RNA–Protein interactions for RNA: ENST00000519363.1

PABPC1-210, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-210ENST00000519363 SMIM3Q9BZL3 60 aa11.87□□□□□ -0.51
PABPC1-210ENST00000519363 ARV1Q9H2C2 271 aa11.87□□□□□ -0.51
PABPC1-210ENST00000519363 WFDC1Q9HC57 220 aa11.87□□□□□ -0.51
PABPC1-210ENST00000519363 SOX21Q9Y651 276 aaPredicted RBP11.87□□□□□ -0.51
PABPC1-210ENST00000519363 SONP18583 2426 aaKnown RBP11.86□□□□□ -0.51
PABPC1-210ENST00000519363 PRSS46E5RG02 174 aa11.86□□□□□ -0.51
PABPC1-210ENST00000519363 M0QZK8 103 aa11.86□□□□□ -0.51
PABPC1-210ENST00000519363 IFNA7P01567 189 aa11.86□□□□□ -0.51
PABPC1-210ENST00000519363 RNASE2P10153 161 aaKnown RBP11.86□□□□□ -0.51
PABPC1-210ENST00000519363 GNB1P62873 340 aa11.86□□□□□ -0.51
PABPC1-210ENST00000519363 DEFB112Q30KQ8 113 aa11.86□□□□□ -0.51
PABPC1-210ENST00000519363 PVRIGQ6DKI7 326 aa11.86□□□□□ -0.51
PABPC1-210ENST00000519363 BAP18Q8IXM2 172 aa11.86□□□□□ -0.51
PABPC1-210ENST00000519363 C5orf56Q8N8D9 126 aa11.86□□□□□ -0.51
PABPC1-210ENST00000519363 ZNF680Q8NEM1 530 aa11.86□□□□□ -0.51
PABPC1-210ENST00000519363 OR10P1Q8NGE3 313 aa11.86□□□□□ -0.51
PABPC1-210ENST00000519363 OR5R1Q8NH85 324 aa11.86□□□□□ -0.51
PABPC1-210ENST00000519363 RASL11BQ9BPW5 248 aa11.86□□□□□ -0.51
PABPC1-210ENST00000519363 GGACTQ9BVM4 153 aa11.86□□□□□ -0.51
PABPC1-210ENST00000519363 PARD6GQ9BYG4 376 aaPredicted RBP11.86□□□□□ -0.51
PABPC1-210ENST00000519363 CNIH1O95406 144 aa11.85□□□□□ -0.51
PABPC1-210ENST00000519363 SNCAP37840 140 aa11.85□□□□□ -0.51
PABPC1-210ENST00000519363 CLINT1Q14677 625 aa11.85□□□□□ -0.51
PABPC1-210ENST00000519363 FXYD3Q14802 87 aa11.85□□□□□ -0.51
PABPC1-210ENST00000519363 VWC2Q2TAL6 325 aa11.85□□□□□ -0.51
PABPC1-210ENST00000519363 OR8G2PQ6IF36 304 aa11.85□□□□□ -0.51
PABPC1-210ENST00000519363 ETV3LQ6ZN32 361 aa11.85□□□□□ -0.51
PABPC1-210ENST00000519363 BCL6BQ8N143 479 aaPredicted RBP11.85□□□□□ -0.51
PABPC1-210ENST00000519363 LILRB2Q8N423 598 aa11.85□□□□□ -0.51
PABPC1-210ENST00000519363 ARPC1AQ92747 370 aa11.85□□□□□ -0.51
PABPC1-210ENST00000519363 TMEM147Q9BVK8 224 aa11.85□□□□□ -0.51
PABPC1-210ENST00000519363 TMEM160Q9NX00 188 aa11.85□□□□□ -0.51
PABPC1-210ENST00000519363 IGHV7-81A0A0B4J1V7 117 aa11.84□□□□□ -0.51
PABPC1-210ENST00000519363 MDFIC2A0A1B0GVS7 189 aa11.84□□□□□ -0.51
PABPC1-210ENST00000519363 FNDC10F2Z333 226 aa11.84□□□□□ -0.51
PABPC1-210ENST00000519363 CFDP00746 253 aaPredicted RBP11.84□□□□□ -0.51
PABPC1-210ENST00000519363 OR13C7P0DN81 318 aa11.84□□□□□ -0.51
PABPC1-210ENST00000519363 SUB1P53999 127 aaKnown RBP eCLIP11.84□□□□□ -0.51
PABPC1-210ENST00000519363 CX3CL1P78423 397 aa11.84□□□□□ -0.51
PABPC1-210ENST00000519363 DLK1P80370 383 aa11.84□□□□□ -0.51
PABPC1-210ENST00000519363 NDPQ00604 133 aa11.84□□□□□ -0.51
PABPC1-210ENST00000519363 EXOSC2Q13868 293 aaKnown RBP11.84□□□□□ -0.51
PABPC1-210ENST00000519363 GINS3Q9BRX5 216 aa11.84□□□□□ -0.51
PABPC1-210ENST00000519363 PAIP2BQ9ULR5 123 aaKnown RBP11.84□□□□□ -0.51
PABPC1-210ENST00000519363 IFNA4P05014 189 aa11.83□□□□□ -0.52
PABPC1-210ENST00000519363 AREGP15514 252 aa11.83□□□□□ -0.52
PABPC1-210ENST00000519363 IER3P46695 156 aa11.83□□□□□ -0.52
PABPC1-210ENST00000519363 EIF5AL1Q6IS14 154 aaKnown RBP11.83□□□□□ -0.52
PABPC1-210ENST00000519363 SPNS3Q6ZMD2 512 aa11.83□□□□□ -0.52
PABPC1-210ENST00000519363 TMEM219Q86XT9 240 aa11.83□□□□□ -0.52
PABPC1-210ENST00000519363 OR1P1Q8NH06 330 aa11.83□□□□□ -0.52
PABPC1-210ENST00000519363 RNASEH2CQ8TDP1 164 aaKnown RBP11.83□□□□□ -0.52
PABPC1-210ENST00000519363 SCARB1Q8WTV0 552 aa11.83□□□□□ -0.52
PABPC1-210ENST00000519363 SSMEM1Q8WWF3 244 aa11.83□□□□□ -0.52
PABPC1-210ENST00000519363 P2RX4Q99571 388 aa11.83□□□□□ -0.52
PABPC1-210ENST00000519363 UQCC1Q9NVA1 299 aa11.83□□□□□ -0.52
PABPC1-210ENST00000519363 UBQLN2Q9UHD9 624 aa11.83□□□□□ -0.52
PABPC1-210ENST00000519363 BTBD17A6NE02 478 aa11.82□□□□□ -0.52
PABPC1-210ENST00000519363 TSPAN9O75954 239 aa11.82□□□□□ -0.52
PABPC1-210ENST00000519363 IFNA5P01569 189 aa11.82□□□□□ -0.52
PABPC1-210ENST00000519363 AMY1AP04745 511 aa11.82□□□□□ -0.52
PABPC1-210ENST00000519363 HNF1AP20823 631 aa11.82□□□□□ -0.52
PABPC1-210ENST00000519363 Q6YL49 198 aa11.82□□□□□ -0.52
PABPC1-210ENST00000519363 ABHD5Q8WTS1 349 aa11.82□□□□□ -0.52
PABPC1-210ENST00000519363 ZNF48Q96MX3 618 aaPredicted RBP11.82□□□□□ -0.52
PABPC1-210ENST00000519363 F11RQ9Y624 299 aaKnown RBP11.82□□□□□ -0.52
PABPC1-210ENST00000519363 ZFHX3Q15911 3703 aa11.82□□□□□ -0.52
PABPC1-210ENST00000519363 NPIPB5A8MRT5 1133 aa11.81□□□□□ -0.52
PABPC1-210ENST00000519363 CORTO00230 105 aa11.81□□□□□ -0.52
PABPC1-210ENST00000519363 IGHV4-59P01825 116 aa11.81□□□□□ -0.52
PABPC1-210ENST00000519363 CRYGCP07315 174 aa11.81□□□□□ -0.52
PABPC1-210ENST00000519363 CTRB1P17538 263 aa11.81□□□□□ -0.52
PABPC1-210ENST00000519363 MDKP21741 143 aaPredicted RBP11.81□□□□□ -0.52
PABPC1-210ENST00000519363 CRIP2P52943 208 aaPredicted RBP11.81□□□□□ -0.52
PABPC1-210ENST00000519363 LY6EQ16553 131 aa11.81□□□□□ -0.52
PABPC1-210ENST00000519363 CTRB2Q6GPI1 263 aa11.81□□□□□ -0.52
PABPC1-210ENST00000519363 OR1L6Q8NGR2 347 aa11.81□□□□□ -0.52
PABPC1-210ENST00000519363 C22orf15Q8WYQ4 148 aa11.81□□□□□ -0.52
PABPC1-210ENST00000519363 GNPNAT1Q96EK6 184 aaPredicted RBP11.81□□□□□ -0.52
PABPC1-210ENST00000519363 HSPB9Q9BQS6 159 aa11.81□□□□□ -0.52
PABPC1-210ENST00000519363 YAE1D1Q9NRH1 226 aa11.81□□□□□ -0.52
PABPC1-210ENST00000519363 VPREB3Q9UKI3 123 aa11.81□□□□□ -0.52
PABPC1-210ENST00000519363 UBE2L5PA0A1B0GUS4 154 aa11.8□□□□□ -0.52
PABPC1-210ENST00000519363 SEC11BP0C7V7 166 aa11.8□□□□□ -0.52
PABPC1-210ENST00000519363 SPP1P10451 314 aa11.8□□□□□ -0.52
PABPC1-210ENST00000519363 EGR2P11161 476 aaPredicted RBP11.8□□□□□ -0.52
PABPC1-210ENST00000519363 GPX4P36969 197 aaPredicted RBP11.8□□□□□ -0.52
PABPC1-210ENST00000519363 SRP14P37108 136 aaKnown RBP11.8□□□□□ -0.52
PABPC1-210ENST00000519363 SCGB2A2Q13296 93 aa11.8□□□□□ -0.52
PABPC1-210ENST00000519363 ASPHD1Q5U4P2 390 aa11.8□□□□□ -0.52
PABPC1-210ENST00000519363 ALKAL2Q6UX46 152 aa11.8□□□□□ -0.52
PABPC1-210ENST00000519363 TTC9CQ8N5M4 171 aa11.8□□□□□ -0.52
PABPC1-210ENST00000519363 TMEM86BQ8N661 226 aa11.8□□□□□ -0.52
PABPC1-210ENST00000519363 SGMS2Q8NHU3 365 aa11.8□□□□□ -0.52
PABPC1-210ENST00000519363 CACNG8Q8WXS5 425 aa11.8□□□□□ -0.52
PABPC1-210ENST00000519363 TMEM68Q96MH6 324 aa11.8□□□□□ -0.52
PABPC1-210ENST00000519363 WDR61Q9GZS3 305 aaKnown RBP11.8□□□□□ -0.52
PABPC1-210ENST00000519363 WDR83OSQ9Y284 106 aa11.8□□□□□ -0.52
PABPC1-210ENST00000519363 FBXO7Q9Y3I1 522 aa11.8□□□□□ -0.52
PABPC1-210ENST00000519363 MPDU1O75352 247 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms