Q8NGR2 347 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 OR1L8Q8NGR8 309 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 OR5H2Q8NGV7 314 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 OR5B3Q8NH48 314 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 LHFPL5Q8TAF8 219 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 VN1R17PQ8TDU5 208 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 TMEM170AQ8WVE7 144 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 LSM10Q969L4 123 aaKnown RBP6.34□□□□□ -1.39
PABPC1-213ENST00000519848 CXorf58Q96LI9 332 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 C20orf173Q96LM9 149 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 C20orf24Q9BUV8 137 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 C5orf66Q9H5L9 145 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 MAP6D1Q9H9H5 199 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 DAZ1Q9NQZ3 744 aaKnown RBP6.34□□□□□ -1.39
PABPC1-213ENST00000519848 C21orf62Q9NYP8 219 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 MRPL27Q9P0M9 148 aaKnown RBP6.34□□□□□ -1.39
PABPC1-213ENST00000519848 KLK11Q9UBX7 282 aa6.34□□□□□ -1.39
PABPC1-213ENST00000519848 VPS13DQ5THJ4 4388 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms